Evaluating sharpness functions for automated scanning electron microscopy

Fast and reliable autofocus techniques are an important topic for automated scanning electron microscopy. In this paper, different autofocus techniques are discussed and applied to a variety of experimental through‐focus series of scanning electron microscopy images with different geometries. The procedure of quality evaluation is described, and for a variety of scanning electron microscope samples it is demonstrated that techniques based on image derivatives and Fourier transforms are in general better than statistical, intensity and histogram‐based techniques. Further, it is shown that varying of an extra parameter can dramatically increase quality of an autofocus technique.

[1]  Bradley J Nelson,et al.  Autofocusing in computer microscopy: Selecting the optimal focus algorithm , 2004, Microscopy research and technique.

[2]  K. H. Ong,et al.  A robust focusing and astigmatism correction method for the scanning electron microscope , 2006 .

[3]  Christopher Batten Autofocusing and Astigmatism Correction in the Scanning Electron Microscope , 2000 .

[4]  K. C. A. Smith,et al.  An automatic focusing and astigmatism correction system for the SEM and CTEM , 1982 .

[5]  Shree K. Nayar,et al.  Shape from Focus , 1994, IEEE Trans. Pattern Anal. Mach. Intell..

[6]  D. Vollath The influence of the scene parameters and of noise on the behaviour of automatic focusing algorithms , 1988 .

[7]  D. Vollath Automatic focusing by correlative methods , 1987 .

[8]  C. Ortiz de Solórzano,et al.  Evaluation of autofocus functions in molecular cytogenetic analysis , 1997, Journal of microscopy.

[9]  J. F. Brenner,et al.  An automated microscope for cytologic research a preliminary evaluation. , 1976, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[10]  X Y Liu,et al.  Dynamic evaluation of autofocusing for automated microscopic analysis of blood smear and pap smear , 2007, Journal of microscopy.

[11]  R.M.M. Mattheij,et al.  Iterative Autofocus Algorithms for Scanning Electron Microscopy , 2009, Microscopy and Microanalysis.

[12]  Michael T. Postek,et al.  Image sharpness measurement in scanning electron microscopy—part I , 2006 .