A novel c.2T > C mutation of the KDM5C/JARID1C gene in one large family with X-linked intellectual disability.

Mutations in the KDM5C gene (lysine (K)-specific demethylase 5C gene; also known as JARID1C and SMCX; MIM 314690) were recently associated with X-linked intellectual disability (XLID). To date only two case reports and five studies that screen for mutations in the KDM5C gene have been published, with 21 mutations reported. Herein we present a large family with XLID caused by a novel mutation c.2T > C in the start codon of the KDM5C gene, presumably leading to loss of gene translation. Six sibs out of seven (two sons and four sisters) and their mother carry this mutation. Two affected males presented the distinctive clinical phenotype, characterized by moderate short stature, clumsy gait, ataxia, increased muscle tone and brisk tendon reflexes. They constantly bore a happy and smiling facial expression, with a protruding tongue. We hereby offer the first thorough description of five affected females with the KDM5C gene mutation. Most frequent clinical features were short stature, facial dysmorphism and developmental problems. X-chromosome inactivation study showed completely skewed inactivation pattern of mutation-carrying chromosome in all affected female patients.

[1]  K. Õunap,et al.  The screening of SLC6A8 deficiency among Estonian families with X-linked mental retardation , 2010, Journal of Inherited Metabolic Disease.

[2]  Emmanouil T Dermitzakis,et al.  Large-Scale Population Study of Human Cell Lines Indicates that Dosage Compensation Is Virtually Complete , 2007, PLoS genetics.

[3]  H. Ropers,et al.  X-linked mental retardation , 2005, Nature Reviews Genetics.

[4]  A. Rao,et al.  The histone H3K4 demethylase SMCX links REST target genes to X-linked mental retardation , 2007, Nature.

[5]  Andrew Menzies,et al.  A systematic, large-scale resequencing screen of X-chromosome coding exons in mental retardation , 2009, Nature Genetics.

[6]  R. Reinhardt,et al.  Novel JARID1C/SMCX mutations in patients with X‐linked mental retardation , 2006, Human mutation.

[7]  P. Chiurazzi,et al.  XLMR genes: update 2007 , 2008, European Journal of Human Genetics.

[8]  I. Järvelä,et al.  MECP2 mutation analysis in patients with mental retardation , 2005, American journal of medical genetics. Part A.

[9]  S. Henikoff,et al.  Accounting for human polymorphisms predicted to affect protein function. , 2002, Genome research.

[10]  J. Gécz,et al.  A distinctive gene expression fingerprint in mentally retarded male patients reflects disease-causing defects in the histone demethylase KDM5C , 2010, PathoGenetics.

[11]  M. Orozco,et al.  Sequence‐based prediction of pathological mutations , 2004, Proteins.

[12]  C. Disteche,et al.  Sex-Specific Expression of the X-Linked Histone Demethylase Gene Jarid1c in Brain , 2008, PloS one.

[13]  Hanlin Gao,et al.  A novel mutation in JARID1C/SMCX in a patient with autism spectrum disorder (ASD) , 2008, American journal of medical genetics. Part A.

[14]  V. des Portes,et al.  High frequency of creatine deficiency syndromes in patients with unexplained mental retardation , 2006, Neurology.

[15]  P. Bork,et al.  Human non-synonymous SNPs: server and survey. , 2002, Nucleic acids research.

[16]  M. Dubé,et al.  No evidence that skewing of X chromosome inactivation patterns is transmitted to offspring in humans. , 2008, The Journal of clinical investigation.

[17]  J. Gécz,et al.  Mutations in the JARID1C gene, which is involved in transcriptional regulation and chromatin remodeling, cause X-linked mental retardation. , 2005, American journal of human genetics.

[18]  G. G. Stokes "J." , 1890, The New Yale Book of Quotations.

[19]  M. Ribeiro,et al.  A novel nonsense mutation in KDM5C/JARID1C gene causing intellectual disability, short stature and speech delay , 2011, Neuroscience Letters.

[20]  H. Ropers,et al.  High prevalence of SLC6A8 deficiency in X-linked mental retardation. , 2004, American journal of human genetics.

[21]  C. Badenas,et al.  A novel mutation in JARID1C gene associated with mental retardation , 2006, European Journal of Human Genetics.

[22]  Maite Huarte,et al.  The X-Linked Mental Retardation Gene SMCX/JARID1C Defines a Family of Histone H3 Lysine 4 Demethylases , 2007, Cell.

[23]  J. Gécz,et al.  Identification and characterization of two novel JARID1C mutations: suggestion of an emerging genotype–phenotype correlation , 2010, European Journal of Human Genetics.

[24]  Gebräuchliche Fertigarzneimittel,et al.  V , 1893, Therapielexikon Neurologie.

[25]  R. Stevenson,et al.  Mutations in JARID1C are associated with X-linked mental retardation, short stature and hyperreflexia , 2008, Journal of Medical Genetics.

[26]  K. Helin,et al.  RBP2 Belongs to a Family of Demethylases, Specific for Tri-and Dimethylated Lysine 4 on Histone 3 , 2007, Cell.