GenoBase: comprehensive resource database of Escherichia coli
暂无分享,去创建一个
M. Gribskov | H. Mori | D. Kihara | K. Rudd | B. Wanner | K. Nakahigashi | Natsuko Yamamoto | Rikiya Takeuchi | B. Bochner | Shigeki Tanishima | T. Conway | Sivasundaram Suharnan | Wataru Nomura | Yuta Otsuka | T. Nakayashiki | Y. Tohsato | Ai Muto | Hitomi Dose | K. Nakamura | Chihiro Okada | G. Aref | Walid | Motokazu Ishikawa | S. Tanishima
[1] Barry L. Wanner,et al. Unprecedented High-Resolution View of Bacterial Operon Architecture Revealed by RNA Sequencing , 2014, mBio.
[2] Takeyuki Tamura,et al. Colony-live — a high-throughput method for measuring microbial colony growth kinetics— reveals diverse growth effects of gene knockouts in Escherichia coli , 2014, BMC Microbiology.
[3] Pierluigi Mauri,et al. Dissecting Escherichia coli Outer Membrane Biogenesis Using Differential Proteomics , 2014, PloS one.
[4] P. Uetz,et al. The binary protein-protein interaction landscape of Escherichia coli , 2014, Nature Biotechnology.
[5] Anushya Muruganujan,et al. PortEco: a resource for exploring bacterial biology through high-throughput data and analysis tools , 2013, Nucleic Acids Res..
[6] Jindan Zhou,et al. EcoGene 3.0 , 2012, Nucleic Acids Res..
[7] Peter D. Karp,et al. EcoCyc: fusing model organism databases with systems biology , 2012, Nucleic Acids Res..
[8] Yukako Tohsato,et al. Environmental dependency of gene knockouts on phenotype microarray analysis in Escherichia coli. , 2010, Journal of bioinformatics and computational biology.
[9] Peter Uetz,et al. The Escherichia coli K-12 ORFeome: a resource for comparative molecular microbiology , 2010, BMC Genomics.
[10] T. Hübschmann,et al. Advanced tool for characterization of microbial cultures by combining cytomics and proteomics , 2010, Applied Microbiology and Biotechnology.
[11] Masaru Tomita,et al. Update on the Keio collection of Escherichia coli single-gene deletion mutants , 2009, Molecular systems biology.
[12] H. Mori,et al. Systematic phenome analysis of Escherichia coli multiple-knockout mutants reveals hidden reactions in central carbon metabolism , 2009, Molecular systems biology.
[13] Mithilesh Mishra,et al. Faculty Opinions recommendation of High-throughput, quantitative analyses of genetic interactions in E. coli. , 2008 .
[14] Huiming Ding,et al. eSGA: E. coli synthetic genetic array analysis , 2008, Nature Methods.
[15] Yukiko Yamazaki,et al. Profiling of Escherichia coli Chromosome database. , 2008, Methods in molecular biology.
[16] Yukako Tohsato,et al. Phenotype profiling of single gene deletion mutants of E. coli using Biolog technology. , 2008, Genome informatics. International Conference on Genome Informatics.
[17] Chris Mungall,et al. A Chado case study: an ontology-based modular schema for representing genome-associated biological information , 2007, ISMB/ECCB.
[18] S. Kanaya,et al. Large-scale identification of protein-protein interaction of Escherichia coli K-12. , 2006, Genome research.
[19] H. Mori,et al. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection , 2006, Molecular systems biology.
[20] Koji Hayashi,et al. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110 , 2006, Molecular systems biology.
[21] Monica Riley,et al. Escherichia coli K-12: a cooperatively developed annotation snapshot—2005 , 2006, Nucleic acids research.
[22] Aaron E. Darling,et al. ASAP: a resource for annotating, curating, comparing, and disseminating genomic data , 2005, Nucleic Acids Res..
[23] Peili Zhang,et al. Using Chado to store genome annotation data. , 2006, Current protocols in bioinformatics.
[24] H. Mori,et al. Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. , 2006, DNA research : an international journal for rapid publication of reports on genes and genomes.
[25] L. Chao,et al. The Coupon Collector and the Suppressor Mutation , 2005, Genetics.
[26] B. Wanner,et al. Phenotype MicroArray Analysis of Escherichia coli K-12 Mutants with Deletions of All Two-Component Systems , 2003, Journal of bacteriology.
[27] B. Bochner. Innovations: New technologies to assess genotype–phenotype relationships , 2003, Nature Reviews Genetics.
[28] R.. Tandem Genetic Duplications in Salmonella typhimurium : Amplification of the Histidine Operon , 2003 .
[29] Michael K. Gilson,et al. ASAP, a systematic annotation package for community analysis of genomes , 2003, Nucleic Acids Res..
[30] Ronald W. Davis,et al. Functional profiling of the Saccharomyces cerevisiae genome , 2002, Nature.
[31] B. Bochner,et al. Phenotype microarrays for high-throughput phenotypic testing and assay of gene function. , 2001, Genome research.
[32] B. Wanner,et al. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[33] Kenneth E. Rudd,et al. Linkage Map of Escherichia coli K-12, Edition 10: The Physical Map , 1998, Microbiology and Molecular Biology Reviews.
[34] N. W. Davis,et al. The complete genome sequence of Escherichia coli K-12. , 1997, Science.
[35] K. Isono,et al. Construction of a contiguous 874-kb sequence of the Escherichia coli -K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features. , 1997, DNA research : an international journal for rapid publication of reports on genes and genomes.
[36] K. Isono,et al. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. , 1996, DNA research : an international journal for rapid publication of reports on genes and genomes.
[37] K. Isono,et al. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. , 1996, DNA research : an international journal for rapid publication of reports on genes and genomes.
[38] H. Mori,et al. Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region. , 1994, Nucleic acids research.
[39] Nobuyuki Fujita,et al. Systematic sequencing of the Escherichia coli genome: analysis of the 0- 2.4 min region , 1992, Nucleic Acids Res..
[40] K. Isono,et al. The physical map of the whole E. coli chromosome: Application of a new strategy for rapid analysis and sorting of a large genomic library , 1987, Cell.
[41] J. Roth,et al. Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between rRNA (rrn) cistrons. , 1981, Proceedings of the National Academy of Sciences of the United States of America.
[42] J R Roth,et al. Gene duplication in bacteria: alteration of gene dosage by sister-chromosome exchanges. , 1979, Cold Spring Harbor symposia on quantitative biology.
[43] J R Roth,et al. Tandem chromosomal duplications in Salmonella typhimurium: fusion of histidine genes to novel promoters. , 1978, Journal of molecular biology.
[44] J R Roth,et al. Tandem genetic duplications in phage and bacteria. , 1977, Annual review of microbiology.
[45] J R Roth,et al. Tandem duplications of the histidine operon observed following generalized transduction in Salmonella typhimurium. , 1976, Journal of molecular biology.
[46] P Berg,et al. Transduction of Merodiploidy: Induced Duplication of Recipient Genes , 1969, Journal of bacteriology.
[47] P Berg,et al. Instability of a missense suppressor resulting from a duplication of genetic material. , 1969, Journal of molecular biology.
[48] S. Brenner,et al. An Unstable Intermediate Carrying Information from Genes to Ribosomes for Protein Synthesis , 1961, Nature.