Recent advances in optical tweezers.
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Carlos Bustamante | Jeffrey R Moffitt | Yann R Chemla | Steven B Smith | C. Bustamante | J. Moffitt | Y. Chemla | Steven B. Smith
[1] Carlos Bustamante,et al. Grabbing the cat by the tail: manipulating molecules one by one , 2000, Nature Reviews Molecular Cell Biology.
[2] Masasuke Yoshida,et al. ATP synthase — a marvellous rotary engine of the cell , 2001, Nature Reviews Molecular Cell Biology.
[3] S. Weiss. Fluorescence spectroscopy of single biomolecules. , 1999, Science.
[4] Cees Dekker,et al. Direct force measurements on DNA in a solid-state nanopore , 2006 .
[5] E. Isacoff,et al. Light-activated ion channels for remote control of neuronal firing , 2004, Nature Neuroscience.
[6] Jan Löwe,et al. Double-stranded DNA translocation: structure and mechanism of hexameric FtsK. , 2006, Molecular cell.
[7] Liedewij Laan,et al. Assembly dynamics of microtubules at molecular resolution , 2006, Nature.
[8] H. Rubinsztein-Dunlop,et al. Optical application and measurement of torque on microparticles of isotropic nonabsorbing material , 2003, physics/0309122.
[9] D. Grier. A revolution in optical manipulation , 2003, Nature.
[10] G J Brakenhoff,et al. Micromanipulation by "multiple" optical traps created by a single fast scanning trap integrated with the bilateral confocal scanning laser microscope. , 1993, Cytometry.
[11] Cyril Claudet,et al. Magneto-optical tweezers built around an inverted microscope. , 2005, Applied optics.
[12] T. Ha,et al. A survey of single-molecule techniques in chemical biology. , 2007, ACS chemical biology.
[13] Lene B. Oddershede,et al. Unintended filtering in a typical photodiode detection system for optical tweezers , 2003 .
[14] Frederick Sachs,et al. Maximum likelihood estimation of molecular motor kinetics from staircase dwell-time sequences. , 2006, Biophysical journal.
[15] H. Rubinsztein-Dunlop,et al. Optical angular-momentum transfer to trapped absorbing particles. , 1996, Physical review. A, Atomic, molecular, and optical physics.
[16] Norman R. Heckenberg,et al. Optical measurement of microscopic torques , 2001 .
[17] P. Ormos,et al. Direct measurement of torque in an optical trap and its application to double-strand DNA. , 2006, Physical review letters.
[18] Ronald J. Baskin,et al. A Molecular Throttle The Recombination Hotspot χ Controls DNA Translocation by the RecBCD Helicase , 2003, Cell.
[19] Christoph F. Schmidt,et al. Direct observation of kinesin stepping by optical trapping interferometry , 1993, Nature.
[20] Omar A Saleh,et al. Fast, DNA‐sequence independent translocation by FtsK in a single‐molecule experiment , 2004, The EMBO journal.
[21] Steven M Block,et al. Passive all-optical force clamp for high-resolution laser trapping. , 2005, Physical review letters.
[22] Marileen Dogterom,et al. Direct measurement of force generation by actin filament polymerization using an optical trap , 2007, Proceedings of the National Academy of Sciences.
[23] Paul R Selvin,et al. New fluorescent tools for watching nanometer-scale conformational changes of single molecules. , 2007, Annual review of biophysics and biomolecular structure.
[24] I. Tinoco,et al. Equilibrium Information from Nonequilibrium Measurements in an Experimental Test of Jarzynski's Equality , 2002, Science.
[25] Michael D. Stone,et al. Chirality sensing by Escherichia coli topoisomerase IV and the mechanism of type II topoisomerases , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[26] William H Guilford,et al. Creating multiple time-shared laser traps with simultaneous displacement detection using digital signal processing hardware. , 2004, Analytical biochemistry.
[27] Marcelo Nöllmann,et al. Thirty years of Escherichia coli DNA gyrase: from in vivo function to single-molecule mechanism. , 2007, Biochimie.
[28] Carlos Bustamante,et al. Supplemental data for : The Bacteriophage ø 29 Portal Motor can Package DNA Against a Large Internal Force , 2001 .
[29] P Bartlett,et al. Direct measurements of colloidal friction coefficients. , 2001, Physical review. E, Statistical, nonlinear, and soft matter physics.
[30] Roman Tuma,et al. Step length measurement--theory and simulation for tethered bead constant-force single molecule assay. , 2007, Biophysical journal.
[31] David A. Sivak,et al. Controlling DNA capture and propagation through artificial nanopores. , 2007, Nano letters.
[32] K. Schulten,et al. Fluorescence-Force Spectroscopy Maps Two-Dimensional Reaction Landscape of the Holliday Junction , 2007, Science.
[33] H D Ou-Yang,et al. Correlated motions of two hydrodynamically coupled particles confined in separate quadratic potential wells. , 2002, Physical review. E, Statistical, nonlinear, and soft matter physics.
[34] A. Ashkin,et al. Optical trapping and manipulation of neutral particles using lasers. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[35] E. Furst,et al. Applications of laser tweezers in complex fluid rheology , 2005 .
[36] S. Block,et al. Construction of multiple-beam optical traps with nanometer-resolution position sensing , 1996 .
[37] J Ricardo Arias-Gonzalez,et al. Exploring mechanochemical processes in the cell with optical tweezers , 2006, Biology of the cell.
[38] Paul Matsudaira,et al. Detecting force-induced molecular transitions with fluorescence resonant energy transfer. , 2007, Angewandte Chemie.
[39] M. Fisher,et al. Molecular motors: a theorist's perspective. , 2007, Annual review of physical chemistry.
[40] A. Mehta,et al. Biomechanics, One Molecule at a Time* , 1999, The Journal of Biological Chemistry.
[41] C. Jarzynski,et al. Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies , 2005, Nature.
[42] W. Greenleaf,et al. High-resolution, single-molecule measurements of biomolecular motion. , 2007, Annual review of biophysics and biomolecular structure.
[43] M E Friese,et al. Optical torque controlled by elliptical polarization. , 1998, Optics letters.
[44] Francesco S. Pavone,et al. Calibration of optical tweezers with positional detection in the back focal plane , 2006, physics/0603037.
[45] J. Berger,et al. Structure, molecular mechanisms, and evolutionary relationships in DNA topoisomerases. , 2004, Annual review of biophysics and biomolecular structure.
[46] C. F. Schmidt,et al. Thermal noise limitations on micromechanical experiments , 1998, European Biophysics Journal.
[47] S. Chu,et al. Observation of a single-beam gradient force optical trap for dielectric particles. , 1986, Optics letters.
[48] Nancy R Forde,et al. Mechanical processes in biochemistry. , 2004, Annual review of biochemistry.
[49] Carlos Bustamante,et al. Unfolding single RNA molecules: bridging the gap between equilibrium and non-equilibrium statistical thermodynamics , 2005, Quarterly Reviews of Biophysics.
[50] Miriam W. Allersma,et al. Two-dimensional tracking of ncd motility by back focal plane interferometry. , 1998, Biophysical journal.
[51] C. Schmidt,et al. Interference model for back-focal-plane displacement detection in optical tweezers. , 1998, Optics letters.
[52] Christoph F Schmidt,et al. Combining optical trapping and single-molecule fluorescence spectroscopy: enhanced photobleaching of fluorophores. , 2004, The journal of physical chemistry. B.
[53] Rod Balhorn,et al. Processive translocation and DNA unwinding by individual RecBCD enzyme molecules , 2001, Nature.
[54] H. Flyvbjerg,et al. Power spectrum analysis for optical tweezers , 2004 .
[55] M. Schnitzer,et al. Statistical kinetics of processive enzymes. , 1995, Cold Spring Harbor symposia on quantitative biology.
[56] D E Smith,et al. Direct observation of tube-like motion of a single polymer chain. , 1994, Science.
[57] G. Charvin,et al. Tracking topoisomerase activity at the single-molecule level. , 2005, Annual review of biophysics and biomolecular structure.
[58] Scott Forth,et al. Nanofabricated quartz cylinders for angular trapping: DNA supercoiling torque detection , 2007, Nature Methods.
[59] F S Pavone,et al. Three-dimensional magneto-optic trap for micro-object manipulation. , 2001, Optics letters.
[60] Stephen R. Quake,et al. Direct Measurement of Hydrodynamic Cross Correlations between Two Particles in an External Potential , 1999 .
[61] F. Ritort,et al. Methods and Applications , 2006 .
[62] A. Ashkin. Acceleration and trapping of particles by radiation pressure , 1970 .
[63] Yael Roichman,et al. Manipulation and assembly of nanowires with holographic optical traps. , 2005, Optics express.
[64] Jeff Gore,et al. Sequence-Directed DNA Translocation by Purified FtsK , 2005, Science.
[65] Chris H Wiggins,et al. Fast dynamics of supercoiled DNA revealed by single-molecule experiments , 2007, Proceedings of the National Academy of Sciences.
[66] R. Lill,et al. Maturation of iron-sulfur proteins in eukaryotes: mechanisms, connected processes, and diseases. , 2008, Annual review of biochemistry.
[67] Polly M Fordyce,et al. Simultaneous, coincident optical trapping and single-molecule fluorescence , 2004, Nature Methods.
[68] Yael Roichman,et al. Holographic optical trapping. , 2006, Applied optics.
[69] Cees Dekker,et al. Optical tweezers for force measurements on DNA in nanopores , 2006 .
[70] R. Lavery,et al. Wringing out DNA. , 2006, Physical review letters.
[71] Carlos Bustamante,et al. Differential detection of dual traps improves the spatial resolution of optical tweezers. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[72] Paul Bartlett,et al. Propagation of hydrodynamic interactions in colloidal suspensions. , 2002, Physical review letters.
[73] K. Svoboda,et al. Biological applications of optical forces. , 1994, Annual review of biophysics and biomolecular structure.
[74] Joshua W Shaevitz,et al. Statistical kinetics of macromolecular dynamics. , 2005, Biophysical journal.
[75] Jens Michaelis,et al. Mechanism of Force Generation of a Viral DNA Packaging Motor , 2005, Cell.
[76] C. Bustamante,et al. Ten years of tension: single-molecule DNA mechanics , 2003, Nature.
[77] Frederick Sachs,et al. Extracting dwell time sequences from processive molecular motor data. , 2006, Biophysical journal.
[78] Matthew J Lang,et al. Interlaced optical force-fluorescence measurements for single molecule biophysics. , 2006, Biophysical journal.
[79] Polly M Fordyce,et al. Combined optical trapping and single-molecule fluorescence , 2003, Journal of biology.
[80] Carlos Bustamante,et al. Optical-trap force transducer that operates by direct measurement of light momentum. , 2003, Methods in enzymology.
[81] Ashley R. Carter,et al. Stabilization of an Optical Microscope to 0.1 Nm in Three Dimensions , 2022 .
[82] Debra J Searles,et al. Experimental demonstration of violations of the second law of thermodynamics for small systems and short time scales. , 2002, Physical review letters.
[83] K. Dholakia,et al. Microfluidic sorting in an optical lattice , 2003, Nature.
[84] Pál Ormos,et al. Complex micromachines produced and driven by light , 2001, CLEO 2002.
[85] J. Spudich,et al. Single myosin molecule mechanics: piconewton forces and nanometre steps , 1994, Nature.
[86] Paul R. Selvin,et al. Single-molecule techniques : a laboratory manual , 2008 .
[87] Carlos Bustamante,et al. Direct Observation of the Three-State Folding of a Single Protein Molecule , 2005, Science.
[88] Piero R Bianco,et al. Direct visualization of RecBCD movement reveals cotranslocation of the RecD motor after chi recognition. , 2005, Molecular cell.
[89] Michael Vershinin,et al. A comparison of step-detection methods: how well can you do? , 2008, Biophysical journal.
[90] S. Smith,et al. Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads. , 1992, Science.
[91] S. Block,et al. Versatile optical traps with feedback control. , 1998, Methods in enzymology.
[92] R. Nakamoto,et al. Rotational coupling in the F0F1 ATP synthase. , 1999, Annual review of biophysics and biomolecular structure.
[93] F. Ritort,et al. The nonequilibrium thermodynamics of small systems , 2005 .
[94] Paul R. Selvin,et al. Single-molecule techniques , 2008 .
[95] Vinod Subramaniam,et al. Combining optical tweezers and scanning probe microscopy to study DNA–protein interactions , 2007, Microscopy research and technique.
[96] Keir C. Neuman,et al. Single-Molecule Micromanipulation Techniques , 2007 .
[97] Roee Amit,et al. Increased bending rigidity of single DNA molecules by H-NS, a temperature and osmolarity sensor. , 2003, Biophysical journal.
[98] Christoph F. Schmidt,et al. Power spectrum analysis for optical tweezers. II: Laser wavelength dependence of parasitic filtering, and how to achieve high bandwidth , 2006 .
[99] E. Peterman,et al. Dissecting elastic heterogeneity along DNA molecules coated partly with Rad51 using concurrent fluorescence microscopy and optical tweezers. , 2006, Biophysical journal.
[100] E. Stelzer,et al. Three‐dimensional high‐resolution particle tracking for optical tweezers by forward scattered light , 1999, Microscopy research and technique.
[101] N. Cozzarelli,et al. DNA overwinds when stretched , 2006, Nature.
[102] Michael D. Stone,et al. Structural transitions and elasticity from torque measurements on DNA , 2003, Nature.
[103] T. Perkins,et al. Measuring 0.1-nm motion in 1 ms in an optical microscope with differential back-focal-plane detection. , 2004, Optics letters.
[104] J. Molloy,et al. Optical chopsticks: digital synthesis of multiple optical traps. , 1998, Methods in cell biology.
[105] E. Isacoff,et al. Allosteric control of an ionotropic glutamate receptor with an optical switch , 2006, Nature chemical biology.
[106] M. Wallace,et al. Combined single-molecule force and fluorescence measurements for biology , 2003, Journal of biology.
[107] R. Rosenfeld. Nature , 2009, Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery.
[108] Michelle D. Wang,et al. Optical torque wrench: angular trapping, rotation, and torque detection of quartz microparticles. , 2004, Physical review letters.
[109] R. T. Dame,et al. The role of nucleoid‐associated proteins in the organization and compaction of bacterial chromatin , 2005, Molecular microbiology.
[110] Joshua W. Shaevitz,et al. Backtracking by single RNA polymerase molecules observed at near-base-pair resolution , 2003, Nature.
[111] X. Zhuang. Single-molecule RNA science. , 2005, Annual review of biophysics and biomolecular structure.
[112] Peter J. Pauzauskie,et al. Optical trapping and integration of semiconductor nanowire assemblies in water , 2006, Nature materials.
[113] He,et al. Direct observation of transfer of angular momentum to absorptive particles from a laser beam with a phase singularity. , 1995, Physical review letters.
[114] J. Liphardt,et al. Reversible Unfolding of Single RNA Molecules by Mechanical Force , 2001, Science.
[115] H. Berg. The rotary motor of bacterial flagella. , 2003, Annual review of biochemistry.
[116] B. Cravatt,et al. Activity-based protein profiling: from enzyme chemistry to proteomic chemistry. , 2008, Annual review of biochemistry.
[117] C Jarzynski,et al. Experimental test of Hatano and Sasa's nonequilibrium steady-state equality. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[118] Fan Bai,et al. A programmable optical angle clamp for rotary molecular motors. , 2007, Biophysical journal.
[119] Steven M. Block,et al. Kinesin Moves by an Asymmetric Hand-OverHand Mechanism , 2003 .
[120] Ignacio Tinoco,et al. Determination of thermodynamics and kinetics of RNA reactions by force , 2006, Quarterly Reviews of Biophysics.
[121] Marileen Dogterom,et al. Optical trap setup for measuring microtubule pushing forces , 2003 .
[122] S. Chu,et al. Laser Manipulation of Atoms and Particles , 1991, Science.
[123] G. Wuite,et al. On the role of H-NS in the organization of bacterial chromatin: from bulk to single molecules and back. , 2003, Biophysical journal.
[124] Francesco S. Pavone,et al. Force and torque measurements using magnetic micro beads for single molecule biophysics , 2003 .
[125] Halina Rubinsztein-Dunlop,et al. Orientation of optically trapped nonspherical birefringent particles. , 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.
[126] Arivalagan Gajraj,et al. All-optical constant-force laser tweezers. , 2004, Biophysical journal.
[127] Johannes Courtial,et al. Optically controlled three-dimensional rotation of microscopic objects , 2003 .
[128] H. Rubinsztein-Dunlop,et al. Optical alignment and spinning of laser-trapped microscopic particles , 1998, Nature.
[129] G. Oster,et al. The physics of molecular motors. , 2001, Accounts of chemical research.
[130] Gijs J. L. Wuite,et al. Bacterial chromatin organization by H-NS protein unravelled using dual DNA manipulation , 2006, Nature.
[131] A. Mehta,et al. Single-molecule biomechanics with optical methods. , 1999, Science.
[132] W. Greenleaf,et al. Direct observation of base-pair stepping by RNA polymerase , 2005, Nature.
[133] S. Quake,et al. Relaxation of a single DNA molecule observed by optical microscopy. , 1994, Science.
[134] Hiroto Tanaka,et al. Simultaneous Observation of Individual ATPase and Mechanical Events by a Single Myosin Molecule during Interaction with Actin , 1998, Cell.