Enrichment of marine anammox bacteria in Hiroshima Bay sediments.

Anaerobic ammonium oxidation (anammox) involves the microbiological oxidation of ammonium with nitrite as the electron acceptor and dinitrogen gas as the main product. The Scalindua species, an anammox genus that dominates natural habitats, plays an important role in catalysing the loss of nitrogen from marine environments. Until now, a few Scalindua species have been reported to be enriched from sea sediments. The objective of this study is to enrich marine anammox bacteria with coastal sediments in Hiroshima Bay as the inocula. The enrichment was achieved using a continuous upflow column reactor with synthetic sea water containing ammonium and nitrite. After 48 days of incubation, a simultaneous decrease in ammonium and nitrite was observed. A total nitrogen removal rate of 1.16 kg-N m(-3) day(-1) was attained after 306 days of incubation when the nitrogen loading rate was 1.32 kg-N m(-3) day(-1). Phylogenetic analysis revealed that the sequence similarity between the marine anammox-like bacteria in this reactor and the unidentified Candidatus Scalindua sp. was 96-98%. We successfully enriched marine anammox bacteria in the sediments of Hiroshima Bay by using synthetic sea water. Further studies are needed to investigate the characteristics of marine anammox bacteria, including optimal pH, temperature, and nitrogen loading rate.

[1]  B. Ward,et al.  Denitrification as the dominant nitrogen loss process in the Arabian Sea , 2009, Nature.

[2]  E. V. van Donselaar,et al.  Enrichment and characterization of marine anammox bacteria associated with global nitrogen gas production. , 2008, Environmental microbiology.

[3]  R. Amann,et al.  A microdiversity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones. , 2008, Environmental microbiology.

[4]  J. G. Kuenen,et al.  Anammox bacteria: from discovery to application , 2008, Nature Reviews Microbiology.

[5]  K. Sakka,et al.  Enrichment of anammox bacteria from marine environment for the construction of a bioremediation reactor , 2008, Applied Microbiology and Biotechnology.

[6]  A. Obuchi,et al.  Detection of Anammox Activity and Diversity of Anammox Bacteria-Related 16S rRNA Genes in Coastal Marine Sediment in Japan , 2007 .

[7]  N. Ward Faculty Opinions recommendation of Candidatus "Scalindua brodae", sp. nov., Candidatus "Scalindua wagneri", sp. nov., two new species of anaerobic ammonium oxidizing bacteria. , 2004 .

[8]  A. Devol Nitrogen cycle: Solution to a marine mystery , 2003, Nature.

[9]  J. G. Kuenen,et al.  Anaerobic ammonium oxidation by anammox bacteria in the Black Sea , 2003, Nature.

[10]  K. Schleifer,et al.  The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set. , 1999, Systematic and applied microbiology.

[11]  J. G. Kuenen,et al.  Missing lithotroph identified as new planctomycete , 1999, Nature.

[12]  S. Okabe,et al.  In Situ Analysis of Nitrifying Biofilms as Determined by In Situ Hybridization and the Use of Microelectrodes , 1999, Applied and Environmental Microbiology.

[13]  R Amann,et al.  Monitoring a widespread bacterial group: in situ detection of planctomycetes with 16S rRNA-targeted probes. , 1998, Microbiology.

[14]  J. J. Heijnen,et al.  The sequencing batch reactor as a powerful tool for the study of slowly growing anaerobic ammonium-oxidizing microorganisms , 1998, Applied Microbiology and Biotechnology.

[15]  D. Stahl,et al.  Characterization of universal small-subunit rRNA hybridization probes for quantitative molecular microbial ecology studies , 1996, Applied and environmental microbiology.

[16]  Lesley A. Robertson,et al.  Autotrophic growth of anaerobic ammonium-oxidizing micro-organisms in a fluidized bed reactor , 1996 .

[17]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.

[18]  R. Amann,et al.  Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations , 1990, Applied and environmental microbiology.

[19]  H. Kawashima,et al.  Enrichment culture of marine anaerobic ammonium oxidation (anammox) bacteria from sediment of sea-based waste disposal site. , 2009, Journal of bioscience and bioengineering.

[20]  M. Strous,et al.  Candidatus "Scalindua brodae", sp. nov., Candidatus "Scalindua wagneri", sp. nov., two new species of anaerobic ammonium oxidizing bacteria. , 2003, Systematic and applied microbiology.

[21]  B L Maidak,et al.  The RDP-II (Ribosomal Database Project) , 2001, Nucleic Acids Res..

[22]  Ross A. Overbeek,et al.  The RDP (Ribosomal Database Project) , 1997, Nucleic Acids Res..