Positive Feedback Between PU.1 and the Cell Cycle Controls Myeloid Differentiation

A Different Cycle for Differentiation The regulated expression of transcription factors determines cell fate decisions during cell differentiation. The transcription factor PU.1 is an important determinant in the differentiation of hematopoietic progenitors to lymphocytes or myeloid cells, where high expression induces macrophage differentiation, whereas low expression leads to the development of B lymphocytes. How PU.1 expression levels are regulated during this cell fate choice, however, is not well understood. Kueh et al. (p. 670, published online 18 July) found that in mice, reduced transcription of PU.1 led to its reduced expression in developing B lymphocytes, whereas in macrophages, PU.1 was able to accumulate stably because of a lengthening of the cell cycle. Exogenous expression of PU.1 in progenitors supported cell cycle lengthening and macrophage differentiation, and mathematical modeling suggested that such a feedback loop could maintain a slow-dividing macrophage developmental state. Regulation of cell cycle length is a feedback mechanism that controls cell fate decisions in developing macrophages. Regulatory gene circuits with positive-feedback loops control stem cell differentiation, but several mechanisms can contribute to positive feedback. Here, we dissect feedback mechanisms through which the transcription factor PU.1 controls lymphoid and myeloid differentiation. Quantitative live-cell imaging revealed that developing B cells decrease PU.1 levels by reducing PU.1 transcription, whereas developing macrophages increase PU.1 levels by lengthening their cell cycles, which causes stable PU.1 accumulation. Exogenous PU.1 expression in progenitors increases endogenous PU.1 levels by inducing cell cycle lengthening, implying positive feedback between a regulatory factor and the cell cycle. Mathematical modeling showed that this cell cycle–coupled feedback architecture effectively stabilizes a slow-dividing differentiated state. These results show that cell cycle duration functions as an integral part of a positive autoregulatory circuit to control cell fate.

[1]  K. Jaqaman,et al.  Robust single particle tracking in live cell time-lapse sequences , 2008, Nature Methods.

[2]  Tilman Schneider-Poetsch,et al.  Inhibition of Eukaryotic Translation Elongation by Cycloheximide and Lactimidomycin , 2010, Nature chemical biology.

[3]  B. Williams,et al.  Dynamic Transformations of Genome-wide Epigenetic Marking and Transcriptional Control Establish T Cell Identity , 2012, Cell.

[4]  Richard Dahl,et al.  Regulation of macrophage and neutrophil cell fates by the PU.1:C/EBPα ratio and granulocyte colony-stimulating factor , 2003, Nature Immunology.

[5]  Federico Calegari,et al.  Cell cycle control of mammalian neural stem cells: putting a speed limit on G1. , 2010, Trends in cell biology.

[6]  E. Rothenberg,et al.  Architecture of a lymphomyeloid developmental switch controlled by PU.1, Notch and Gata3 , 2013, Development.

[7]  E. Pujadas,et al.  A recurrent network involving the transcription factors PU.1 and Gfi1 orchestrates innate and adaptive immune cell fates. , 2009, Immunity.

[8]  Felicia S. L. Ng,et al.  Sustained PU.1 levels balance cell-cycle regulators to prevent exhaustion of adult hematopoietic stem cells. , 2013, Molecular cell.

[9]  A. Jegga,et al.  Dose-dependent repression of T-cell and natural killer cell genes by PU.1 enforces myeloid and B-cell identity , 2008, Leukemia.

[10]  R. Rosenfeld Nature , 2009, Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery.

[11]  Pu Zhang,et al.  Potential Autoregulation of Transcription Factor PU.1 by an Upstream Regulatory Element , 2005, Molecular and Cellular Biology.

[12]  Aleksandar Dakic,et al.  The transcription factor PU.1 controls dendritic cell development and Flt3 cytokine receptor expression in a dose-dependent manner. , 2010, Immunity.

[13]  J. Chen,et al.  Cell-Type-Specific Activation and Repression of PU.1 by a Complex of Discrete, Functionally Specialized cis-Regulatory Elements , 2010, Molecular and Cellular Biology.

[14]  P. Sperryn,et al.  Blood. , 1989, British journal of sports medicine.

[15]  Savageau Ma,et al.  A theory of alternative designs for biochemical control systems. , 1985 .

[16]  H. Singh,et al.  PU.1, a shared transcriptional regulator of lymphoid and myeloid cell fates. , 1999, Cold Spring Harbor symposia on quantitative biology.

[17]  B. Edgar,et al.  Mechanisms controlling cell cycle exit upon terminal differentiation. , 2007, Current opinion in cell biology.

[18]  S. Targ,et al.  T Follicular Helper Cell Dynamics in Germinal Centers , 2013, Science.

[19]  J. Paulsson Summing up the noise in gene networks , 2004, Nature.

[20]  M A Savageau,et al.  A theory of alternative designs for biochemical control systems. , 1985, Biomedica biochimica acta.

[21]  E. Rothenberg,et al.  Delayed, asynchronous, and reversible T-lineage specification induced by Notch/Delta signaling. , 2005, Genes & development.

[22]  Salam A. Assi,et al.  Two distinct auto-regulatory loops operate at the PU.1 locus in B cells and myeloid cells. , 2011, Blood.

[23]  R. Wilson,et al.  Reduced PU.1 expression causes myeloid progenitor expansion and increased leukemia penetrance in mice expressing PML-RARalpha. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[24]  S. Nutt,et al.  Oncogenes and Tumor Suppressors (795 articles) Plenary Papers (356 articles) , 2004 .

[25]  J. Paulsson,et al.  Effects of Molecular Memory and Bursting on Fluctuations in Gene Expression , 2008, Science.

[26]  L. You,et al.  Emergent bistability by a growth-modulating positive feedback circuit. , 2009, Nature chemical biology.

[27]  S. Orkin,et al.  Transcriptional regulation of erythropoiesis: an affair involving multiple partners , 2002, Oncogene.

[28]  H. Singh,et al.  Regulation of B lymphocyte and macrophage development by graded expression of PU.1. , 2000, Science.

[29]  Rochelle A. Diamond,et al.  Notch/Delta signaling constrains reengineering of pro-T cells by PU.1 , 2006, Proceedings of the National Academy of Sciences.

[30]  B. Calabretta,et al.  Granulocytic differentiation of normal hematopoietic precursor cells induced by transcription factor PU.1 correlates with negative regulation of the c-myb promoter. , 1997, Blood.

[31]  J. Walsh,et al.  PU.1 regulates both cytokine‐dependent proliferation and differentiation of granulocyte/macrophage progenitors , 1998, The EMBO journal.

[32]  J. Kutok,et al.  Acute myeloid leukemia induced by graded reduction of a lineage-specific transcription factor, PU.1 , 2004, Nature Genetics.

[33]  K. Choe,et al.  PU.1 Directly Regulates cdk6 Gene Expression, Linking the Cell Proliferation and Differentiation Programs in Erythroid Cells* , 2009, The Journal of Biological Chemistry.

[34]  Uri Alon,et al.  Proteome Half-Life Dynamics in Living Human Cells , 2011, Science.

[35]  Li Wu,et al.  Inactivation of PU.1 in adult mice leads to the development of myeloid leukemia , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[36]  宁北芳,et al.  疟原虫var基因转换速率变化导致抗原变异[英]/Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A , 2005 .

[37]  Donald Metcalf,et al.  Dynamic regulation of PU.1 expression in multipotent hematopoietic progenitors , 2005, The Journal of experimental medicine.

[38]  P. Kastner,et al.  Visualizing PU.1 activity during hematopoiesis. , 2005, Experimental hematology.

[39]  Leonard I Zon,et al.  Cell stem cell. , 2007, Cell stem cell.

[40]  Jacques Rougemont,et al.  GETPrime: a gene- or transcript-specific primer database for quantitative real-time PCR , 2011, Database J. Biol. Databases Curation.

[41]  D. W. Fry,et al.  Discovery of a potent and selective inhibitor of cyclin-dependent kinase 4/6. , 2005, Journal of medicinal chemistry.

[42]  R. Steinman Cell cycle regulators and hematopoiesis , 2002, Oncogene.

[43]  Ellen V Rothenberg,et al.  Constitutive expression of PU.1 in fetal hematopoietic progenitors blocks T cell development at the pro-T cell stage. , 2002, Immunity.

[44]  N. Kondoh,et al.  Down‐regulation of c‐ myc and bcl‐2 gene expression in PU.1‐induced apoptosis in murine erythroleukemia cells , 1998, International journal of cancer.

[45]  M. Selbach,et al.  Global quantification of mammalian gene expression control , 2011, Nature.

[46]  D. Gillespie Exact Stochastic Simulation of Coupled Chemical Reactions , 1977 .

[47]  K. Akashi,et al.  Reciprocal activation of GATA-1 and PU.1 marks initial specification of hematopoietic stem cells into myeloerythroid and myelolymphoid lineages. , 2007, Cell stem cell.

[48]  Daniel G. Tenen,et al.  Transcription factors in myeloid development: balancing differentiation with transformation , 2007, Nature Reviews Immunology.

[49]  Cor J. Veenman,et al.  Resolving Motion Correspondence for Densely Moving Points , 2001, IEEE Trans. Pattern Anal. Mach. Intell..

[50]  L. Wilkinson Immunity , 1891, The Lancet.

[51]  Rafael C. González,et al.  Digital image processing, 3rd Edition , 2008 .

[52]  F. Moreau-Gachelin,et al.  Spi-1/PU.1 proto-oncogene induces opposite effects on monocytic and erythroid differentiation of K562 cells. , 1998, Biochemical and biophysical research communications.

[53]  G. Behre,et al.  Proteomic identification of C/EBP-DBD multiprotein complex: JNK1 activates stem cell regulator C/EBPα by inhibiting its ubiquitination , 2007, Oncogene.