RNALogo: a new approach to display structural RNA alignment
暂无分享,去创建一个
Jorng-Tzong Horng | Hsien-Da Huang | Tzu-Hao Chang | Hsien-Da Huang | Jorng-Tzong Horng | Tzu-Hao Chang
[1] Walter Fontana,et al. Fast folding and comparison of RNA secondary structures , 1994 .
[2] Thomas M. Cover,et al. Elements of Information Theory , 2005 .
[3] T. D. Schneider,et al. Sequence logos: a new way to display consensus sequences. , 1990, Nucleic acids research.
[4] G. Stormo,et al. Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods. , 1992, Nucleic acids research.
[5] R. Batey,et al. Thermodynamic and kinetic characterization of ligand binding to the purine riboswitch aptamer domain. , 2006, Journal of molecular biology.
[6] R. Plasterk,et al. The diverse functions of microRNAs in animal development and disease. , 2006, Developmental cell.
[7] E. Groisman,et al. The intricate world of riboswitches. , 2007, Current opinion in microbiology.
[8] J. Thompson,et al. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.
[9] R D Klausner,et al. The interaction between the iron-responsive element binding protein and its cognate RNA is highly dependent upon both RNA sequence and structure. , 1993, Nucleic acids research.
[10] Gary D. Stormo,et al. Displaying the information contents of structural RNA alignments: the structure logos , 1997, Comput. Appl. Biosci..
[11] Gary D. Stormo,et al. enoLOGOS: a versatile web tool for energy normalized sequence logos , 2005, Nucleic Acids Res..
[12] Sean R. Eddy,et al. Rfam: annotating non-coding RNAs in complete genomes , 2004, Nucleic Acids Res..
[13] H. Munro,et al. Mutagenesis of the iron-regulatory element further defines a role for RNA secondary structure in the regulation of ferritin and transferrin receptor expression. , 1992, The Journal of biological chemistry.
[14] Eckart Bindewald,et al. CorreLogo: an online server for 3D sequence logos of RNA and DNA alignments , 2006, Nucleic Acids Res..
[15] R. Batey,et al. Mutational analysis of the purine riboswitch aptamer domain. , 2007, Biochemistry.
[16] Sam Griffiths-Jones,et al. miRBase: the microRNA sequence database. , 2006, Methods in molecular biology.
[17] G. Crooks,et al. WebLogo: a sequence logo generator. , 2004, Genome research.