Metrics for the Human Proteome Project 2016: Progress on Identifying and Characterizing the Human Proteome, Including Post-Translational Modifications.
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Lydie Lane | Eric W Deutsch | Gilbert S Omenn | Ronald C Beavis | Christopher M Overall | G. Omenn | E. Deutsch | E. Lundberg | R. Beavis | C. Overall | Lydie Lane | Emma K Lundberg
[1] David D. Shteynberg,et al. State of the Human Proteome in 2014/2015 As Viewed through PeptideAtlas: Enhancing Accuracy and Coverage through the AtlasProphet. , 2015, Journal of proteome research.
[2] Yang Zhang,et al. Functional implications of structural predictions for alternative splice proteins expressed in Her2/neu-induced breast cancers. , 2011, Journal of proteome research.
[3] Andrew I Su,et al. Data-Driven Approach To Determine Popular Proteins for Targeted Proteomics Translation of Six Organ Systems. , 2016, Journal of proteome research.
[4] C. Pineau,et al. Human Spermatozoa as a Model for Detecting Missing Proteins in the Context of the Chromosome-Centric Human Proteome Project. , 2015, Journal of proteome research.
[5] Andrew R. Jones,et al. ProteomeXchange provides globally co-ordinated proteomics data submission and dissemination , 2014, Nature Biotechnology.
[6] Henk W. P. van den Toorn,et al. An Augmented Multiple-Protease-Based Human Phosphopeptide Atlas. , 2015, Cell reports.
[7] U. Eckhard,et al. The Human Dental Pulp Proteome and N-Terminome: Levering the Unexplored Potential of Semitryptic Peptides Enriched by TAILS to Identify Missing Proteins in the Human Proteome Project in Underexplored Tissues. , 2015, Journal of proteome research.
[8] G. Omenn,et al. A first step toward completion of a genome-wide characterization of the human proteome. , 2013, Journal of proteome research.
[9] F. He,et al. Deep Coverage Proteomics Identifies More Low-Abundance Missing Proteins in Human Testis Tissue with Q-Exactive HF Mass Spectrometer. , 2016, Journal of proteome research.
[10] Lennart Martens,et al. Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1. , 2016, Journal of proteome research.
[11] Yang Zhang,et al. Functional Networks of Highest-Connected Splice Isoforms: From The Chromosome 17 Human Proteome Project. , 2015, Journal of proteome research.
[12] Yonghao Yu,et al. Site-specific characterization of the Asp- and Glu-ADP-ribosylated proteome , 2013, Nature Methods.
[13] Theodoros Goulas,et al. LysargiNase mirrors trypsin for protein C-terminal and methylation-site identification , 2014, Nature Methods.
[14] Quanhui Wang,et al. Chromosome-8-coded proteome of Chinese Chromosome Proteome Data set (CCPD) 2.0 with partial immunohistochemical verifications. , 2014, Journal of proteome research.
[15] A. Nesvizhskii,et al. Metrics for the Human Proteome Project 2015: Progress on the Human Proteome and Guidelines for High-Confidence Protein Identification. , 2015, Journal of proteome research.
[16] Tao Zhou,et al. Insights into the lysine acetylproteome of human sperm. , 2014, Journal of proteomics.
[17] Thibault Robin,et al. Looking for Missing Proteins in the Proteome of Human Spermatozoa: An Update. , 2016, Journal of proteome research.
[18] Cheng Chang,et al. Omics evidence: single nucleotide variants transmissions on chromosome 20 in liver cancer cell lines. , 2014, Journal of proteome research.
[19] Sergio Contrino,et al. ArrayExpress—a public repository for microarray gene expression data at the EBI , 2004, Nucleic Acids Res..
[20] Assessing Transcription Regulatory Elements To Evaluate the Expression Status of Missing Protein Genes on Chromosomes 11 and 19. , 2015, Journal of proteome research.
[21] Cathy H. Wu,et al. The Human Proteome Project: Current State and Future Direction , 2011, Molecular & Cellular Proteomics.
[22] U. Eckhard,et al. Protein Termini and Their Modifications Revealed by Positional Proteomics. , 2015, ACS chemical biology.
[23] G. von Heijne,et al. Tissue-based map of the human proteome , 2015, Science.
[24] Luis Mendoza,et al. Trans‐Proteomic Pipeline, a standardized data processing pipeline for large‐scale reproducible proteomics informatics , 2015, Proteomics. Clinical applications.
[25] Eric W. Deutsch,et al. PASSEL: The PeptideAtlas SRMexperiment library , 2012, Proteomics.
[26] Anushya Muruganujan,et al. PANTHER version 10: expanded protein families and functions, and analysis tools , 2015, Nucleic Acids Res..
[27] Amos Bairoch,et al. Metrics for the Human Proteome Project 2013-2014 and strategies for finding missing proteins. , 2014, Journal of proteome research.
[28] Chris Sander,et al. Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome , 2016, Cell.
[29] David Fenyö,et al. g2pDB: A Database Mapping Protein Post-Translational Modifications to Genomic Coordinates. , 2016, Journal of proteome research.
[30] Philipp Bucher,et al. CleanEx: a database of heterogeneous gene expression data based on a consistent gene nomenclature , 2004, Nucleic Acids Res..
[31] Eric W Deutsch,et al. State of the human proteome in 2013 as viewed through PeptideAtlas: comparing the kidney, urine, and plasma proteomes for the biology- and disease-driven Human Proteome Project. , 2014, Journal of proteome research.
[32] Jens Nielsen,et al. Transcriptomics resources of human tissues and organs , 2016, Molecular systems biology.
[33] F. Corrales,et al. Prediction of a missing protein expression map in the context of the human proteome project. , 2015, Journal of proteome research.
[34] M. Mann,et al. Ultradeep human phosphoproteome reveals a distinct regulatory nature of Tyr and Ser/Thr-based signaling. , 2014, Cell reports.
[35] H. Zou,et al. An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome. , 2014, Journal of proteomics.
[36] Qiaojun He,et al. The HER2 inhibitor TAK165 Sensitizes Human Acute Myeloid Leukemia Cells to Retinoic Acid-Induced Myeloid Differentiation by activating MEK/ERK mediated RARα/STAT1 axis , 2016, Scientific Reports.
[37] Miguel Pignatelli,et al. Database: The Journal of Biological Databases and Curation , 2016 .
[38] Alan Bridge,et al. The UniProtKB guide to the human proteome , 2016, Database J. Biol. Databases Curation.
[39] Tao Zhang,et al. Tissue-Based Proteogenomics Reveals that Human Testis Endows Plentiful Missing Proteins. , 2015, Journal of proteome research.
[40] José A. Dianes,et al. 2016 update of the PRIDE database and its related tools , 2016, Nucleic Acids Res..
[41] R. Aebersold,et al. A uniform proteomics MS/MS analysis platform utilizing open XML file formats , 2005, Molecular systems biology.
[42] Luis Mendoza,et al. PASSEL: The PeptideAtlas SRMexperiment library , 2012, Proteomics.
[43] C. Lindskog,et al. The human testis-specific proteome defined by transcriptomics and antibody-based profiling. , 2014, Molecular human reproduction.
[44] Sean J Humphrey,et al. High-throughput phosphoproteomics reveals in vivo insulin signaling dynamics , 2015, Nature Biotechnology.
[45] C. Overall,et al. TopFIND, a knowledgebase linking protein termini with function , 2011, Nature Methods.
[46] A. Bairoch,et al. Missing Protein Landscape of Human Chromosomes 2 and 14: Progress and Current Status. , 2016, Journal of proteome research.
[47] Yuanfang Guan,et al. Genome-Wide Functional Annotation of Human Protein-Coding Splice Variants Using Multiple Instance Learning. , 2016, Journal of proteome research.
[48] G. Omenn. Plasma proteomics, the Human Proteome Project, and cancer-associated alternative splice variant proteins. , 2014, Biochimica et biophysica acta.