The complement of protein kinases of the microsporidium Encephalitozoon cuniculi in relation to those of Saccharomyces cerevisiae and Schizosaccharomyces pombe

[1]  G. Barton,et al.  Classification and functional annotation of eukaryotic protein kinases , 2007, Proteins.

[2]  L. Meijer,et al.  Antimalarial drug discovery: targeting protein kinases , 2007, Expert opinion on therapeutic targets.

[3]  J. Ward,et al.  Heterozygous deletion of mitotic arrest-deficient protein 1 (MAD1) increases the incidence of tumors in mice. , 2007, Cancer research.

[4]  Y. Kassir,et al.  The Saccharomyces cerevisiae GSK-3β Homologs , 2006 .

[5]  G. Scapin Protein kinase inhibition: different approaches to selective inhibitor design. , 2006, Current drug targets.

[6]  K. Nasmyth,et al.  Monopolar Attachment of Sister Kinetochores at Meiosis I Requires Casein Kinase 1 , 2006, Cell.

[7]  G. Barton,et al.  Emerging roles of pseudokinases. , 2006, Trends in cell biology.

[8]  K. Hofmann,et al.  Yeast homolog of a cancer‐testis antigen defines a new transcription complex , 2006, The EMBO journal.

[9]  Karen Schindler,et al.  Phosphorylation of Ime2 Regulates Meiotic Progression in Saccharomyces cerevisiae* , 2006, Journal of Biological Chemistry.

[10]  David Lydall,et al.  A Genome-Wide Screen Identifies the Evolutionarily Conserved KEOPS Complex as a Telomere Regulator , 2006, Cell.

[11]  M. Hall,et al.  TOR Signaling in Growth and Metabolism , 2006, Cell.

[12]  Yael Mandel-Gutfreund,et al.  The Saccharomyces cerevisiae GSK-3 beta homologs. , 2006, Current drug targets.

[13]  C. Naula,et al.  Protein kinases as drug targets in trypanosomes and Leishmania. , 2005, Biochimica et biophysica acta.

[14]  Oliver Billker,et al.  Protein kinases as targets for antimalarial intervention: Kinomics, structure-based design, transmission-blockade, and targeting host cell enzymes. , 2005, Biochimica et biophysica acta.

[15]  A. Wlodawer,et al.  The RIO kinases: an atypical protein kinase family required for ribosome biogenesis and cell cycle progression. , 2005, Biochimica et biophysica acta.

[16]  M. Stark,et al.  Kinetochore capture and bi-orientation on the mitotic spindle , 2005, Nature Reviews Molecular Cell Biology.

[17]  M. Parsons,et al.  Comparative analysis of the kinomes of three pathogenic trypanosomatids: Leishmania major, Trypanosoma brucei and Trypanosoma cruzi , 2005, BMC Genomics.

[18]  T. Toda,et al.  Fission yeast MO25 protein is localized at SPB and septum and is essential for cell morphogenesis , 2005, The EMBO journal.

[19]  R. Comis,et al.  The current situation: erlotinib (Tarceva) and gefitinib (Iressa) in non-small cell lung cancer. , 2005, The oncologist.

[20]  Rolf Apweiler,et al.  InterProScan: protein domains identifier , 2005, Nucleic Acids Res..

[21]  O. Aparicio,et al.  Swe1 regulation and transcriptional control restrict the activity of mitotic cyclins toward replication proteins in Saccharomyces cerevisiae. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[22]  Andreas Gocht,et al.  The casein kinase 1 family: participation in multiple cellular processes in eukaryotes. , 2005, Cellular signalling.

[23]  S. Bandhakavi,et al.  A global view of CK2 function and regulation , 2005, Molecular and Cellular Biochemistry.

[24]  R. Krishna Murthy Karuturi,et al.  Systematic Deletion Analysis of Fission Yeast Protein Kinases , 2005, Eukaryotic Cell.

[25]  K. M. Popov,et al.  Role of protein-protein interactions in the regulation of pyruvate dehydrogenase kinase activity. , 2005, The Biochemical journal.

[26]  P. Brennwald,et al.  The yeast par-1 homologs kin1 and kin2 show genetic and physical interactions with components of the exocytic machinery. , 2004, Molecular biology of the cell.

[27]  N Srinivasan,et al.  A genomic perspective of protein kinases in Plasmodium falciparum , 2004, Proteins.

[28]  O. Aparicio,et al.  Swe 1 regulation and transcriptional control restrict the activity of mitotic cyclins toward replication proteins in Saccharomyces cerevisiae , 2005 .

[29]  E. Bapteste,et al.  The genes encoding cAMP-dependent protein kinase catalytic subunit homologues of the microsporidia Encephalitozoon intestinalis and E. cuniculi: molecular characterisation and phylogenetic analysis. , 2004, Parasitology international.

[30]  Pauline Ward,et al.  Protein kinases of the human malaria parasite Plasmodium falciparum: the kinome of a divergent eukaryote , 2004, BMC Genomics.

[31]  Viji M. Draviam,et al.  Timing and checkpoints in the regulation of mitotic progression. , 2004, Developmental cell.

[32]  L. C. Robinson,et al.  Akr1p-dependent Palmitoylation of Yck2p Yeast Casein Kinase 1 Is Necessary and Sufficient for Plasma Membrane Targeting* , 2004, Journal of Biological Chemistry.

[33]  Erich A. Nigg,et al.  Polo-like kinases and the orchestration of cell division , 2004, Nature Reviews Molecular Cell Biology.

[34]  M. Schweizer,et al.  Metabolism and Molecular Physiology of Saccharomyces Cerevisiae, 2nd Edition , 2004 .

[35]  Kendall J Blumer,et al.  The p21-activated Protein Kinase-related Kinase Cla4 Is a Coincidence Detector of Signaling by Cdc42 and Phosphatidylinositol 4-Phosphate* , 2004, Journal of Biological Chemistry.

[36]  W. Kaelin,et al.  Gleevec: Prototype or Outlier? , 2004, Science's STKE.

[37]  M. Winey,et al.  A Field Guide to the Mps1 Family of Protein Kinases , 2004, Cell cycle.

[38]  Jodie J. Yin,et al.  A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes , 2004, Genome Biology.

[39]  D. Lew,et al.  The morphogenesis checkpoint: how yeast cells watch their figures. , 2003, Current opinion in cell biology.

[40]  J. Swedlow,et al.  Mitotic mechanics: the auroras come into view. , 2003, Current opinion in cell biology.

[41]  M. Winey,et al.  Human Mps1 protein kinase is required for centrosome duplication and normal mitotic progression , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[42]  G. Drewes,et al.  The protein kinase kin1, the fission yeast orthologue of mammalian MARK/PAR‐1, localises to new cell ends after mitosis and is important for bipolar growth , 2003, FEBS letters.

[43]  V. Simanis Events at the end of mitosis in the budding and fission yeasts , 2003, Journal of Cell Science.

[44]  M. Snyder,et al.  Negative regulation of calcineurin signaling by Hrr25p, a yeast homolog of casein kinase I. , 2003, Genes & development.

[45]  D. M. Krylov,et al.  Gene loss, protein sequence divergence, gene dispensability, expression level, and interactivity are correlated in eukaryotic evolution. , 2003, Genome research.

[46]  Darren A. Natale,et al.  The COG database: an updated version includes eukaryotes , 2003, BMC Bioinformatics.

[47]  Timothy R Hughes,et al.  RAM: a conserved signaling network that regulates Ace2p transcriptional activity and polarized morphogenesis. , 2003, Molecular biology of the cell.

[48]  J. Heinisch,et al.  Evolution, biochemistry and genetics of protein kinase C in fungi , 2003, Current Genetics.

[49]  Hiroshi Nojima,et al.  The Saccharomyces cerevisiae bud-neck proteins Kcc4 and Gin4 have distinct but partially-overlapping cellular functions. , 2003, Genes & genetic systems.

[50]  I. Hagan,et al.  S. pombe Aurora Kinase/Survivin Is Required for Chromosome Condensation and the Spindle Checkpoint Attachment Response , 2003, Current Biology.

[51]  P. Gleizes,et al.  Late Cytoplasmic Maturation of the Small Ribosomal Subunit Requires RIO Proteins in Saccharomyces cerevisiae , 2003, Molecular and Cellular Biology.

[52]  Kathryn R. Ayscough,et al.  The Ark1/Prk1 family of protein kinases , 2003 .

[53]  S. Biggins,et al.  The budding yeast Ipl1/Aurora protein kinase regulates mitotic spindle disassembly , 2003, The Journal of cell biology.

[54]  D. M. Krylov,et al.  Evolution of Eukaryotic Cell Cycle Regulation Stepwise Addition of Regulatory Kinases and Late Advent of the CDKs , 2003, Current Biology.

[55]  Kara Dolinski,et al.  Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins , 2003, Nucleic Acids Res..

[56]  E. Smythe,et al.  The Ark1/Prk1 family of protein kinases. Regulators of endocytosis and the actin skeleton. , 2003, EMBO reports.

[57]  T. Hunter,et al.  The Protein Kinase Complement of the Human Genome , 2002, Science.

[58]  T. Weinert,et al.  Toward maintaining the genome: DNA damage and replication checkpoints. , 2002, Annual review of genetics.

[59]  S. McKnight,et al.  Coordinate Regulation of Sugar Flux and Translation by PAS Kinase , 2002, Cell.

[60]  Fabienne Thomarat,et al.  Functional and evolutionary analysis of a eukaryotic parasitic genome. , 2002, Current opinion in microbiology.

[61]  Dongrong Chen,et al.  The Srk1 Protein Kinase Is a Target for the Sty1 Stress-activated MAPK in Fission Yeast* , 2002, The Journal of Biological Chemistry.

[62]  Rolf Apweiler,et al.  The EBI SRS server-new features , 2002, Bioinform..

[63]  J. Heinisch,et al.  Regulation of yeast protein kinase C activity by interaction with the small GTPase Rho1p through its amino‐terminal HR1 domain , 2002, Molecular microbiology.

[64]  P. Cohen,et al.  The origins of protein phosphorylation , 2002, Nature Cell Biology.

[65]  P. Cohen Protein kinases — the major drug targets of the twenty-first century? , 2002, Nature reviews. Drug discovery.

[66]  S. Forsburg,et al.  The Schizosaccharomyces pombe aurora-related kinase Ark1 interacts with the inner centromere protein Pic1 and mediates chromosome segregation and cytokinesis. , 2002, Molecular biology of the cell.

[67]  J. Diffley,et al.  The chromosome replication cycle. , 2002, Journal of cell science.

[68]  K. Nasmyth,et al.  Evidence that the Ipl1-Sli15 (Aurora Kinase-INCENP) Complex Promotes Chromosome Bi-orientation by Altering Kinetochore-Spindle Pole Connections , 2002, Cell.

[69]  D. Hardie,et al.  AMP‐activated protein kinase: the energy charge hypothesis revisited , 2001, BioEssays : news and reviews in molecular, cellular and developmental biology.

[70]  Fabienne Thomarat,et al.  Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi , 2001, Nature.

[71]  A. Amon,et al.  MEN and SIN: what's the difference? , 2001, Nature Reviews Molecular Cell Biology.

[72]  Rolf Apweiler,et al.  InterProScan - an integration platform for the signature-recognition methods in InterPro , 2001, Bioinform..

[73]  C. Newlon,et al.  The DNA replication checkpoint response stabilizes stalled replication forks , 2001, Nature.

[74]  J. Diffley,et al.  Regulation of DNA replication fork progression through damaged DNA by the Mec1/Rad53 checkpoint , 2001, Nature.

[75]  S. Moreno,et al.  Flp1, a fission yeast orthologue of the s. cerevisiae CDC14 gene, is not required for cyclin degradation or rum1p stabilisation at the end of mitosis. , 2001, Journal of cell science.

[76]  R. Rothstein,et al.  The ribonucleotide reductase inhibitor Sml1 is a new target of the Mec1/Rad53 kinase cascade during growth and in response to DNA damage , 2001, The EMBO journal.

[77]  M. Snyder,et al.  A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. , 2001, Molecular biology of the cell.

[78]  J. Workman,et al.  Recruitment of HAT Complexes by Direct Activator Interactions with the ATM-Related Tra1 Subunit , 2001, Science.

[79]  M. Katoh,et al.  Yak1p, a DYRK family kinase, translocates to the nucleus and phosphorylates yeast Pop2p in response to a glucose signal. , 2001, Genes & development.

[80]  C. Shimoda,et al.  The cyclic AMP/PKA signal pathway is required for initiation of spore germination in Schizosaccharomyces pombe , 2001, Yeast.

[81]  C. Vivarès,et al.  The microsporidian Encephalitozoon. , 2001, BioEssays : news and reviews in molecular, cellular and developmental biology.

[82]  A. Krogh,et al.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. , 2001, Journal of molecular biology.

[83]  J. Vandenhaute,et al.  Specificity of Cdk activation in vivo by the two Caks Mcs6 and Csk1 in fission yeast , 2001, The EMBO journal.

[84]  Jianchun Dong,et al.  Distinct regulatory properties of pyruvate dehydrogenase kinase and phosphatase isoforms. , 2001, Progress in nucleic acid research and molecular biology.

[85]  S. Wijmenga,et al.  Mutational and Structural Analyses of the Ribonucleotide Reductase Inhibitor Sml1 Define Its Rnr1 Interaction Domain Whose Inactivation Allows Suppression of mec1 andrad53 Lethality , 2000, Molecular and Cellular Biology.

[86]  P. Cohen,et al.  The regulation of protein function by multisite phosphorylation--a 25 year update. , 2000, Trends in biochemical sciences.

[87]  F. Urano,et al.  IRE1 and efferent signaling from the endoplasmic reticulum. , 2000, Journal of cell science.

[88]  J. Forment,et al.  Regulation of Yeast H+-ATPase by Protein Kinases Belonging to a Family Dedicated to Activation of Plasma Membrane Transporters , 2000, Molecular and Cellular Biology.

[89]  C. S. Hoffman,et al.  Glucose monitoring in fission yeast via the Gpa2 galpha, the git5 Gbeta and the git3 putative glucose receptor. , 2000, Genetics.

[90]  N. G. Davis,et al.  Akr1p and the Type I Casein Kinases Act prior to the Ubiquitination Step of Yeast Endocytosis: Akr1p Is Required for Kinase Localization to the Plasma Membrane , 2000, Molecular and Cellular Biology.

[91]  C. Shimoda,et al.  Autoregulated expression of Schizosaccharomyces pombe meiosis-specific transcription factor Mei4 and a genome-wide search for its target genes. , 2000, Genetics.

[92]  C. S. Hoffman,et al.  Glucose Monitoring in Fission Yeast via the gpa2 Ga, the git5 Gb and the git3 Putative Glucose Receptor , 2000 .

[93]  K. Irie,et al.  PDK1 Homologs Activate the Pkc1–Mitogen-Activated Protein Kinase Pathway in Yeast , 1999, Molecular and Cellular Biology.

[94]  M. Valdivieso,et al.  Schizosaccharomyces pombe protein kinase C homologues, pck1p and pck2p, are targets of rho1p and rho2p and differentially regulate cell integrity. , 1999, Journal of cell science.

[95]  J. Heinisch,et al.  The protein kinase C‐mediated MAP kinase pathway involved in the maintenance of cellular integrity in Saccharomyces cerevisiae , 1999, Molecular microbiology.

[96]  M. Carlson,et al.  Glucose repression in yeast. , 1999, Current opinion in microbiology.

[97]  J. Thorner,et al.  Functional counterparts of mammalian protein kinases PDK1 and SGK in budding yeast , 1999, Current Biology.

[98]  B. Williams,et al.  Microsporidian Biochemistry and Physiology , 1999 .

[99]  L. Weiss,et al.  The Microsporidia and Microsporidiosis , 1999 .

[100]  M. Schweizer,et al.  The metabolism and molecular physiology of Saccharomyces cerevisiae , 1998 .

[101]  J R Yates,et al.  The ATM-related cofactor Tra1 is a component of the purified SAGA complex. , 1998, Molecular cell.

[102]  P. Russell,et al.  The protein kinase Cdr2, related to Nim1/Cdr1 mitotic inducer, regulates the onset of mitosis in fission yeast. , 1998, Molecular biology of the cell.

[103]  N. Rhind,et al.  Tyrosine Phosphorylation of Cdc2 Is Required for the Replication Checkpoint in Schizosaccharomyces pombe , 1998, Molecular and Cellular Biology.

[104]  Erik L. L. Sonnhammer,et al.  A Hidden Markov Model for Predicting Transmembrane Helices in Protein Sequences , 1998, ISMB.

[105]  M. Jones,et al.  Mph1, a member of the Mps1-like family of dual specificity protein kinases, is required for the spindle checkpoint in S. pombe. , 1998, Journal of cell science.

[106]  Peter Novick,et al.  Sec3p Is a Spatial Landmark for Polarized Secretion in Budding Yeast , 1998, Cell.

[107]  Daniel H. Huson,et al.  SplitsTree: analyzing and visualizing evolutionary data , 1998, Bioinform..

[108]  Sean R. Eddy,et al.  Profile hidden Markov models , 1998, Bioinform..

[109]  W. Bandlow,et al.  The Type of Basal Promoter Determines the Regulated or Constitutive Mode of Transcription in the Common Control Region of the Yeast Gene Pair GCY1/RIO1 * , 1997, The Journal of Biological Chemistry.

[110]  T. Hunter,et al.  The protein kinases of budding yeast: six score and more. , 1997, Trends in biochemical sciences.

[111]  G. Superti-Furga,et al.  The fission yeast pmk1+ gene encodes a novel mitogen-activated protein kinase homolog which regulates cell integrity and functions coordinately with the protein kinase C pathway , 1996, Molecular and cellular biology.

[112]  P. Kaldis,et al.  The Cdk-Activating Kinase (CAK) from Budding Yeast , 1996, Cell.

[113]  Guang-Chao Chen,et al.  Rho1p, a Yeast Protein at the Interface Between Cell Polarization and Morphogenesis , 1996, Science.

[114]  M. Hoekstra,et al.  Characterization of two protein kinases from Schizosaccharomyces pombe involved in the regulation of DNA repair. , 1994, The EMBO journal.

[115]  P. Nurse,et al.  Genetic analysis of cell morphogenesis in fission yeast‐‐a role for casein kinase II in the establishment of polarized growth. , 1994, The EMBO journal.

[116]  S. Emr,et al.  A membrane‐associated complex containing the Vps15 protein kinase and the Vps34 PI 3‐kinase is essential for protein sorting to the yeast lysosome‐like vacuole. , 1993, The EMBO journal.

[117]  L. C. Robinson,et al.  Casein kinase I-like protein kinases encoded by YCK1 and YCK2 are required for yeast morphogenesis , 1993, Molecular and cellular biology.

[118]  Brian J. Stevenson,et al.  Functional homology of protein kinases required for sexual differentiation in Schizosaccharomyces pombe and Saccharomyces cerevisiae suggests a conserved signal transduction module in eukaryotic organisms. , 1993, Molecular biology of the cell.

[119]  A. Hinnebusch,et al.  Phosphorylation of initiation factor 2α by protein kinase GCN2 mediates gene-specific translational control of GCN4 in yeast , 1992, Cell.

[120]  J. Broach,et al.  The Saccharomyces cerevisiae YAK1 gene encodes a protein kinase that is induced by arrest early in the cell cycle , 1991, Molecular and cellular biology.

[121]  L. Johnston,et al.  The cell-cycle-regulated budding yeast gene DBF2, encoding a putative protein kinase, has a homologue that is not under cell-cycle control. , 1991, Gene.

[122]  Karen Lundgren,et al.  mik1 and wee1 cooperate in the inhibitory tyrosine phosphorylation of cdc2 , 1991, Cell.

[123]  D. E. Levin,et al.  A putative protein kinase gene (kin1+) is important for growth polarity in Schizosaccharomyces pombe. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[124]  J. Broach,et al.  Loss of Ras activity in Saccharomyces cerevisiae is suppressed by disruptions of a new kinase gene, YAKI, whose product may act downstream of the cAMP-dependent protein kinase. , 1989, Genes & development.

[125]  D. Hardie Protein phosphorylation and dephosphorylation. , 1989, Current opinion in cell biology.

[126]  D. E. Levin,et al.  Two yeast genes that encode unusual protein kinases. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[127]  Michael Wigler,et al.  Three different genes in S. cerevisiae encode the catalytic subunits of the cAMP-dependent protein kinase , 1987, Cell.