Fast lipid disorientation at the onset of membrane fusion revealed by molecular dynamics simulations.

Membrane fusion is a key event in vesicular trafficking in every cell, and many fusion-related proteins have been identified. However, how the actual fusion event occurs has not been elucidated. By using molecular dynamics simulations we found that when even a small region of two membranes is closely apposed such that only a limited number of water molecules remain in the apposed area (e.g., by a fusogenic protein and thermal membrane fluctuations), dramatic lipid disorientation results within 100 ps-2 ns, which might initiate membrane fusion. Up to 12% of phospholipid molecules in the apposing layers had their alkyl chains outside the hydrophobic region, lying almost parallel to the membrane surface or protruding out of the bilayer by 2 ns after two membranes were closely apposed.

[1]  A. Podtelejnikov,et al.  Endophilin I mediates synaptic vesicle formation by transfer of arachidonate to lysophosphatidic acid , 1999, Nature.

[2]  J. S. Hyde,et al.  Spin-label studies on phosphatidylcholine-cholesterol membranes: effects of alkyl chain length and unsaturation in the fluid phase. , 1986, Biochimica et biophysica acta.

[3]  P. P. Ewald Die Berechnung optischer und elektrostatischer Gitterpotentiale , 1921 .

[4]  J. Israelachvili,et al.  Polymer-cushioned bilayers. II. An investigation of interaction forces and fusion using the surface forces apparatus. , 1999, Biophysical journal.

[5]  K. Kawasaki,et al.  Membrane fusion of influenza virus with phosphatidylcholine liposomes containing viral receptors. , 1992, Biochemical and biophysical research communications.

[6]  J. Prestegard,et al.  Fusion of dimyristoyllecithin vesicles as studied by proton magnetic resonance spectroscopy. , 1974, Biochemistry.

[7]  A. Pirogov,et al.  Neutron-diffraction studies of YMnO3 , 2002 .

[8]  G Büldt,et al.  Neutron diffraction studies on phosphatidylcholine model membranes. I. Head group conformation. , 1979, Journal of molecular biology.

[9]  J. Rothman,et al.  Close Is Not Enough , 2000, The Journal of cell biology.

[10]  J. Nagle,et al.  Fluid phase structure of EPC and DMPC bilayers. , 1998, Chemistry and physics of lipids.

[11]  J. Nagle,et al.  Area/lipid of bilayers from NMR. , 1993, Biophysical journal.

[12]  J. Tabony,et al.  Quasielastic neutron scattering measurements of fast local translational diffusion of lipid molecules in phospholipid bilayers. , 1991, Biochimica et biophysica acta.

[13]  J. Seelig,et al.  The dynamic structure of fatty acyl chains in a phospholipid bilayer measured by deuterium magnetic resonance. , 1974, Biochemistry.

[14]  P. Bronk,et al.  An Early Stage of Membrane Fusion Mediated by the Low pH Conformation of Influenza Hemagglutinin Depends upon Membrane Lipids , 1997, The Journal of cell biology.

[15]  J. Skehel,et al.  Structure of influenza haemagglutinin at the pH of membrane fusion , 1994, Nature.

[16]  S. Harrison,et al.  Structural basis for membrane fusion by enveloped viruses. , 1999, Molecular membrane biology.

[17]  A. Kusumi,et al.  Hydrogen Bonding of Water to Phosphatidylcholine in the Membrane As Studied by a Molecular Dynamics Simulation: Location, Geometry, and Lipid-Lipid Bridging via Hydrogen-Bonded Water , 1997 .

[18]  A Kusumi,et al.  Molecular dynamics generation of nonarbitrary membrane models reveals lipid orientational correlations. , 2000, Biophysical journal.

[19]  I. Wilson,et al.  Structure of the haemagglutinin membrane glycoprotein of influenza virus at 3 Å resolution , 1981, Nature.

[20]  A Kusumi,et al.  Charge pairing of headgroups in phosphatidylcholine membranes: A molecular dynamics simulation study. , 1999, Biophysical journal.

[21]  J. R. Monck,et al.  The exocytotic fusion pore and neurotransmitter release , 1994, Neuron.

[22]  G. Melikyan,et al.  Inner but Not Outer Membrane Leaflets Control the Transition from Glycosylphosphatidylinositol-anchored Influenza Hemagglutinin-induced Hemifusion to Full Fusion , 1997, The Journal of cell biology.

[23]  D. Siegel Membrane-Membrane Interactions via Intermediates in Lamellar-to-Inverted Hexagonal Phase Transitions , 1987 .

[24]  W. Hubbell,et al.  Molecular motion in spin-labeled phospholipids and membranes. , 1971, Journal of the American Chemical Society.

[25]  Thorsten Lang,et al.  Membrane fusion. , 2002, Current opinion in cell biology.

[26]  B. de Kruijff,et al.  Gramicidin A induced fusion of large unilamellar dioleoylphosphatidylcholine vesicles and its relation to the induction of type II nonbilayer structures. , 1990, Biochemistry.

[27]  Bernard R. Brooks,et al.  Computer simulation of liquid/liquid interfaces. I. Theory and application to octane/water , 1995 .

[28]  A. Oberhauser,et al.  The exocytotic fusion pore modeled as a lipidic pore. , 1992, Biophysical journal.

[29]  Nobuaki Miyakawa,et al.  Development of MD Engine: High-speed accelerator with parallel processor design for molecular dynamics simulations , 1999, J. Comput. Chem..

[30]  J. Israelachvili,et al.  Molecular mechanisms and forces involved in the adhesion and fusion of amphiphilic bilayers. , 1989, Science.

[31]  Reinhard Jahn,et al.  Crystal structure of a SNARE complex involved in synaptic exocytosis at 2.4 Å resolution , 1998, Nature.

[32]  W. Xiao,et al.  The synaptic SNARE complex is a parallel four-stranded helical bundle , 1998, Nature Structural Biology.

[33]  B. Nölting Physical interactions that determine the properties of proteins , 1999 .

[34]  J. Israelachvili,et al.  Role of hydrophobic forces in bilayer adhesion and fusion. , 1992, Biochemistry.

[35]  S. Harrison,et al.  Atomic structure of the ectodomain from HIV-1 gp41 , 1997, Nature.