Advances in Engineering the Fly Genome with the CRISPR-Cas System
暂无分享,去创建一个
Ethan Bier | Melissa M. Harrison | E. Bier | Kate M. O’Connor-Giles | Jill Wildonger | Melissa M Harrison | Kate M O'Connor-Giles | Jill Wildonger
[1] C. F. CURTIS,et al. Possible Use of Translocations to fix Desirable Genes in Insect Pest Populations , 1968, Nature.
[2] K. Makino,et al. Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product , 1987, Journal of bacteriology.
[3] N. Nassif,et al. Targeted gene replacement in Drosophila via P element-induced gap repair , 1991, Science.
[4] J. B. Boyd,et al. Oligonucleotide-directed site-specific mutagenesis in Drosophila melanogaster. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[5] Y. Rong,et al. Gene targeting by homologous recombination in Drosophila. , 2000, Science.
[6] Dana Carroll,et al. Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases. , 2002, Genetics.
[7] K. Golic,et al. Ends-out, or replacement, gene targeting in Drosophila , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[8] Austin Burt,et al. Site-specific selfish genes as tools for the control and genetic engineering of natural populations , 2003, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[9] A. James. Gene drive systems in mosquitoes: rules of the road. , 2005, Trends in parasitology.
[10] R. Maeda,et al. An optimized transgenesis system for Drosophila using germ-line-specific φC31 integrases , 2007, Proceedings of the National Academy of Sciences.
[11] R. Barrangou,et al. CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes , 2007, Science.
[12] A. Burt,et al. The Population Genetics of Using Homing Endonuclease Genes in Vector and Pest Management , 2008, Genetics.
[13] J. Gall,et al. Efficient gene targeting in Drosophila by direct embryo injection with zinc-finger nucleases , 2008, Proceedings of the National Academy of Sciences.
[14] Y. Jan,et al. Efficient Ends-Out Gene Targeting In Drosophila , 2008, Genetics.
[15] D. Carroll,et al. Genetic Analysis of Zinc-Finger Nuclease-Induced Gene Targeting in Drosophila , 2009, Genetics.
[16] Stan J. J. Brouns,et al. CRISPR-based adaptive and heritable immunity in prokaryotes. , 2009, Trends in biochemical sciences.
[17] Wei Dong,et al. Directed, efficient, and versatile modifications of the Drosophila genome by genomic engineering , 2009, Proceedings of the National Academy of Sciences.
[18] Stan J. J. Brouns,et al. Evolution and classification of the CRISPR–Cas systems , 2011, Nature Reviews Microbiology.
[19] Nikhila S Tanneti,et al. Multiple Barriers to Nonhomologous DNA End Joining During Meiosis in Drosophila , 2012, Genetics.
[20] R. Barrangou,et al. Cas9–crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria , 2012, Proceedings of the National Academy of Sciences.
[21] J. Doudna,et al. A Programmable Dual-RNA–Guided DNA Endonuclease in Adaptive Bacterial Immunity , 2012, Science.
[22] A. James,et al. Transgenic Anopheles stephensi coexpressing single-chain antibodies resist Plasmodium falciparum development , 2012, Proceedings of the National Academy of Sciences.
[23] R. Jiao,et al. Efficient and specific modifications of the Drosophila genome by means of an easy TALEN strategy. , 2012, Journal of genetics and genomics = Yi chuan xue bao.
[24] S. Boulton,et al. Playing the end game: DNA double-strand break repair pathway choice. , 2012, Molecular cell.
[25] J. Haber,et al. Break-induced DNA replication. , 2013, Cold Spring Harbor perspectives in biology.
[26] Wei Zhang,et al. Dynamic Imaging of Genomic Loci in Living Human Cells by an Optimized CRISPR/Cas System , 2014, Cell.
[27] F. Baudat,et al. Meiotic recombination in mammals: localization and regulation , 2013, Nature Reviews Genetics.
[28] D. Carroll,et al. Donor DNA Utilization During Gene Targeting with Zinc-Finger Nucleases , 2013, G3: Genes, Genomes, Genetics.
[29] Anthony T. Do,et al. Double-Strand Break Repair Assays Determine Pathway Choice and Structure of Gene Conversion Events in Drosophila melanogaster , 2013, G3: Genes, Genomes, Genetics.
[30] David A. Scott,et al. Double Nicking by RNA-Guided CRISPR Cas9 for Enhanced Genome Editing Specificity , 2013, Cell.
[31] Le Cong,et al. Multiplex Genome Engineering Using CRISPR/Cas Systems , 2013, Science.
[32] Prashant Mali,et al. Orthogonal Cas9 Proteins for RNA-Guided Gene Regulation and Editing , 2013, Nature Methods.
[33] A. Burt,et al. Modelling the spatial spread of a homing endonuclease gene in a mosquito population , 2013, The Journal of applied ecology.
[34] Jianzhong Xi,et al. Optimized gene editing technology for Drosophila melanogaster using germ line-specific Cas9 , 2013, Proceedings of the National Academy of Sciences.
[35] Dong-Yeon Cho,et al. DNA copy number evolution in Drosophila cell lines , 2014, Genome Biology.
[36] Chris P. Ponting,et al. Highly Efficient Targeted Mutagenesis of Drosophila with the CRISPR/Cas9 System , 2013, Cell reports.
[37] G. Church,et al. CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering , 2013, Nature Biotechnology.
[38] Melissa M. Harrison,et al. Genome Engineering of Drosophila with the CRISPR RNA-Guided Cas9 Nuclease , 2013, Genetics.
[39] Nicholas E. Propson,et al. Efficient genome engineering in human pluripotent stem cells using Cas9 from Neisseria meningitidis , 2013, Proceedings of the National Academy of Sciences.
[40] Luke A. Gilbert,et al. Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression , 2013, Cell.
[41] Jennifer Doudna,et al. RNA-programmed genome editing in human cells , 2013, eLife.
[42] James E. DiCarlo,et al. RNA-Guided Human Genome Engineering via Cas9 , 2013, Science.
[43] Julian Lange,et al. Self-organization of meiotic recombination initiation: general principles and molecular pathways. , 2014, Annual review of genetics.
[44] Wei Zhang,et al. Dynamic Imaging of Genomic Loci in Living Human Cells by an Optimized CRISPR/Cas System , 2014, Cell.
[45] Simon L. Bullock,et al. Optimized CRISPR/Cas tools for efficient germline and somatic genome engineering in Drosophila , 2014, Proceedings of the National Academy of Sciences.
[46] U. Gaul,et al. Efficient chromosomal gene modification with CRISPR/cas9 and PCR-based homologous recombination donors in cultured Drosophila cells , 2014, Nucleic acids research.
[47] N. Perrimon,et al. Cas9-based genome editing in Drosophila. , 2014, Methods in enzymology.
[48] Y. Rong,et al. Efficient Gene Knock-out and Knock-in with Transgenic Cas9 in Drosophila , 2014, G3: Genes, Genomes, Genetics.
[49] E. Lander,et al. Genetic Screens in Human Cells Using the CRISPR-Cas9 System , 2013, Science.
[50] C. Rubinstein,et al. Highly Specific and Efficient CRISPR/Cas9-Catalyzed Homology-Directed Repair in Drosophila , 2014, Genetics.
[51] Neville E. Sanjana,et al. Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells , 2014, Science.
[52] Shiyou Zhu,et al. High-throughput screening of a CRISPR/Cas9 library for functional genomics in human cells , 2014, Nature.
[53] Yunde Zhao,et al. Self-processing of ribozyme-flanked RNAs into guide RNAs in vitro and in vivo for CRISPR-mediated genome editing. , 2014, Journal of integrative plant biology.
[54] Benjamin L. Oakes,et al. Programmable RNA recognition and cleavage by CRISPR/Cas9 , 2014, Nature.
[55] Austin Burt,et al. Heritable strategies for controlling insect vectors of disease , 2014, Philosophical Transactions of the Royal Society B: Biological Sciences.
[56] Jin-Soo Kim,et al. Analysis of off-target effects of CRISPR/Cas-derived RNA-guided endonucleases and nickases , 2014, Genome research.
[57] Jennifer A. Doudna,et al. DNA interrogation by the CRISPR RNA-guided endonuclease Cas9 , 2014, Nature.
[58] Lu-ping Liu,et al. Performance of the Cas9 Nickase System in Drosophila melanogaster , 2014, G3: Genes, Genomes, Genetics.
[59] Yilong Li,et al. Genome-wide recessive genetic screening in mammalian cells with a lentiviral CRISPR-guide RNA library , 2013, Nature Biotechnology.
[60] J. Ward,et al. Rapid and Precise Engineering of the Caenorhabditis elegans Genome with Lethal Mutation Co-Conversion and Inactivation of NHEJ Repair , 2014, Genetics.
[61] Andrew R. Bassett,et al. CRISPR/Cas9 mediated genome engineering in Drosophila. , 2014, Methods.
[62] Ronald D. Vale,et al. A Protein-Tagging System for Signal Amplification in Gene Expression and Fluorescence Imaging , 2014, Cell.
[63] Melissa M. Harrison,et al. A CRISPR view of development , 2014, Genes & development.
[64] Gene W. Yeo,et al. Applications of Cas 9 as an RNA-programmed RNA-binding protein , 2015 .
[65] Luke A. Gilbert,et al. Engineering Complex Synthetic Transcriptional Programs with CRISPR RNA Scaffolds , 2015, Cell.
[66] Eugene V Koonin,et al. Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems. , 2015, Molecular cell.
[67] Alexander Deiters,et al. Optical Control of CRISPR/Cas9 Gene Editing. , 2015, Journal of the American Chemical Society.
[68] James E. DiCarlo,et al. RNA-guided gene drives can efficiently bias inheritance in wild yeast , 2015, bioRxiv.
[69] Gene W. Yeo,et al. Applications of Cas9 as an RNA-programmed RNA-binding protein. , 2015, BioEssays : news and reviews in molecular, cellular and developmental biology.
[70] George M. Church,et al. Safeguarding gene drive experiments in the laboratory , 2015, Science.
[71] Yuta Nihongaki,et al. Photoactivatable CRISPR-Cas9 for optogenetic genome editing , 2015, Nature Biotechnology.
[72] Ethan Bier,et al. Highly efficient Cas9-mediated gene drive for population modification of the malaria vector mosquito Anopheles stephensi , 2015, Proceedings of the National Academy of Sciences.
[73] Shaojie Zhang,et al. Multicolor CRISPR labeling of chromosomal loci in human cells , 2015, Proceedings of the National Academy of Sciences.
[74] Mathieu Blanchette,et al. PAM multiplicity marks genomic target sites as inhibitory to CRISPR-Cas9 editing , 2015, Nature communications.
[75] Andrew R. Bassett,et al. A Genome-Wide CRISPR Library for High-Throughput Genetic Screening in Drosophila Cells , 2015, Journal of genetics and genomics = Yi chuan xue bao.
[76] N. Perrimon,et al. In Vivo Transcriptional Activation Using CRISPR/Cas9 in Drosophila , 2015, Genetics.
[77] John G Doench,et al. Genetic screens and functional genomics using CRISPR/Cas9 technology , 2015, The FEBS journal.
[78] Sita J. Saunders,et al. An updated evolutionary classification of CRISPR–Cas systems , 2015, Nature Reviews Microbiology.
[79] Melissa M. Harrison,et al. Precise Genome Editing of Drosophila with CRISPR RNA-Guided Cas9. , 2015, Methods in molecular biology.
[80] Neville E. Sanjana,et al. High-throughput functional genomics using CRISPR–Cas9 , 2015, Nature Reviews Genetics.
[81] David A. Scott,et al. In vivo genome editing using Staphylococcus aureus Cas9 , 2015, Nature.
[82] J. Haber. TOPping Off Meiosis. , 2015, Molecular cell.
[83] J. Rinn,et al. Multiplexable, locus-specific targeting of long RNAs with CRISPR-Display , 2015, Nature Methods.
[84] Melissa M. Harrison,et al. CRISPR‐Cas9 Genome Editing in Drosophila , 2015, Current protocols in molecular biology.
[85] Ethan Bier,et al. The mutagenic chain reaction: A method for converting heterozygous to homozygous mutations , 2015, Science.
[86] Yishi Jin,et al. Optogenetic mutagenesis in Caenorhabditis elegans , 2015, Nature Communications.
[87] A. Regev,et al. Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System , 2015, Cell.
[88] Feng Zhang,et al. A split-Cas9 architecture for inducible genome editing and transcription modulation , 2015, Nature Biotechnology.
[89] C. Gersbach,et al. A light-inducible CRISPR/Cas9 system for control of endogenous gene activation , 2015, Nature chemical biology.
[90] N. Perrimon,et al. Highly-efficient Cas9-mediated transcriptional programming , 2015, Nature Methods.
[91] Kabin Xie,et al. Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system , 2015, Proceedings of the National Academy of Sciences.
[92] Charles E. Vejnar,et al. CRISPRscan: designing highly efficient sgRNAs for CRISPR/Cas9 targeting in vivo , 2015, Nature Methods.
[93] F. Diao,et al. Plug-and-play genetic access to drosophila cell types using exchangeable exon cassettes. , 2015, Cell reports.
[94] B. Meyer,et al. Dramatic Enhancement of Genome Editing by CRISPR/Cas9 Through Improved Guide RNA Design , 2015, Genetics.
[95] N. Perrimon,et al. Identification of potential drug targets for tuberous sclerosis complex by synthetic screens combining CRISPR-based knockouts with RNAi , 2015, Science Signaling.
[96] J. Haber. TOPping off meiosis , 2015, Molecular cell.
[97] Andrea Crisanti,et al. A CRISPR-Cas 9 gene drive system targeting female reproduction in the malaria mosquito vector Anopheles gambiae , 2015 .
[98] Shaojie Zhang,et al. CRISPR-Cas9 nuclear dynamics and target recognition in living cells , 2016, The Journal of cell biology.
[99] A. Cheng,et al. Casilio: a versatile CRISPR-Cas9-Pumilio hybrid for gene regulation and genomic labeling , 2016, Cell Research.
[100] Shaojie Zhang,et al. Multiplexed labeling of genomic loci with dCas9 and engineered sgRNAs using CRISPRainbow , 2016, Nature Biotechnology.
[101] C. Potter,et al. Non-Mendelian Dominant Maternal Effects Caused by CRISPR/Cas9 Transgenic Components in Drosophila melanogaster , 2016, G3: Genes, Genomes, Genetics.
[102] Design and Generation of Drosophila Single Guide RNA Expression Constructs. , 2016, Cold Spring Harbor protocols.
[103] Ji-Long Liu,et al. Effective knockdown of Drosophila long non-coding RNAs by CRISPR interference , 2016, Nucleic acids research.
[104] Esteban O. Mazzoni,et al. CRISPR-dCas9 and sgRNA scaffolds enable dual-colour live imaging of satellite sequences and repeat-enriched individual loci , 2016, Nature Communications.
[105] Philipp W. Messer,et al. Evolution of Resistance Against CRISPR/Cas9 Gene Drive , 2016, Genetics.
[106] N. Perrimon,et al. Detection of Indel Mutations in Drosophila by High-Resolution Melt Analysis (HRMA). , 2016, Cold Spring Harbor protocols.
[107] Antonia A. Dominguez,et al. Transcriptional regulation of hepatic lipogenesis , 2015, Nature Reviews Molecular Cell Biology.
[108] S. Bullock,et al. Creating Heritable Mutations in Drosophila with CRISPR-Cas9. , 2016, Methods in molecular biology.
[109] Martin J. Aryee,et al. Genome-wide specificities of CRISPR-Cas Cpf1 nucleases in human cells , 2016, Nature Biotechnology.
[110] David R. Liu,et al. Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage , 2016, Nature.
[111] Eric S. Lander,et al. C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector , 2016, Science.
[112] E. Bier,et al. The dawn of active genetics , 2016, BioEssays : news and reviews in molecular, cellular and developmental biology.
[113] Simon L. Bullock,et al. Augmenting CRISPR applications in Drosophila with tRNA-flanked sgRNAs , 2016, Nature Methods.
[114] N. Perrimon,et al. Design and Generation of Donor Constructs for Genome Engineering in Drosophila. , 2016, Cold Spring Harbor protocols.
[115] Luke A. Gilbert,et al. Versatile protein tagging in cells with split fluorescent protein , 2016, Nature Communications.
[116] A. Clark,et al. Evolution of Resistance Against CRISPR/Cas9 Gene Drive , 2016, Genetics.
[117] N. Perrimon,et al. Cas9-Mediated Genome Engineering in Drosophila melanogaster. , 2016, Cold Spring Harbor protocols.
[118] K. Förstemann,et al. A Comprehensive Toolbox for Genome Editing in Cultured Drosophila melanogaster Cells , 2016, G3: Genes, Genomes, Genetics.
[119] P. Zamore,et al. Rapid Screening for CRISPR-Directed Editing of the Drosophila Genome Using white Coconversion , 2016, G3: Genes, Genomes, Genetics.
[120] Meagan E. Sullender,et al. Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9 , 2015, Nature Biotechnology.
[121] N. Perrimon,et al. Comparing CRISPR and RNAi-based screening technologies , 2016, Nature Biotechnology.
[122] James A. Gagnon,et al. Whole-organism lineage tracing by combinatorial and cumulative genome editing , 2016, Science.
[123] Wendell A. Lim,et al. Expanding the CRISPR imaging toolset with Staphylococcus aureus Cas9 for simultaneous imaging of multiple genomic loci , 2016, Nucleic acids research.
[124] C. Potter,et al. Editing Transgenic DNA Components by Inducible Gene Replacement in Drosophila melanogaster , 2016, Genetics.
[125] J. Kent,et al. Evaluation of off-target and on-target scoring algorithms and integration into the guide RNA selection tool CRISPOR , 2016, Genome Biology.
[126] Jennifer A. Doudna,et al. Programmable RNA Tracking in Live Cells with CRISPR/Cas9 , 2016, Cell.
[127] Feng Zhang,et al. An RNA-aptamer-based two-color CRISPR labeling system , 2016, Scientific Reports.
[128] Andrea Crisanti,et al. A CRISPR-Cas9 Gene Drive System Targeting Female Reproduction in the Malaria Mosquito vector Anopheles gambiae , 2015, Nature Biotechnology.
[129] Philippa C. Griffin,et al. Tropical Drosophila pandora carry Wolbachia infections causing cytoplasmic incompatibility or male killing , 2016, Evolution; international journal of organic evolution.
[130] P. Wittkopp,et al. Tools and strategies for scarless allele replacement in Drosophila using CRISPR/Cas9 , 2017, Fly.
[131] M. Wade,et al. CRISPR/Cas9 gene drives in genetically variable and nonrandomly mating wild populations , 2016, Science Advances.
[132] J. Sekelsky. DNA Repair in Drosophila: Mutagens, Models, and Missing Genes , 2017, Genetics.