Mathematical Analysis of Chemical Reaction Systems
暂无分享,去创建一个
[1] David Angeli,et al. Persistence Results for Chemical Reaction Networks with Time-Dependent Kinetics and No Global Conservation Laws , 2011, SIAM J. Appl. Math..
[2] Rudolf Wegscheider,et al. Über simultane Gleichgewichte und die Beziehungen zwischen Thermodynamik und Reactionskinetik homogener Systeme , 1901 .
[3] Murad Banaji,et al. Some Results on Injectivity and Multistationarity in Chemical Reaction Networks , 2013, SIAM J. Appl. Dyn. Syst..
[4] A. Tudorascu,et al. Chemical reaction-diffusion networks: convergence of the method of lines , 2017, Journal of Mathematical Chemistry.
[5] R. Jackson,et al. General mass action kinetics , 1972 .
[6] Bernd Sturmfels,et al. Siphons in Chemical Reaction Networks , 2009, Bulletin of mathematical biology.
[7] G N Lewis,et al. A New Principle of Equilibrium. , 1925, Proceedings of the National Academy of Sciences of the United States of America.
[8] Thomas G. Kurtz,et al. Finite Time Distributions of Stochastically Modeled Chemical Systems with Absolute Concentration Robustness , 2016, SIAM J. Appl. Dyn. Syst..
[9] F. Horn. Necessary and sufficient conditions for complex balancing in chemical kinetics , 1972 .
[10] B. M. Fulk. MATH , 1992 .
[11] Martin Feinberg,et al. Multiple Equilibria in Complex Chemical Reaction Networks: Ii. the Species-reactions Graph , 2022 .
[12] K. Fellner,et al. Convergence to equilibrium of renormalised solutions to nonlinear chemical reaction–diffusion systems , 2017, 1708.01427.
[13] Matthew D. Johnston,et al. Linear conjugacy of chemical reaction networks , 2011, 1101.1663.
[14] M. Feinberg,et al. Understanding bistability in complex enzyme-driven reaction networks. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[15] Badal Joshi,et al. A survey of methods for deciding whether a reaction network is multistationary , 2014, 1412.5257.
[16] B. L. Clarke. Stability of Complex Reaction Networks , 2007 .
[17] Gheorghe Craciun,et al. Robust Persistence and Permanence of Polynomial and Power Law Dynamical Systems , 2017, SIAM J. Appl. Math..
[18] M. Feinberg. The existence and uniqueness of steady states for a class of chemical reaction networks , 1995 .
[19] Gilles Gnacadja,et al. An Invitation to Pharmacostatics , 2019, Bulletin of mathematical biology.
[20] J. Bauer,et al. Chemical reaction network theory for in-silico biologists , 2003 .
[21] Martin Feinberg,et al. Multiple Equilibria in Complex Chemical Reaction Networks: Semiopen Mass Action Systems * , 2022 .
[22] J. Higgins,et al. Some remarks on Shear's Liapunov function for systems of chemical reactions. , 1968, Journal of theoretical biology.
[23] U. Alon. An introduction to systems biology : design principles of biological circuits , 2019 .
[24] D Shear,et al. An analog of the Boltzmann H-theorem (a Liapunov function) for systems of coupled chemical reactions. , 1967, Journal of theoretical biology.
[25] Georg Regensburger,et al. Generalized Mass Action Systems: Complex Balancing Equilibria and Sign Vectors of the Stoichiometric and Kinetic-Order Subspaces , 2012, SIAM J. Appl. Math..
[26] Brian Ingalls,et al. Mathematical Modeling in Systems Biology: An Introduction , 2013 .
[27] Fedor Nazarov,et al. Persistence and Permanence of Mass-Action and Power-Law Dynamical Systems , 2010, SIAM J. Appl. Math..
[28] Polly Y. Yu,et al. A generalization of Birchs theorem and vertex-balanced steady states for generalized mass-action systems. , 2018, Mathematical biosciences and engineering : MBE.
[29] Bao Quoc Tang,et al. Trend to Equilibrium for Reaction-Diffusion Systems Arising from Complex Balanced Chemical Reaction Networks , 2016, SIAM J. Math. Anal..
[30] Eberhard O. Voit,et al. 150 Years of the Mass Action Law , 2015, PLoS Comput. Biol..
[31] James Wei,et al. The Structure and Analysis of Complex Reaction Systems , 1962 .
[32] Badal Joshi,et al. Simplifying the Jacobian Criterion for Precluding Multistationarity in Chemical Reaction Networks , 2011, SIAM J. Appl. Math..
[33] Hidde de Jong,et al. Modeling and Simulation of Genetic Regulatory Systems: A Literature Review , 2002, J. Comput. Biol..
[34] James B. Rawlings,et al. The QSSA in Chemical Kinetics: As Taught and as Practiced , 2014 .
[35] M. Feinberg,et al. Dynamics of open chemical systems and the algebraic structure of the underlying reaction network , 1974 .
[36] L. Onsager. Reciprocal Relations in Irreversible Processes. II. , 1931 .
[37] Julien Clinton Sprott,et al. Coexistence and chaos in complex ecologies , 2005 .
[38] Péter Érdi,et al. Mathematical models of chemical reactions , 1989 .
[39] Alicia Dickenstein,et al. Toric dynamical systems , 2007, J. Symb. Comput..
[40] Murad Banaji,et al. P Matrix Properties, Injectivity, and Stability in Chemical Reaction Systems , 2007, SIAM J. Appl. Math..
[41] Thomas G. Kurtz,et al. Stochastic Analysis of Biochemical Systems , 2015 .
[42] Alicia Dickenstein,et al. Sign Conditions for Injectivity of Generalized Polynomial Maps with Applications to Chemical Reaction Networks and Real Algebraic Geometry , 2013, Found. Comput. Math..
[43] T. Kurtz. The Relationship between Stochastic and Deterministic Models for Chemical Reactions , 1972 .
[44] S. Schnell,et al. Reaction kinetics in intracellular environments with macromolecular crowding: simulations and rate laws. , 2004, Progress in biophysics and molecular biology.
[45] Elisenda Feliu,et al. Preclusion of switch behavior in networks with mass-action kinetics , 2012, Appl. Math. Comput..
[46] Martin Feinberg,et al. Multiple Equilibria in Complex Chemical Reaction Networks: I. the Injectivity Property * , 2006 .
[47] Murad Banaji,et al. Graph-theoretic approaches to injectivity and multiple equilibria in systems of interacting elements , 2009, 0903.1190.
[48] B. Boros,et al. On the existence of the positive steady states of weakly reversible deficiency-one mass action systems. , 2013, Mathematical biosciences.
[49] Gheorghe Craciun,et al. Identifiability of chemical reaction networks , 2008 .
[50] Casian Pantea,et al. On the Persistence and Global Stability of Mass-Action Systems , 2011, SIAM J. Math. Anal..
[51] David F. Anderson,et al. A Proof of the Global Attractor Conjecture in the Single Linkage Class Case , 2011, SIAM J. Appl. Math..
[52] Carsten Wiuf,et al. Lyapunov Functions, Stationary Distributions, and Non-equilibrium Potential for Reaction Networks , 2015, Bulletin of mathematical biology.
[53] G. Craciun,et al. Graph-theoretic conditions for zero-eigenvalue Turing instability in general chemical reaction networks. , 2013, Mathematical biosciences and engineering : MBE.
[54] Rud. Wegscheider. Über simultane Gleichgewichte und die Beziehungen zwischen Thermodynamik und Reaktionskinetik homogener Systeme , 1902 .
[55] M. Feinberg. Chemical reaction network structure and the stability of complex isothermal reactors—I. The deficiency zero and deficiency one theorems , 1987 .
[56] Michael A. Savageau,et al. Introduction to S-systems and the underlying power-law formalism , 1988 .
[57] D. Siegel,et al. Global stability of complex balanced mechanisms , 2000 .
[58] Shigeru Kondo,et al. Reaction-Diffusion Model as a Framework for Understanding Biological Pattern Formation , 2010, Science.
[59] Ezra Miller,et al. A Geometric Approach to the Global Attractor Conjecture , 2013, SIAM J. Appl. Dyn. Syst..
[60] Martin Feinberg,et al. Concordant chemical reaction networks and the Species-Reaction Graph. , 2012, Mathematical biosciences.
[61] Gábor Szederkényi,et al. A linear programming approach to weak reversibility and linear conjugacy of chemical reaction networks , 2011, Journal of Mathematical Chemistry.
[62] Martin Feinberg,et al. Concordant chemical reaction networks. , 2011, Mathematical biosciences.
[63] David F. Anderson,et al. Product-Form Stationary Distributions for Deficiency Zero Chemical Reaction Networks , 2008, Bulletin of mathematical biology.
[64] Elisenda Feliu,et al. Preclusion of switch behavior in reaction networks with mass-action kinetics , 2011, 1109.5149.
[65] Eduardo D. Sontag. Structure and stability of certain chemical networks and applications to the kinetic proofreading model of T-cell receptor signal transduction , 2001, IEEE Trans. Autom. Control..
[66] Sauro Succi. INVARIANT MANIFOLDS FOR PHYSICAL AND CHEMICAL KINETICS (Lecture Notes in Physics 660) By A. N. G ORBAN and I. V. K ARLIN : 495 pp., £77, ISBN 3-540-22684-2 (Springer, Heidelberg, 2005) , 2006 .
[67] Raoul Kopelman,et al. Fractal Reaction Kinetics , 1988, Science.
[68] M. Feinberg. Complex balancing in general kinetic systems , 1972 .
[69] Gheorghe Craciun,et al. Toric Differential Inclusions and a Proof of the Global Attractor Conjecture , 2015, 1501.02860.
[70] R. Aris. Prolegomena to the rational analysis of systems of chemical reactions , 1965 .