Simple and Fast Inverse Alignment
暂无分享,去创建一个
[1] D Gusfield,et al. Parametric and inverse-parametric sequence alignment with XPARAL. , 1996, Methods in enzymology.
[2] Jerrold R. Griggs,et al. On the number of alignments ofk sequences , 1990, Graphs Comb..
[3] S. Henikoff,et al. Amino acid substitution matrices from protein blocks. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[4] David Fernández-Baca,et al. Inverse parametric sequence alignment , 2004, J. Algorithms.
[5] John D. Kececioglu,et al. Aligning alignments exactly , 2004, RECOMB.
[6] David Fernández-Baca,et al. Bounds for parametric sequence comparison , 2002, Discret. Appl. Math..
[7] Richard M. Karp,et al. On Linear Characterizations of Combinatorial Optimization Problems , 1982, SIAM J. Comput..
[8] David Eppstein,et al. Finding the k shortest paths , 1994, Proceedings 35th Annual Symposium on Foundations of Computer Science.
[9] Dan Gusfield,et al. Parametric optimization of sequence alignment , 1992, SODA '92.
[10] S. Balaji,et al. PALI: a database of alignments and phylogeny of homologous protein structures , 2001, Bioinform..
[11] A G Murzin,et al. SCOP: a structural classification of proteins database for the investigation of sequences and structures. , 1995, Journal of molecular biology.
[12] M. O. Dayhoff,et al. 22 A Model of Evolutionary Change in Proteins , 1978 .
[13] Lior Pachter,et al. Parametric inference for biological sequence analysis. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[14] Martin Grötschel,et al. The ellipsoid method and its consequences in combinatorial optimization , 1981, Comb..
[15] S. Balaji,et al. PALI - a database of Phylogeny and ALIgnment of homologous protein structures , 2001, Nucleic Acids Res..
[16] E. Lander,et al. Parametric sequence comparisons. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[17] Thomas Lengauer,et al. Fast and numerically stable parametric alignment of biosequences , 1997, RECOMB '97.