RmlC, a C3' and C5' carbohydrate epimerase, appears to operate via an intermediate with an unusual twist boat conformation.

[1]  G. Schneider,et al.  Three-dimensional structure of iminodisuccinate epimerase defines the fold of the MmgE/PrpD protein family. , 2006, Journal of molecular biology.

[2]  S. Withers,et al.  An Atypical Approach Identifies TYR234 as the Key Base Catalyst in Chondroitin AC Lyase , 2006, Chembiochem : a European journal of chemical biology.

[3]  C. Walsh,et al.  Characterisation of Streptomyces spheroides NovW and revision of its functional assignment to a dTDP-6-deoxy-D-xylo-4-hexulose 3-epimerase. , 2006, Chemical communications.

[4]  L. Major,et al.  Structure and function of GDP-mannose-3',5'-epimerase: an enzyme which performs three chemical reactions at the same active site. , 2005, Journal of the American Chemical Society.

[5]  R. Field,et al.  Synthesis and evaluation of mimetics of UDP and UDP-α-D-galactose, dTDP and dTDP-α-D-glucose with monosaccharides replacing the key pyrophosphate unit , 2005 .

[6]  J. Mills,et al.  Inactivation of the Mycobacterial Rhamnosyltransferase, Which Is Needed for the Formation of the Arabinogalactan-Peptidoglycan Linker, Leads to Irreversible Loss of Viability* , 2004, Journal of Biological Chemistry.

[7]  A. Paiardini,et al.  Site-directed Mutagenesis Provides Insight into Racemization and Transamination of Alanine Catalyzed by Treponema denticola Cystalysin* , 2004, Journal of Biological Chemistry.

[8]  C. Walsh,et al.  The Position of a Key Tyrosine in dTDP-4-Keto-6-deoxy-D-glucose-5-epimerase (EvaD) Alters the Substrate Profile for This RmlC-like Enzyme* , 2004, Journal of Biological Chemistry.

[9]  A. Zemla,et al.  Mycobacterium tuberculosis RmlC epimerase (Rv3465): a promising drug-target structure in the rhamnose pathway. , 2004, Acta crystallographica. Section D, Biological crystallography.

[10]  J. Naismith,et al.  Novel inhibitors of an emerging target in Mycobacterium tuberculosis; substituted thiazolidinones as inhibitors of dTDP-rhamnose synthesis. , 2003, Bioorganic & medicinal chemistry letters.

[11]  D. Philp,et al.  The structure of NADH in the enzyme dTDP-d-glucose dehydratase (RmlB). , 2003, Journal of the American Chemical Society.

[12]  J. Naismith,et al.  Structural and mechanistic basis of bacterial sugar nucleotide-modifying enzymes. , 2003, Biochemistry.

[13]  E. P. Maziarz,et al.  Formation and stability of the enolates of N-protonated proline methyl ester and proline zwitterion in aqueous solution: a nonenzymatic model for the first step in the racemization of proline catalyzed by proline racemase. , 2003, Biochemistry.

[14]  D. Maskell,et al.  High-resolution structures of RmlC from Streptococcus suis in complex with substrate analogs locate the active site of this class of enzyme. , 2003, Structure.

[15]  Yufang Ma,et al.  Formation of dTDP-Rhamnose Is Essential for Growth of Mycobacteria , 2002, Journal of bacteriology.

[16]  Gordon Leonard,et al.  Variation on a theme of SDR. dTDP-6-deoxy-L- lyxo-4-hexulose reductase (RmlD) shows a new Mg2+-dependent dimerization mode. , 2002, Structure.

[17]  C. Roos,et al.  Cloning and expression of Helicobacter pylori GDP-l-fucose synthesizing enzymes (GMD and GMER) in Saccharomyces cerevisiae. , 2001, European journal of biochemistry.

[18]  J. Naismith,et al.  Epimerases: structure, function and mechanism , 2001, Cellular and Molecular Life Sciences CMLS.

[19]  J. Naismith,et al.  Carbohydrate-protein recognition: molecular dynamics simulations and free energy analysis of oligosaccharide binding to concanavalin A. , 2001, Biophysical journal.

[20]  Scott G. Franzblau,et al.  Drug Targeting Mycobacterium tuberculosis Cell Wall Synthesis: Genetics of dTDP-Rhamnose Synthetic Enzymes and Development of a Microtiter Plate-Based Screen for Inhibitors of Conversion of dTDP-Glucose to dTDP-Rhamnose , 2001, Antimicrobial Agents and Chemotherapy.

[21]  M. E. Tanner Sugar Nucleotide-Modifying Enzymes , 2001 .

[22]  J. Naismith,et al.  The structural basis of the catalytic mechanism and regulation of glucose‐1‐phosphate thymidylyltransferase (RmlA) , 2000, The EMBO journal.

[23]  L. Burrows,et al.  Involvement of the rml locus in core oligosaccharide and O polysaccharide assembly in Pseudomonas aeruginosa. , 2000, Microbiology.

[24]  E. Pai,et al.  Crystal Structure of dTDP-4-keto-6-deoxy-d-hexulose 3,5-Epimerase fromMethanobacterium thermoautotrophicum Complexed with dTDP* , 2000, The Journal of Biological Chemistry.

[25]  J. Naismith,et al.  RmlC, the third enzyme of dTDP-L-rhamnose pathway, is a new class of epimerase , 2000, Nature Structural Biology.

[26]  C. Whitfield,et al.  The purification, crystallization and structural elucidation of dTDP-D-glucose 4,6-dehydratase (RmlB), the second enzyme of the dTDP-L-rhamnose synthesis pathway from Salmonella enterica serovar typhimurium. , 2000, Acta crystallographica. Section D, Biological crystallography.

[27]  R. Kumar,et al.  Stereochemical Course and Steady State Mechanism of the Reaction Catalyzed by the GDP-fucose Synthetase from Escherichia coli* , 1999, The Journal of Biological Chemistry.

[28]  C. Whitfield,et al.  Characterization of dTDP-4-dehydrorhamnose 3,5-Epimerase and dTDP-4-dehydrorhamnose Reductase, Required for dTDP-l-rhamnose Biosynthesis in Salmonella enterica Serovar Typhimurium LT2* , 1999, The Journal of Biological Chemistry.

[29]  Y. Shimazaki,et al.  Recombination between gtfB andgtfC Is Required for Survival of a dTDP-Rhamnose Synthesis-Deficient Mutant of Streptococcus mutans in the Presence of Sucrose , 1999, Infection and Immunity.

[30]  J. Naismith,et al.  Man α1-2 Man α-OMe-concanavalin A complex reveals a balance of forces involved in carbohydrate recognition , 1999 .

[31]  B. Wanner,et al.  Conversion of dTDP-4-keto-6-deoxyglucose to free dTDP-4-keto-rhamnose by the rmIC gene products of Escherichia coli and Mycobacterium tuberculosis. , 1999, Microbiology.

[32]  W. Somers,et al.  GDP-fucose synthetase from Escherichia coli: structure of a unique member of the short-chain dehydrogenase/reductase family that catalyzes two distinct reactions at the same active site. , 1998, Structure.

[33]  M. Bolognesi,et al.  GDP-4-keto-6-deoxy-D-mannose epimerase/reductase from Escherichia coli, a key enzyme in the biosynthesis of GDP-L-fucose, displays the structural characteristics of the RED protein homology superfamily. , 1998, Structure.

[34]  A. Vagin,et al.  MOLREP: an Automated Program for Molecular Replacement , 1997 .

[35]  T. Koga,et al.  Biological function of the dTDP-rhamnose synthesis pathway in Streptococcus mutans , 1997, Journal of bacteriology.

[36]  W. Klaffke,et al.  Substrate specificity of native dTDP-D-glucose-4,6-dehydratase: chemo-enzymatic syntheses of artificial and naturally occurring deoxy sugars. , 1996, Carbohydrate research.

[37]  M Krook,et al.  Short-chain dehydrogenases/reductases (SDR). , 1995, Biochemistry.

[38]  Collaborative Computational,et al.  The CCP4 suite: programs for protein crystallography. , 1994, Acta crystallographica. Section D, Biological crystallography.

[39]  J. Navaza,et al.  AMoRe: an automated package for molecular replacement , 1994 .

[40]  J. Thornton,et al.  PROCHECK: a program to check the stereochemical quality of protein structures , 1993 .

[41]  M. Sinnott,et al.  Leech sialidase L cleaves the glycon-aglycon bond with the substrate in a normally disfavored conformation , 1993 .

[42]  J. Zou,et al.  Improved methods for building protein models in electron density maps and the location of errors in these models. , 1991, Acta crystallographica. Section A, Foundations of crystallography.

[43]  N. Sharon,et al.  Lectins as cell recognition molecules. , 1989, Science.

[44]  L. Glaser,et al.  The mechanism of 6-deoxyhexose synthesis. II. Conversion of deoxythymidine diphosphate 4-keto-6-deoxy-D-glucose to deoxythymidine diphosphate L-rhamnose. , 1968, The Journal of biological chemistry.

[45]  R. Field,et al.  Synthesis and evaluation of mimetics of UDP and UDP-alpha-D-galactose, dTDP and dTDP-alpha-D-glucose with monosaccharides replacing the key pyrophosphate unit. , 2005, Organic & biomolecular chemistry.

[46]  D. Maskell,et al.  Toward a structural understanding of the dehydratase mechanism. , 2002, Structure.

[47]  A. Vasella,et al.  Glycosidase mechanisms. , 2002, Current opinion in chemical biology.

[48]  Dudley H. Williams,et al.  Characterisation of a sugar epimerase enzyme involved in the biosynthesis of a vancomycin-group antibiotic , 2000 .

[49]  K. Wilson,et al.  Efficient anisotropic refinement of macromolecular structures using FFT. , 1999, Acta crystallographica. Section D, Biological crystallography.

[50]  J. Naismith,et al.  Man alpha1-2 Man alpha-OMe-concanavalin A complex reveals a balance of forces involved in carbohydrate recognition. , 1999, Glycobiology.

[51]  P. Albersheim,et al.  Isolation and characterization of plant cell walls and cell wall components , 1986 .

[52]  E. Corey The Stereochemistry of α-Haloketones. V. Prediction of the Stereochemistry of α-Brominated Ketosteroids , 1954 .