Simultaneous segmentation of prostatic zones using Active Appearance Models with multiple coupled levelsets

In this work we present an improvement to the popular Active Appearance Model (AAM) algorithm, that we call the Multiple-Levelset AAM (MLA). The MLA can simultaneously segment multiple objects, and makes use of multiple levelsets, rather than anatomical landmarks, to define the shapes. AAMs traditionally define the shape of each object using a set of anatomical landmarks. However, landmarks can be difficult to identify, and AAMs traditionally only allow for segmentation of a single object of interest. The MLA, which is a landmark independent AAM, allows for levelsets of multiple objects to be determined and allows for them to be coupled with image intensities. This gives the MLA the flexibility to simulataneously segmentation multiple objects of interest in a new image. In this work we apply the MLA to segment the prostate capsule, the prostate peripheral zone (PZ), and the prostate central gland (CG), from a set of 40 endorectal, T2-weighted MRI images. The MLA system we employ in this work leverages a hierarchical segmentation framework, so constructed as to exploit domain specific attributes, by utilizing a given prostate segmentation to help drive the segmentations of the CG and PZ, which are embedded within the prostate. Our coupled MLA scheme yielded mean Dice accuracy values of .81, .79 and .68 for the prostate, CG, and PZ, respectively using a leave-one-out cross validation scheme over 40 patient studies. When only considering the midgland of the prostate, the mean DSC values were .89, .84, and .76 for the prostate, CG, and PZ respectively.

[1]  Michael J Ackerman,et al.  Engineering and algorithm design for an image processing Api: a technical report on ITK--the Insight Toolkit. , 2002, Studies in health technology and informatics.

[2]  Imam Samil Yetik,et al.  Automated prostate cancer localization without the need for peripheral zone extraction using multiparametric MRI. , 2011, Medical physics.

[3]  Timothy F. Cootes,et al.  Active Appearance Models , 2001, IEEE Trans. Pattern Anal. Mach. Intell..

[4]  Timothy F. Cootes,et al.  Texture enhanced appearance models , 2007, Comput. Vis. Image Underst..

[5]  W. Eric L. Grimson,et al.  An Integrated Visualization System for Surgical Planning and Guidance Using Image Fusion and Interventional Imaging , 1999, MICCAI.

[6]  Takeo Kanade,et al.  Image-consistent surface triangulation , 2000, Proceedings IEEE Conference on Computer Vision and Pattern Recognition. CVPR 2000 (Cat. No.PR00662).

[7]  Dimitris N. Metaxas,et al.  Automated detection of prostatic adenocarcinoma from high-resolution ex vivo MRI , 2005, IEEE Transactions on Medical Imaging.

[8]  R. Cohen,et al.  Transition zone carcinoma of the prostate gland: a common indolent tumour type that occasionally manifests aggressive behaviour , 2003, Pathology.

[9]  Anant Madabhushi,et al.  Integrating structural and functional imaging for computer assisted detection of prostate cancer on multi-protocol in vivo 3 Tesla MRI , 2009, Medical Imaging.

[10]  Siqi Chen,et al.  Segmenting the prostate and rectum in CT imagery using anatomical constraints , 2011, Medical Image Anal..

[11]  Olivier Colot,et al.  Combining a deformable model and a probabilistic framework for an automatic 3D segmentation of prostate on MRI , 2009, International Journal of Computer Assisted Radiology and Surgery.

[12]  Thomas Hambrock,et al.  Computer-assisted analysis of peripheral zone prostate lesions using T2-weighted and dynamic contrast enhanced T1-weighted MRI , 2010, Physics in medicine and biology.

[13]  A. Madabhushi,et al.  Deformable Landmark-Free Active Appearance Models : Application to Segmentation of Multi-Institutional Prostate MRI Data , 2012 .

[14]  Arthur Albert,et al.  Regression and the Moore-Penrose Pseudoinverse , 2012 .

[15]  M. J. D. Powell,et al.  An efficient method for finding the minimum of a function of several variables without calculating derivatives , 1964, Comput. J..

[16]  R. Lenkinski,et al.  Accurate prostate volume estimation using multifeature active shape models on T2-weighted MRI. , 2011, Academic radiology.

[17]  Jacek M. Zurada,et al.  An approach to multimodal biomedical image registration utilizing particle swarm optimization , 2004, IEEE Transactions on Evolutionary Computation.

[18]  Stefan Klein,et al.  Automatic segmentation of the prostate in 3D MR images by atlas matching using localized mutual information. , 2008, Medical physics.

[19]  Timothy F. Cootes,et al.  Multi-resolution search with active shape models , 1994, Proceedings of 12th International Conference on Pattern Recognition.

[20]  Thorsten Schlomm,et al.  Prostate cancers in the transition zone: Part 1; pathological aspects , 2004, BJU international.

[21]  R. Kikinis,et al.  Integration of interventional MRI with computer‐assisted surgery , 2001, Journal of magnetic resonance imaging : JMRI.

[22]  A. Villers,et al.  Prostate cancer characterization on MR images using fractal features. , 2010, Medical physics.

[23]  N Betrouni,et al.  Zonal segmentation of prostate using multispectral magnetic resonance images. , 2011, Medical physics.

[24]  Jocelyne Troccaz,et al.  Automated segmentation of the prostate in 3D MR images using a probabilistic atlas and a spatially constrained deformable model. , 2010, Medical physics.

[25]  William E. Lorensen,et al.  The NA-MIC Kit: ITK, VTK, pipelines, grids and 3D slicer as an open platform for the medical image computing community , 2006, 3rd IEEE International Symposium on Biomedical Imaging: Nano to Macro, 2006..

[26]  Hans-Peter Meinzer,et al.  Statistical shape models for 3D medical image segmentation: A review , 2009, Medical Image Anal..

[27]  Alejandro F. Frangi,et al.  Active shape model segmentation with optimal features , 2002, IEEE Transactions on Medical Imaging.

[28]  Martin Styner,et al.  Evaluation of 3D Correspondence Methods for Model Building , 2003, IPMI.

[29]  Maximilien Vermandel,et al.  Automatic segmentation of pelvic structures from magnetic resonance images for prostate cancer radiotherapy. , 2007, International journal of radiation oncology, biology, physics.

[30]  Hamid Soltanian-Zadeh,et al.  Effect of Number of Coupled Structures on the Segmentation of Brain Structures , 2009, J. Signal Process. Syst..

[31]  Yongyi Yang,et al.  Supervised and unsupervised methods for prostate cancer segmentation with multispectral MRI. , 2010, Medical physics.

[32]  M S Cohen,et al.  Rapid and effective correction of RF inhomogeneity for high field magnetic resonance imaging , 2000, Human brain mapping.

[33]  Simon Ameer-Beg,et al.  Biomedical Imaging: From Nano to Macro , 2008 .

[34]  R. Lenkinski,et al.  Central gland and peripheral zone prostate tumors have significantly different quantitative imaging signatures on 3 tesla endorectal, in vivo T2‐weighted MR imagery , 2012, Journal of magnetic resonance imaging : JMRI.

[35]  Anant Madabhushi,et al.  WERITAS: weighted ensemble of regional image textures for ASM segmentation , 2009, Medical Imaging.

[36]  Olivier D. Faugeras,et al.  Statistical shape influence in geodesic active contours , 2000, Proceedings IEEE Conference on Computer Vision and Pattern Recognition. CVPR 2000 (Cat. No.PR00662).

[37]  Evis Sala,et al.  Transition zone prostate cancers: features, detection, localization, and staging at endorectal MR imaging. , 2006, Radiology.

[38]  Ron Kikinis,et al.  3D Slicer , 2012, 2004 2nd IEEE International Symposium on Biomedical Imaging: Nano to Macro (IEEE Cat No. 04EX821).

[39]  Timothy F. Cootes,et al.  Active Shape Models-Their Training and Application , 1995, Comput. Vis. Image Underst..

[40]  Anant Madabhushi,et al.  Automated computer-derived prostate volumes from MR imaging data: comparison with radiologist-derived MR imaging and pathologic specimen volumes. , 2012, Radiology.

[41]  Paula Carter “Rh” , 2001, Angewandte Chemie.

[42]  Patrick Younes,et al.  Aspects IRM du cancer de la prostate , 2007 .

[43]  Hartwig Huland,et al.  Prostate cancers in the transition zone: Part 2; clinical aspects , 2004, BJU international.

[44]  W. Eric L. Grimson,et al.  Mutual information in coupled multi-shape model for medical image segmentation , 2004, Medical Image Anal..

[45]  Ramaswamy Manikandan,et al.  Prostate cancers in the transition zone: Part 2; clinical aspects , 2005, BJU international.