Chemical distance geometry: Current realization and future projection
暂无分享,去创建一个
[1] A. Pardi,et al. Limited sampling of conformational space by the distance geometry algorithm: implications for structures generated from NMR data. , 1989, Biochemistry.
[2] W. Glunt,et al. An alternating projection algorithm for computing the nearest euclidean distance matrix , 1990 .
[3] G. Crippen,et al. Linearized embedding: A new metric matrix algorithm for calculating molecular conformations subject to geometric constraints , 1989 .
[4] H Oschkinat,et al. Improved strategies for the determination of protein structures from NMR data: The solution structure of acyl carrier protein , 1989, FEBS letters.
[5] J H Prestegard,et al. A dynamic model for the structure of acyl carrier protein in solution. , 1989, Biochemistry.
[6] Gordon M. Crippen,et al. Combined use of stereospecific deuteration, NMR, distance geometry, and energy minimization for the conformational analysis of the highly .delta. opioid receptor selective peptide [D-Pen2,D-Pen5]enkephalin , 1990 .
[7] W. V. van Gunsteren,et al. Time-averaged nuclear Overhauser effect distance restraints applied to tendamistat. , 1990, Journal of molecular biology.
[8] H. Kushner. Asymptotic global behavior for stochastic approximation and diffusions with slowly decreasing noise effects: Global minimization via Monte Carlo , 1987 .
[9] K. Wuethrich,et al. The development of nuclear magnetic resonance spectroscopy as a technique for protein structure determination , 1989 .
[10] Gordon M. Crippen,et al. Conformational analysis by energy embedding , 1982 .
[11] G. M. Crippen,et al. Why energy embedding works , 1987 .
[12] Gordon M. Crippen,et al. Distance Geometry and Molecular Conformation , 1988 .
[13] Leonard M. Blumenthal,et al. Theory and applications of distance geometry , 1954 .
[14] Timothy F. Havel,et al. Computational experience with an algorithm for tetrangle inequality bound smoothing. , 1989, Bulletin of mathematical biology.
[15] R. Levy,et al. Solution structures of proteins from NMR data and modeling: alternative folds for neutrophil peptide 5. , 1989, Biochemistry.
[16] I. Kuntz,et al. [9] Distance geometry , 1989 .
[17] H A Scheraga,et al. An approach to the multiple-minima problem in protein folding by relaxing dimensionality. Tests on enkephalin. , 1987, Journal of molecular biology.
[18] M. Summers,et al. High-resolution structure of an HIV zinc fingerlike domain via a new NMR-based distance geometry approach. , 1990, Biochemistry.
[19] P. Kollman,et al. Computer simulation studies of spherands, crowns and porphyrins: application of computer graphics, distance geometry, molecular mechanics and molecular dynamics approaches , 1989 .
[20] G M Crippen,et al. Energy embedding of trypsin inhibitor , 1982, Biopolymers.
[21] T. Cross,et al. A method for the analytic determination of polypeptide structure using solid state nuclear magnetic resonance: The ‘‘metric method’’ , 1990 .
[22] K. Wüthrich. Protein structure determination in solution by nuclear magnetic resonance spectroscopy. , 1989, Science.
[23] R. Kaptein,et al. Determination of biomolecular structures from proton-proton NOE's using a relaxation matrix approach , 1988 .
[24] B. Hendrickson. The Molecular Problem: Determining Conformation from Pairwise Distances , 1990 .
[25] K. Wüthrich. NMR of proteins and nucleic acids , 1988 .
[26] P. Chiang,et al. Distance geometry of alpha-substituted 2,2-diphenylpropionate antimuscarinics. , 1989, Molecular pharmacology.
[27] H A Scheraga,et al. An approach to the multiple-minima problem by relaxing dimensionality. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[28] Gordon M. Crippen,et al. Global energy minimization by rotational energy embedding , 1990, J. Chem. Inf. Comput. Sci..
[29] A. Gronenborn,et al. Determination of three‐dimensional structures of proteins from interproton distance data by hybrid distance geometry‐dynamical simulated annealing calculations , 1988, FEBS letters.
[30] G. M. Crippen,et al. Use of augmented Lagrangians in the calculation of molecular conformations by distance geometry , 1988, J. Chem. Inf. Comput. Sci..
[31] M. Billeter,et al. Restrained energy refinement with two different algorithms and force fields of the structure of the α‐amylase inhibitor tendamistat determined by nmr in solution , 1990 .
[32] Timothy F. Havel,et al. The sampling properties of some distance geometry algorithms applied to unconstrained polypeptide chains: A study of 1830 independently computed conformations , 1990, Biopolymers.
[33] A. Gronenborn,et al. Determination of three‐dimensional structures of proteins from interproton distance data by dynamical simulated annealing from a random array of atoms Circumventing problems associated with folding , 1988, FEBS letters.
[34] G. Fox,et al. Distances as degrees of freedom. , 1989, Journal of biomolecular structure & dynamics.