A large scale Monte Carlo simulator for cellular microphysiology
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Scott B. Baden | Terrence J. Sejnowski | Gregory T. Balls | Tilman Kispersky | Thomas M. Bartol | T. Sejnowski | T. Bartol | G. Balls | S. Baden | Tilman Kispersky
[1] Scott B. Baden,et al. Efficient Run-Time Support for Irregular Block-Structured Applications , 1998, J. Parallel Distributed Comput..
[2] T. Bartol,et al. Monte Carlo simulation of miniature endplate current generation in the vertebrate neuromuscular junction. , 1991, Biophysical journal.
[3] J A McCammon,et al. Analysis of synaptic transmission in the neuromuscular junction using a continuum finite element model. , 1998, Biophysical journal.
[4] Joseph E. Flaherty,et al. A hierarchical partition model for adaptive finite element computation , 2000 .
[5] R. Roitzsch,et al. KASKADE 3.0 - An Object Oriented Adaptive Finite Element Code , 1995 .
[6] M Hines,et al. A program for simulation of nerve equations with branching geometries. , 1989, International journal of bio-medical computing.
[7] Scott B. Baden,et al. Abstract KeLP , 2001, PPSC.
[8] Shahid H. Bokhari,et al. A Partitioning Strategy for Nonuniform Problems on Multiprocessors , 1987, IEEE Transactions on Computers.
[9] Joel R. Stiles,et al. Monte Carlo simulation of neuro-transmitter release using MCell, a general simulator of cellular physiological processes , 1998 .
[10] D. Gillespie. A rigorous derivation of the chemical master equation , 1992 .
[11] T. Bartol,et al. Miniature endplate current rise times less than 100 microseconds from improved dual recordings can be modeled with passive acetylcholine diffusion from a synaptic vesicle. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[12] R W Hockney,et al. Computer Simulation Using Particles , 1966 .
[13] David M. Nicol,et al. Rectilinear Partitioning of Irregular Data Parallel Computations , 1994, J. Parallel Distributed Comput..
[14] D. Gillespie. Exact Stochastic Simulation of Coupled Chemical Reactions , 1977 .
[15] Michael L. Hines,et al. NEURON — A Program for Simulation of Nerve Equations , 1993 .
[16] Francine Berman,et al. Distributing MCell Simulations on the Grid , 2001, Int. J. High Perform. Comput. Appl..
[17] James M. Bower,et al. The book of GENESIS - exploring realistic neural models with the GEneral NEural SImulation System (2. ed.) , 1994 .
[18] T. Bartol,et al. Monte Carlo Methods for Simulating Realistic Synaptic Microphysiology Using MCell , 2000 .
[19] L M Loew,et al. A general computational framework for modeling cellular structure and function. , 1997, Biophysical journal.
[20] A. Arkin,et al. Simulation of prokaryotic genetic circuits. , 1998, Annual review of biophysics and biomolecular structure.
[21] Laxmikant V. Kalé,et al. NAMD: Biomolecular Simulation on Thousands of Processors , 2002, ACM/IEEE SC 2002 Conference (SC'02).
[22] Bodo Erdmann,et al. An Object-Oriented Adaptive Finite Element Code , 1997 .
[23] Masaru Tomita,et al. E-CELL: software environment for whole-cell simulation , 1999, Bioinform..
[24] J. D. Teresco,et al. Parallel structures and dynamic load balancing for adaptive finite element computation , 1998 .
[25] J. Stiles,et al. The temperature sensitivity of miniature endplate currents is mostly governed by channel gating: evidence from optimized recordings and Monte Carlo simulations. , 1999, Biophysical journal.
[26] Joel R. Stiles,et al. Acetylcholinesterase density and turnover number at frog neuromuscular junctions, with modeling of their role in synaptic function , 1994, Neuron.