Robust discrimination of glioblastomas from metastatic brain tumors on the basis of single‐voxel 1H MRS

This article investigates methods for the accurate and robust differentiation of metastases from glioblastomas on the basis of single‐voxel 1H MRS information. Single‐voxel 1H MR spectra from a total of 109 patients (78 glioblastomas and 31 metastases) from the multicenter, international INTERPRET database, plus a test set of 40 patients (30 glioblastomas and 10 metastases) from three different centers in the Barcelona (Spain) metropolitan area, were analyzed using a robust method for feature (spectral frequency) selection coupled with a linear‐in‐the‐parameters single‐layer perceptron classifier. For the test set, a parsimonious selection of five frequencies yielded an area under the receiver operating characteristic curve of 0.86, and an area under the convex hull of the receiver operating characteristic curve of 0.91. Moreover, these accurate results for the discrimination between glioblastomas and metastases were obtained using a small number of frequencies that are amenable to metabolic interpretation, which should ease their use as diagnostic markers. Importantly, the prediction can be expressed as a simple formula based on a linear combination of these frequencies. As a result, new cases could be straightforwardly predicted by integrating this formula into a computer‐based medical decision support system. This work also shows that the combination of spectra acquired at different TEs (short TE, 20–32 ms; long TE, 135–144 ms) is key to the successful discrimination between glioblastomas and metastases from single‐voxel 1H MRS. Copyright © 2011 John Wiley & Sons, Ltd.

[1]  C. Hartmann,et al.  Hot spots in dynamic (18)FET-PET delineate malignant tumor parts within suspected WHO grade II gliomas. , 2011, Neuro-oncology.

[2]  Margarida Julià-Sapé,et al.  The INTERPRET Decision-Support System version 3.0 for evaluation of Magnetic Resonance Spectroscopy data from human brain tumours and other abnormal brain masses , 2010, BMC Bioinformatics.

[3]  A Heerschap,et al.  Discrimination between Metastasis and Glioblastoma Multiforme Based on Morphometric Analysis of MR Images , 2010, American Journal of Neuroradiology.

[4]  Bettina Kulle,et al.  Proton magnetic resonance spectroscopy in the distinction of high-grade cerebral gliomas from single metastatic brain tumors , 2010, Acta radiologica.

[5]  Franklyn A Howe,et al.  Ex-vivo HRMAS of adult brain tumours: metabolite quantification and assignment of tumour biomarkers , 2010, Molecular Cancer.

[6]  A. Server Response to a letter by Paul E. sijens , 2010, Acta radiologica.

[7]  P. Sijens Response to article “proton magnetic resonance spectroscopy in the distinction of high-grade cerebral gliomas from single metastatic brain tumors” , 2010, Acta radiologica.

[8]  S. Huffel,et al.  Classification of Brain Tumors Based on Magnetic Resonance Spectroscopy (Classificatie van hersentumoren op basis van magnetische resonantie spectroscopie) , 2010 .

[9]  Lluís A. Belanche Muñoz,et al.  Outlier exploration and diagnostic classification of a multi-centre 1H-MRS brain tumour database , 2009, Neurocomputing.

[10]  Sabine Van Huffel,et al.  The effect of combining two echo times in automatic brain tumor classification by MRS , 2008, NMR in biomedicine.

[11]  Sabine Van Huffel,et al.  Multiproject–multicenter evaluation of automatic brain tumor classification by magnetic resonance spectroscopy , 2008, Magnetic Resonance Materials in Physics, Biology and Medicine.

[12]  P. Desmond,et al.  Diffusion Tensor Imaging in Glioblastoma Multiforme and Brain Metastases: The Role of p, q, L, and Fractional Anisotropy , 2008, American Journal of Neuroradiology.

[13]  Josep M. Sopena,et al.  Performing Feature Selection With Multilayer Perceptrons , 2008, IEEE Transactions on Neural Networks.

[14]  S. Van Huffel,et al.  Quantification and classification of high-resolution magic angle spinning data for brain tumor diagnosis , 2007, 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[15]  Yihong Yang,et al.  Simultaneous detection of resolved glutamate, glutamine, and γ-aminobutyric acid at 4 T , 2007 .

[16]  Charles E Metz,et al.  Receiver operating characteristic analysis: a tool for the quantitative evaluation of observer performance and imaging systems. , 2006, Journal of the American College of Radiology : JACR.

[17]  A. W. Simonetti,et al.  Development of a decision support system for diagnosis and grading of brain tumours using in vivo magnetic resonance single voxel spectra , 2006, NMR in biomedicine.

[18]  M. Julià-Sapé,et al.  A Multi-Centre, Web-Accessible and Quality Control-Checked Database of in vivo MR Spectra of Brain Tumour Patients , 2006, Magnetic Resonance Materials in Physics, Biology and Medicine.

[19]  K Tsuchiya,et al.  Differentiation between solitary brain metastasis and high-grade glioma by diffusion tensor imaging. , 2005, The British journal of radiology.

[20]  Ana Paula,et al.  Contribució a la millora del diagnòstic i de la valoració pronòstica de tumors cerebrals humans , 2005 .

[21]  Margarida Julià-Sapé,et al.  Brain tumor classification by proton MR spectroscopy: comparison of diagnostic accuracy at short and long TE. , 2004, AJNR. American journal of neuroradiology.

[22]  J. Suykens,et al.  Classification of brain tumours using short echo time 1H MR spectra. , 2004, Journal of magnetic resonance.

[23]  F. Howe,et al.  Differentiation of metastases from high‐grade gliomas using short echo time 1H spectroscopy , 2004, Journal of magnetic resonance imaging : JMRI.

[24]  Sabine Van Huffel,et al.  Brain tumor classification based on long echo proton MRS signals , 2004, Artif. Intell. Medicine.

[25]  W El-Deredy,et al.  Tumour grading from magnetic resonance spectroscopy: a comparison of feature extraction with variable selection , 2003, Statistics in medicine.

[26]  Carles Arús,et al.  Automated classification of short echo time in in vivo 1H brain tumor spectra: A multicenter study , 2003, Magnetic resonance in medicine.

[27]  Julià Minguillón,et al.  Classifier Combination for In Vivo Magnetic Resonance Spectra of Brain Tumours , 2002, Multiple Classifier Systems.

[28]  Glyn Johnson,et al.  High-grade gliomas and solitary metastases: differentiation by using perfusion and proton spectroscopic MR imaging. , 2002, Radiology.

[29]  C Gössl,et al.  Improved analysis of 1H‐MR spectra in the presence of mobile lipids , 2001, Magnetic resonance in medicine.

[30]  Makoto Ochi,et al.  Differentiation between high-grade glioma and metastatic brain tumor using single-voxel proton MR spectroscopy , 2001, European Radiology.

[31]  D G Altman,et al.  What do we mean by validating a prognostic model? , 2000, Statistics in medicine.

[32]  P J Lisboa,et al.  Assessment of statistical and neural networks methods in NMR spectral classification and metabolite selection , 1998, NMR in biomedicine.

[33]  Kenneth W. Bauer,et al.  Feature saliency measures , 1997 .

[34]  David P. Dobkin,et al.  The quickhull algorithm for convex hulls , 1996, TOMS.

[35]  Bernard Widrow,et al.  30 years of adaptive neural networks: perceptron, Madaline, and backpropagation , 1990, Proc. IEEE.

[36]  W. Paulus,et al.  Intratumoral histologic heterogeneity of gliomas. A quantitative study , 1989, Cancer.

[37]  J. Hanley,et al.  A method of comparing the areas under receiver operating characteristic curves derived from the same cases. , 1983, Radiology.

[38]  J. Hanley,et al.  The meaning and use of the area under a receiver operating characteristic (ROC) curve. , 1982, Radiology.

[39]  J. Swets ROC analysis applied to the evaluation of medical imaging techniques. , 1979, Investigative radiology.

[40]  C. Metz Basic principles of ROC analysis. , 1978, Seminars in nuclear medicine.

[41]  G. Saltzman Patent primitive trigeminal artery studied by cerebral angiography. , 1959, Acta radiologica.

[42]  Aixia Guo,et al.  Gene Selection for Cancer Classification using Support Vector Machines , 2014 .

[43]  Lluís A. Belanche Muñoz,et al.  Feature and model selection with discriminatory visualization for diagnostic classification of brain tumors , 2010, Neurocomputing.

[44]  M. Julià-Sapé,et al.  THE ETUMOUR DATABASE : A TOOL FOR ANNOTATION AND CURATION OF MULTIDIMENSIONAL HUMAN BRAIN TUMOR DATA , 2008 .

[45]  The Influence of , 2008 .

[46]  Yihong Yang,et al.  Simultaneous detection of resolved glutamate, glutamine, and gamma-aminobutyric acid at 4 T. , 2007, Journal of magnetic resonance.

[47]  Z. Wu,et al.  In vivo single-voxel proton MR spectroscopy in the differentiation of high-grade gliomas and solitary metastases. , 2004, Clinical radiology.