Construction and Analysis of the Protein-Protein Interaction Networks Based on Gene Expression Profiles of Parkinson's Disease
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[1] S. Bandyopadhyay,et al. Studying the System-Level Involvement of MicroRNAs in Parkinson's Disease , 2014, PLoS ONE.
[2] Tatiana Foroud,et al. Parkinson Disease Overview , 2014 .
[3] Lian-bo Gao,et al. Gene expression profiling analysis of the putamen for the investigation of compensatory mechanisms in Parkinson’s disease , 2013, BMC Neurology.
[4] R. Williams,et al. Iron deficiency alters expression of dopamine-related genes in the ventral midbrain in mice , 2013, Neuroscience.
[5] Sebastian Munck,et al. β-arrestin 2 regulates Aβ generation and γ-secretase activity in Alzheimer's disease , 2013, Nature Medicine.
[6] A. Hansson,et al. β-Arrestin 2 knockout mice exhibit sensitized dopamine release and increased reward in response to a low dose of alcohol , 2013, Psychopharmacology.
[7] Ling Liu,et al. Construction and analysis of the protein-protein interaction network related to essential hypertension , 2013, BMC Systems Biology.
[8] Avi Ma'ayan,et al. Genes2FANs: connecting genes through functional association networks , 2012, BMC Bioinformatics.
[9] J. Vance,et al. Gene Expression Profiles in Parkinson Disease Prefrontal Cortex Implicate FOXO1 and Genes under Its Transcriptional Regulation , 2012, PLoS genetics.
[10] K. Akagawa,et al. Impairment of Catecholamine Systems during Induction of Long-Term Potentiation at Hippocampal CA1 Synapses in HPC-1/Syntaxin 1A Knock-out Mice , 2012, The Journal of Neuroscience.
[11] Rafael C. Jimenez,et al. The IntAct molecular interaction database in 2012 , 2011, Nucleic Acids Res..
[12] Cheng-Yan Kao,et al. Construction and analysis of the protein-protein interaction networks for schizophrenia, bipolar disorder, and major depression , 2011, BMC Bioinformatics.
[13] E. Hattori,et al. Replication study of Japanese cohorts supports the role of STX1A in autism susceptibility , 2011, Progress in Neuro-Psychopharmacology and Biological Psychiatry.
[14] I. Ferrer,et al. Neuropathology of sporadic Parkinson disease before the appearance of parkinsonism: preclinical Parkinson disease , 2011, Journal of Neural Transmission.
[15] Todd F. DeLuca,et al. Genotator: A disease-agnostic tool for genetic annotation of disease , 2010, BMC Medical Genomics.
[16] J. Foster,et al. Syntaxin 1A regulates dopamine transporter activity, phosphorylation and surface expression , 2010, Neuroscience.
[17] Lisa M. Wiedholz,et al. Does gene deletion of AMPA GluA1 phenocopy features of schizoaffective disorder? , 2010, Neurobiology of Disease.
[18] Joaquín Dopazo,et al. Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling , 2010, Nucleic Acids Res..
[19] I. Ferrer,et al. Involvement of the cerebral cortex in Parkinson disease linked with G2019S LRRK2 mutation without cognitive impairment , 2010, Acta Neuropathologica.
[20] P. Barone,et al. Neurotransmission in Parkinson’s disease: beyond dopamine , 2010, European journal of neurology.
[21] F. Benfenati,et al. Heterogeneity of glutamatergic and GABAergic release machinery in cerebral cortex: analysis of synaptogyrin, vesicle-associated membrane protein, and syntaxin , 2010, Neuroscience.
[22] Susumu Goto,et al. KEGG for representation and analysis of molecular networks involving diseases and drugs , 2009, Nucleic Acids Res..
[23] Hans-Werner Mewes,et al. CORUM: the comprehensive resource of mammalian protein complexes , 2007, Nucleic Acids Res..
[24] Tzu-Chi Chen,et al. Cliques in mitotic spindle network bring kinetochore‐associated complexes to form dependence pathway , 2009, Proteomics.
[25] Bing Qi,et al. Phosphorylation of myristoylated alanine-rich C kinase substrate is involved in the cAMP-dependent amylase release in parotid acinar cells. , 2009, American journal of physiology. Gastrointestinal and liver physiology.
[26] A. Brice,et al. Parkinson's disease: from monogenic forms to genetic susceptibility factors. , 2009, Human molecular genetics.
[27] David Warde-Farley,et al. Dynamic modularity in protein interaction networks predicts breast cancer outcome , 2009, Nature Biotechnology.
[28] Sandhya Rani,et al. Human Protein Reference Database—2009 update , 2008, Nucleic Acids Res..
[29] Tzu-Chi Chen,et al. POINeT: protein interactome with sub-network analysis and hub prioritization , 2009, BMC Bioinformatics.
[30] E. Hattori,et al. Genetic and expression analyses reveal elevated expression of syntaxin 1A ( STX1A) in high functioning autism. , 2008, The international journal of neuropsychopharmacology.
[31] Ozlem Keskin,et al. Topological properties of protein interaction networks from a structural perspective. , 2008, Biochemical Society transactions.
[32] Weixiong Zhang,et al. Variations in the transcriptome of Alzheimer's disease reveal molecular networks involved in cardiovascular diseases , 2008, Genome Biology.
[33] Matthew R. Laird,et al. Protein Protein Interaction Network Evaluation for Identifying Potential Drug Targets , 2009 .
[34] C. Davie. A review of Parkinson's disease. , 2008, British medical bulletin.
[35] Pablo Villoslada,et al. A computational analysis of protein-protein interaction networks in neurodegenerative diseases , 2008, BMC Systems Biology.
[36] Shulan Tian,et al. Induced Pluripotent Stem Cell Lines Derived from Human Somatic Cells , 2007, Science.
[37] Caroline C. Friedel,et al. Influence of degree correlations on network structure and stability in protein-protein interaction networks , 2007, BMC Bioinformatics.
[38] J. Dopazo,et al. FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments , 2007, Nucleic Acids Res..
[39] Mark Gerstein,et al. The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression Dynamics , 2007, PLoS Comput. Biol..
[40] Gabriele Ausiello,et al. MINT: the Molecular INTeraction database , 2006, Nucleic Acids Res..
[41] Mark Gerstein,et al. The tYNA platform for comparative interactomics: a web tool for managing, comparing and mining multiple networks , 2006, Bioinform..
[42] Mike Tyers,et al. Evolutionary and Physiological Importance of Hub Proteins , 2006, PLoS Comput. Biol..
[43] Jianzhi Zhang,et al. Why Do Hubs Tend to Be Essential in Protein Networks? , 2006, PLoS genetics.
[44] Mike Tyers,et al. BioGRID: a general repository for interaction datasets , 2005, Nucleic Acids Res..
[45] Hans-Werner Mewes,et al. MPact: the MIPS protein interaction resource on yeast , 2005, Nucleic Acids Res..
[46] Houeto Jean-Luc. [Parkinson's disease]. , 2022, La Revue du praticien.
[47] L. Moran,et al. Whole genome expression profiling of the medial and lateral substantia nigra in Parkinson’s disease , 2006, Neurogenetics.
[48] S. L. Wong,et al. Towards a proteome-scale map of the human protein–protein interaction network , 2005, Nature.
[49] H. Lehrach,et al. A Human Protein-Protein Interaction Network: A Resource for Annotating the Proteome , 2005, Cell.
[50] S. Coulomb,et al. Gene essentiality and the topology of protein interaction networks , 2005, Proceedings of the Royal Society B: Biological Sciences.
[51] Prahlad T. Ram,et al. Formation of Regulatory Patterns During Signal Propagation in a Mammalian Cellular Network , 2005, Science.
[52] D. Ingber,et al. High-Betweenness Proteins in the Yeast Protein Interaction Network , 2005, Journal of biomedicine & biotechnology.
[53] Shoshana J. Wodak,et al. CYGD: the Comprehensive Yeast Genome Database , 2004, Nucleic Acids Res..
[54] Dmitrij Frishman,et al. MIPS: analysis and annotation of proteins from whole genomes in 2005 , 2005, Nucleic Acids Res..
[55] Rafael A. Irizarry,et al. A Model-Based Background Adjustment for Oligonucleotide Expression Arrays , 2004 .
[56] C. Sander,et al. The HUPO PSI's Molecular Interaction format—a community standard for the representation of protein interaction data , 2004, Nature Biotechnology.
[57] A. Barabasi,et al. Network biology: understanding the cell's functional organization , 2004, Nature Reviews Genetics.
[58] P. Shannon,et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. , 2003, Genome research.
[59] N. Hattori,et al. Parkin Cleaves Intracellular α-Synuclein Inclusions via the Activation of Calpain* , 2003, Journal of Biological Chemistry.
[60] L. Mirny,et al. Protein complexes and functional modules in molecular networks , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[61] Douglas A. Hosack,et al. Identifying biological themes within lists of genes with EASE , 2003, Genome Biology.
[62] N. Hattori,et al. Parkin cleaves intracellular alpha-synuclein inclusions via the activation of calpain. , 2003, The Journal of biological chemistry.
[63] Robert Tibshirani,et al. SAM “Significance Analysis of Microarrays” Users guide and technical document , 2002 .
[64] Isabel Rojas,et al. A graph layout algorithm for drawing metabolic pathways , 2001, Bioinform..
[65] R. Tibshirani,et al. Significance analysis of microarrays applied to the ionizing radiation response , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[66] Ian M. Donaldson,et al. BIND: the Biomolecular Interaction Network Database , 2001, Nucleic Acids Res..
[67] Ioannis Xenarios,et al. DIP: the Database of Interacting Proteins , 2000, Nucleic Acids Res..
[68] Hiroyuki Ogata,et al. KEGG: Kyoto Encyclopedia of Genes and Genomes , 1999, Nucleic Acids Res..
[69] Hong Yang,et al. Regulation of Angiotensin II–induced Neuromodulation by MARCKS in Brain Neurons , 1998, The Journal of cell biology.
[70] P. Greengard,et al. Localization of the MARCKS (87 kDa) protein, a major specific substrate for protein kinase C, in rat brain , 1990, The Journal of neuroscience : the official journal of the Society for Neuroscience.