Peptide conformation in gas phase probed by collision-induced dissociation and its correlation to conformation in condensed phases
暂无分享,去创建一个
[1] Michael A. Freitas,et al. Gas-phase memory of solution-phase protein conformation: H/D exchange and Fourier transform ion cyclotron resonance mass spectrometry of the N-terminal domain of cardiac troponin C , 1999 .
[2] I. Kaltashov. Probing protein dynamics and function under native and mildly denaturing conditions with hydrogen exchange and mass spectrometry , 2005 .
[3] T. Wyttenbach,et al. Gas phase conformations of biological molecules: the hydrogen/deuterium exchange mechanism , 1999 .
[4] A. Drake,et al. Aspects of the molecular structure and dynamics of neuropeptide Y. , 1999, European journal of biochemistry.
[5] D Eisenberg,et al. The structure of melittin. II. Interpretation of the structure. , 1982, The Journal of biological chemistry.
[6] John B. O. Mitchell,et al. The nature of the N H…︁OC hydrogen bond: An intermolecular perturbation theory study of the formamide/formaldehyde complex , 1990 .
[7] N Gibbs,et al. Hydrogen bonding in helical polypeptides from molecular dynamics simulations and amide hydrogen exchange analysis: alamethicin and melittin in methanol. , 1998, Biophysical journal.
[8] P. Schnier,et al. Tandem mass spectrometry of large biomolecule ions by blackbody infrared radiative dissociation. , 1996, Analytical chemistry.
[9] T. Wyttenbach,et al. Conformations of biopolymers in the gas phase: a new mass spectrometric method 2 2 Dedicated to Bob , 2000 .
[10] C Boesch,et al. 1H nuclear-magnetic-resonance studies of the molecular conformation of monomeric glucagon in aqueous solution. , 1978, European journal of biochemistry.
[11] K. Thalassinos,et al. Ion mobility mass spectrometry of proteins in a modified commercial mass spectrometer , 2004 .
[12] Zhongqi Zhang,et al. De novo peptide sequencing based on a divide-and-conquer algorithm and peptide tandem spectrum simulation. , 2004, Analytical chemistry.
[13] D. J. Douglas,et al. Stability of a highly charged noncovalent complex in the gas phase: holomyoglobin. , 1998, Rapid communications in mass spectrometry : RCM.
[14] R. Norton,et al. Solution structure of human neuropeptide Y , 1996, Journal of biomolecular NMR.
[15] I. Campbell,et al. The structure of melittin. A 1H-NMR study in methanol. , 1988, European journal of biochemistry.
[16] W. Lehmann,et al. Five-membered ring formation in unimolecular reactions of peptides: a key structural element controlling low-energy collision-induced dissociation of peptides. , 2000, Journal of mass spectrometry : JMS.
[17] T. Wyttenbach,et al. Design of a new electrospray ion mobility mass spectrometer , 2001 .
[18] D. Eisenberg,et al. The structure of melittin. I. Structure determination and partial refinement. , 1981, The Journal of biological chemistry.
[19] N. C. Price,et al. The application of circular dichroism to studies of protein folding and unfolding. , 1997, Biochimica et biophysica acta.
[20] F. McLafferty,et al. Secondary and tertiary structures of gaseous protein ions characterized by electron capture dissociation mass spectrometry and photofragment spectroscopy , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[21] Francis M. Wampler,et al. Gas-phase folding and unfolding of cytochrome c cations. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[22] J. Scholtz. Calorimetric determination of the enthalpy change for the α-helix to coil transition of an alanine peptide in water , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[23] A M Gronenborn,et al. Two-, three-, and four-dimensional NMR methods for obtaining larger and more precise three-dimensional structures of proteins in solution. , 1991, Annual review of biophysics and biophysical chemistry.
[24] Michael A. Freitas,et al. High-field fourier transform ion cyclotron resonance mass spectrometry for simultaneous trapping and gas-phase hydrogen/deuterium exchange of peptide ions , 1998 .
[25] V. Wysocki,et al. Average activation energies of low-energy fragmentation processes of protonated peptides determined by a new approach. , 1996, Rapid communications in mass spectrometry : RCM.
[26] C. D. Gelatt,et al. Optimization by Simulated Annealing , 1983, Science.
[27] V. Wysocki,et al. Mobile and localized protons: a framework for understanding peptide dissociation. , 2000, Journal of mass spectrometry : JMS.
[28] A. Bax,et al. Two-dimensional NMR and protein structure. , 1989, Annual review of biochemistry.
[29] D. J. Douglas,et al. Collision cross sections for protein ions , 1993, Journal of the American Society for Mass Spectrometry.
[30] D. Clemmer,et al. Dissociation of different conformations of ubiquitin ions , 2002, Journal of the American Society for Mass Spectrometry.
[31] Sándor Suhai,et al. Fragmentation pathways of protonated peptides. , 2005, Mass spectrometry reviews.
[32] K. Wüthrich,et al. High-resolution 1H-NMR studies of monomeric melittin in aqueous solution. , 1980, Biochimica et biophysica acta.
[33] Zhongqi Zhang,et al. Probing the non-covalent structure of proteins by amide hydrogen exchange and mass spectrometry. , 1997, Journal of mass spectrometry : JMS.
[34] K. Wüthrich,et al. High-resolution 1H-NMR studies of self-aggregation of melittin in aqueous solution. , 1980, Biochimica et biophysica acta.
[35] Zhongqi Zhang,et al. Prediction of low-energy collision-induced dissociation spectra of peptides with three or more charges. , 2005, Analytical chemistry.
[36] R. L. Baldwin,et al. Calorimetric determination of the enthalpy change for the alpha-helix to coil transition of an alanine peptide in water. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[37] M. Jarrold,et al. Peptides and proteins in the vapor phase. , 2000, Annual review of physical chemistry.
[38] Zhongqi Zhang,et al. Determination of amide hydrogen exchange by mass spectrometry: A new tool for protein structure elucidation , 1993, Protein science : a publication of the Protein Society.
[39] D. Clemmer,et al. Anhydrous protein ions. , 1999, Chemical reviews.
[40] Zhongqi Zhang. Prediction of low-energy collision-induced dissociation spectra of peptides. , 2004, Analytical chemistry.
[41] C. Fenselau,et al. Stability of secondary structural elements in a solvent‐free environment: the α helix , 1997 .
[42] N. Ben-Tal,et al. Free Energy of Amide Hydrogen Bond Formation in Vacuum, in Water, and in Liquid Alkane Solution , 1997 .
[43] T. Wyttenbach,et al. Gas-Phase Conformations: The Ion Mobility/Ion Chromatography Method , 2003 .
[44] Xueheng Cheng,et al. Characterization of cytochrome c variants with high-resolution FTICR mass spectrometry: correlation of fragmentation and structure. , 1995, Analytical chemistry.
[45] Michael A. Freitas,et al. Gas-phase bovine ubiquitin cation conformations resolved by gas-phase hydrogen/deuterium exchange rate and extent , 1999 .
[46] Francis M. Wampler,et al. Coexisting stable conformations of gaseous protein ions. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[47] A. J. Frank,et al. Kinetic intermediates in the folding of gaseous protein ions characterized by electron capture dissociation mass spectrometry. , 2001, Journal of the American Chemical Society.
[48] K. Wüthrich. Protein structure determination in solution by NMR spectroscopy. , 1990, The Journal of biological chemistry.
[49] D. Barnett,et al. Elongated conformers of charge states +11 to +15 of bovine ubiquitin studied using ESI-FAIMS-MS , 2001, Journal of the American Society for Mass Spectrometry.
[50] H. Kessler,et al. Neuropeptide Y. Optimized solid-phase synthesis and conformational analysis in trifluoroethanol. , 1992, European journal of biochemistry.
[51] R. L. Baldwin,et al. Parameters of helix–coil transition theory for alanine‐based peptides of varying chain lengths in water , 1991, Biopolymers.
[52] P. Kebarle,et al. Collision-Induced Dissociation Threshold Energies of Protonated Glycine, Glycinamide, and Some Related Small Peptides and Peptide Amino Amides , 1997 .
[53] D. Barnett,et al. Separation of protein conformers using electrospray-high field asymmetric waveform ion mobility spectrometry-mass spectrometry , 2000 .
[54] G A Petsko,et al. Fluctuations in protein structure from X-ray diffraction. , 1984, Annual review of biophysics and bioengineering.
[55] J. R. Engen,et al. Investigating protein structure and dynamics by hydrogen exchange MS. , 2001, Analytical chemistry.
[56] C. Cassady,et al. Elucidation of isomeric structures for ubiquitin [M + 12H]12+ ions produced by electrospray ionization mass spectrometry. , 1996, Journal of mass spectrometry : JMS.
[57] A. E. Counterman,et al. Large anhydrous polyalanine ions: evidence for extended helices and onset of a more compact state. , 2001, Journal of the American Chemical Society.
[58] E. Bradbury,et al. A conformational study of glucagon. , 1968, European journal of biochemistry.
[59] R. Li,et al. The hydrogen exchange core and protein folding , 1999, Protein science : a publication of the Protein Society.
[60] F. McLafferty,et al. Detailed unfolding and folding of gaseous ubiquitin ions characterized by electron capture dissociation. , 2002, Journal of the American Chemical Society.
[61] S W Englander,et al. Protein folding intermediates and pathways studied by hydrogen exchange. , 2000, Annual review of biophysics and biomolecular structure.
[62] Vicki H. Wysocki,et al. Influence of Peptide Composition, Gas-Phase Basicity, and Chemical Modification on Fragmentation Efficiency: Evidence for the Mobile Proton Model , 1996 .
[63] Ian J. Tickle,et al. X-ray analysis of glucagon and its relationship to receptor binding , 1975, Nature.
[64] I. Campbell,et al. The dynamic properties of melittin in solution , 2004, European Biophysics Journal.