Complexes of HXeY with HX (Y, X = F, Cl, Br, I): Symmetry-Adapted Perturbation Theory Study and Anharmonic Vibrational Analysis

A comprehensive analysis of the intermolecular interaction energy and anharmonic vibrations of 41 structures of the HXeY⋯HX (X, Y = F, Cl, Br, I) family of noble-gas-compound complexes for all possible combinations of Y and X was conducted. New structures were identified, and their interaction energies were studied by means of symmetry-adapted perturbation theory, up to second-order corrections: this provided insight into the physical nature of the interaction in the complexes. The energy components were discussed, in connection to anharmonic frequency analysis. The results show that the induction and dispersion corrections were the main driving forces of the interaction, and that their relative contributions correlated with the complexation effects seen in the vibrational stretching modes of Xe–H and H–X. Reasonably clear patterns of interaction were found for different structures. Our findings corroborate previous findings with better methods, and provide new data. These results suggest that the entire group of the studied complexes can be labelled as “naturally blueshifting”, except for the complexes with HI.

[1]  F. Grandinetti 60 years of chemistry of the noble gases , 2022, Nature.

[2]  J. Sadlej,et al.  Towards Quantum-Chemical Modeling of the Activity of Anesthetic Compounds , 2021, International journal of molecular sciences.

[3]  Jeff Reback,et al.  pandas-dev/pandas: Pandas 1.3.0 , 2021 .

[4]  Yanming Ma,et al.  Xenon iron oxides predicted as potential Xe hosts in Earth’s lower mantle , 2020, Nature Communications.

[5]  Chuanzhi Sun,et al.  Charge-Shift Bonding in Xenon Hydrides: An NBO/NRT Investigation on HXeY···HX (Y = Cl, Br, I; X = OH, Cl, Br, I, CCH, CN) via H-Xe Blue-Shift Phenomena , 2020, Frontiers in Chemistry.

[6]  Guntram Rauhut,et al.  The Molpro quantum chemistry package. , 2020, The Journal of chemical physics.

[7]  M. Räsänen,et al.  Thermal decomposition of the HXeCl···H2O complex in solid xenon: Experimental characterization of the two-body decomposition channel , 2019, Chemical Physics Letters.

[8]  Benjamin P Pritchard,et al.  New Basis Set Exchange: An Open, Up-to-Date Resource for the Molecular Sciences Community , 2019, J. Chem. Inf. Model..

[9]  J. Jankowska,et al.  Computational Structures and SAPT Interaction Energies of HXeSH···H2Y (Y=O or S) Complexes , 2018, Inorganics.

[10]  R. Saykally,et al.  The water dimer II: Theoretical investigations , 2018 .

[11]  H. Bureau,et al.  Bonding of xenon to oxygen in magmas at depth , 2018 .

[12]  M. Räsänen,et al.  Experimental and theoretical study of the HXeI⋯HCl and HXeI⋯HCCH complexes. , 2015, The Journal of chemical physics.

[13]  M. Räsänen,et al.  Toward molecular mechanism of xenon anesthesia: a link to studies of xenon complexes with small aromatic molecules. , 2015, The journal of physical chemistry. A.

[14]  A. Mohajeri,et al.  Investigating the nature of intermolecular and intramolecular bonds in noble gas containing molecules , 2015 .

[15]  Chelen H. Johnson,et al.  INVESTIGATING THE MINIMUM ENERGY PRINCIPLE IN SEARCHES FOR NEW MOLECULAR SPECIES—THE CASE OF H2C3O ISOMERS , 2014, 1410.8528.

[16]  E. Makarewicz,et al.  Effects of xenon insertion into hydrogen bromide. Comparison of the electronic structure of the HBr···CO2 and HXeBr···CO2 complexes using quantum chemical topology methods: electron localization function, atoms in molecules and symmetry adapted perturbation theory. , 2014, The journal of physical chemistry. A.

[17]  M. Räsänen,et al.  Matrix-isolation and computational study of the HXeY⋯H2O complexes (Y = Cl, Br, and I). , 2014, The Journal of chemical physics.

[18]  O. Krause,et al.  Detection of a Noble Gas Molecular Ion, 36ArH+, in the Crab Nebula , 2013, Science.

[19]  M. Räsänen,et al.  Experimental and computational study of the HXeI···HY complexes (Y = Br and I). , 2013, The Journal of chemical physics.

[20]  Joseph R. Lane CCSDTQ Optimized Geometry of Water Dimer. , 2013, Journal of chemical theory and computation.

[21]  Z. Mielke,et al.  Matrix effects on hydrogen-bonded complexes trapped in low-temperature matrices , 2012 .

[22]  M. Räsänen,et al.  Intrinsic lifetimes and kinetic stability in media of noble-gas hydrides , 2012 .

[23]  Li Sheng,et al.  Ab initio study of HXeF dimer and trimer , 2012 .

[24]  J. Jankowska,et al.  Spectroscopic parameters in noble gas molecule: HXeF and its complex with HF , 2011 .

[25]  J. Sadlej,et al.  Theoretical predictions of the spectroscopic parameters in noble-gas molecules: HXeOH and its complex with water. , 2011, Physical chemistry chemical physics : PCCP.

[26]  F. Lipparini,et al.  A fully automated implementation of VPT2 Infrared intensities , 2010 .

[27]  R. Benny Gerber,et al.  Lifetimes of compounds made of noble-gas atoms with water , 2009 .

[28]  Markku Räsänen,et al.  Noble-gas hydrides: new chemistry at low temperatures. , 2009, Accounts of chemical research.

[29]  L. Khriachtchev,et al.  Intermolecular interactions involving noble-gas hydrides: Where the blue shift of vibrational frequency is a normal effect , 2008 .

[30]  M. Räsänen,et al.  Experimental and computational study of HXeY...HX complexes (X, Y = Cl and Br): an example of exceptionally large complexation effect. , 2008, The journal of physical chemistry. A.

[31]  W. Grochala Atypical compounds of gases, which have been called 'noble'. , 2007, Chemical Society reviews.

[32]  Brian E. Granger,et al.  IPython: A System for Interactive Scientific Computing , 2007, Computing in Science & Engineering.

[33]  John D. Hunter,et al.  Matplotlib: A 2D Graphics Environment , 2007, Computing in Science & Engineering.

[34]  B. Shepler,et al.  On the spectroscopic and thermochemical properties of ClO, BrO, IO, and their anions. , 2006, The journal of physical chemistry. A.

[35]  A. Jambon,et al.  Retention of Xenon in Quartz and Earth's Missing Xenon , 2005, Science.

[36]  R. Gerber Formation of novel rare-gas molecules in low-temperature matrices. , 2004, Annual review of physical chemistry.

[37]  Wei-Ping Hu,et al.  Strong hydrogen bonding between neutral noble-gas molecules (HNgF, Ng=Ar, Kr, and Xe) and hydrogen fluoride: a theoretical study , 2004 .

[38]  H. Stoll,et al.  Systematically convergent basis sets with relativistic pseudopotentials. II. Small-core pseudopotentials and correlation consistent basis sets for the post-d group 16–18 elements , 2003 .

[39]  M. Maze,et al.  Xenon: no stranger to anaesthesia. , 2003, British journal of anaesthesia.

[40]  M. Pettersson,et al.  Intermolecular complexes of HXeOH with water: stabilization and destabilization effects. , 2002, Journal of the American Chemical Society.

[41]  M. Pettersson,et al.  A theoretical study of HArF, a newly observed neutral argon compound , 2001 .

[42]  G. Chaban,et al.  Combined ab initio and anharmonic vibrational spectroscopy calculations for rare gas containing fluorohydrides, HRgF , 2000 .

[43]  G. Chaban,et al.  Anharmonic Vibrational Spectroscopy Calculations for Novel Rare-Gas-Containing Compounds: HXeH, HXeCl, HXeBr, and HXeOH , 2000 .

[44]  Jan Lundell,et al.  A stable argon compound , 2000, Nature.

[45]  Jan Lundell,et al.  Computer Experiments on Xenon-containing Molecules , 2000, Comput. Chem..

[46]  Neil Bartlett,et al.  Concerning the nature of XePtF6 , 2000 .

[47]  Mika Pettersson,et al.  A Chemical Compound Formed from Water and Xenon: HXeOH , 1999 .

[48]  M. Pettersson,et al.  New Rare-Gas-Containing Neutral Molecules , 1999 .

[49]  M. Pettersson,et al.  HXeSH, the First Example of a Xenon—Sulfur Bond. , 1998 .

[50]  Jan Lundell,et al.  HXeSH, the First Example of a Xenon-Sulfur Bond , 1998 .

[51]  Miquel Duran,et al.  How does basis set superposition error change the potential surfaces for hydrogen-bonded dimers? , 1996 .

[52]  N. Runeberg,et al.  Calculated properties of XeH2 , 1995 .

[53]  M. Pettersson,et al.  Neutral rare-gas containing charge-transfer molecules in solid matrices. I. HXeCl, HXeBr, HXeI, and HKrCl in Kr and Xe , 1995 .

[54]  Robert Moszynski,et al.  Perturbation Theory Approach to Intermolecular Potential Energy Surfaces of van der Waals Complexes , 1994 .

[55]  Angela K. Wilson,et al.  Gaussian basis sets for use in correlated molecular calculations. IX. The atoms gallium through krypton , 1993 .

[56]  T. Dunning,et al.  Electron affinities of the first‐row atoms revisited. Systematic basis sets and wave functions , 1992 .

[57]  T. H. Dunning Gaussian basis sets for use in correlated molecular calculations. I. The atoms boron through neon and hydrogen , 1989 .

[58]  S. F. Boys,et al.  The calculation of small molecular interactions by the differences of separate total energies. Some procedures with reduced errors , 1970 .

[59]  J. Sadlej,et al.  The influence of the dispersion corrections on the performance of DFT method in modeling HNgY noble gas molecules and their complexes , 2018 .

[60]  et al.,et al.  Jupyter Notebooks - a publishing format for reproducible computational workflows , 2016, ELPUB.

[61]  G. Cavallo,et al.  Halogen Bonding in Hypervalent Iodine Compounds. , 2016, Topics in current chemistry.

[62]  Wes McKinney,et al.  Data Structures for Statistical Computing in Python , 2010, SciPy.

[63]  G. Scuseria,et al.  Gaussian 03, Revision E.01. , 2007 .

[64]  Vincenzo Barone,et al.  Anharmonic vibrational properties by a fully automated second-order perturbative approach. , 2005, The Journal of chemical physics.

[65]  M. Maze,et al.  Xenon: elemental anaesthesia in clinical practice. , 2004, British medical bulletin.

[66]  T. Wirth Hypervalent Iodine Chemistry , 2003 .

[67]  David,et al.  Gaussian basis sets for use in correlated molecular calculations . Ill . The atoms aluminum through argon , 1999 .

[68]  W. Kossel Über Molekülbildung als Frage des Atombaus , 1916 .