Self-feeding MUSE: A robust method for high resolution diffusion imaging using interleaved EPI

Single-shot echo planar imaging (EPI) with parallel imaging techniques has been well established as the most popular method for clinical diffusion imaging, due to its fast acquisition and motion insensitivity. However, this approach is limited by the relatively low spatial resolution and image distortion. Interleaved EPI is able to break the limitations but the phase variations among different shots must be considered for artifact suppression. The introduction of multiplexed sensitivity-encoding (MUSE) can address the phase issue using sensitivity encoding (SENSE) for self-navigation of each interleave. However, MUSE has suboptimal results when the number of shots is high. To achieve higher spatial resolution and lower geometric distortion, we introduce two new schemes into the MUSE framework: 1) a self-feeding mechanism is adopted by using prior information regularized SENSE in order to obtain reliable phase estimation; and 2) retrospective motion detection and data rejection strategies are performed to exclude unusable data corrupted by severe pulsatile motions. The proposed method is named self-feeding MUSE (SF-MUSE). Experiments on healthy volunteers demonstrate that this new SF-MUSE approach provides more accurate motion-induced phase estimation and fewer artifacts caused by data corruption when compared with the original MUSE method. SF-MUSE is a robust method for high resolution diffusion imaging and suitable for practical applications with reasonable scan time.

[1]  P. Boesiger,et al.  SENSE‐DTI at 3 T , 2004, Magnetic resonance in medicine.

[2]  P. Grenier,et al.  MR imaging of intravoxel incoherent motions: application to diffusion and perfusion in neurologic disorders. , 1986, Radiology.

[3]  P. Boesiger,et al.  SENSE: Sensitivity encoding for fast MRI , 1999, Magnetic resonance in medicine.

[4]  S. Skare,et al.  Robust GRAPPA‐accelerated diffusion‐weighted readout‐segmented (RS)‐EPI , 2009, Magnetic resonance in medicine.

[5]  S. Skare,et al.  Readout-segmented EPI for rapid high resolution diffusion imaging at 3 T. , 2008, European journal of radiology.

[6]  Tipu Z. Aziz,et al.  Diffusion imaging of whole, post-mortem human brains on a clinical MRI scanner , 2011, NeuroImage.

[7]  Derek K. Jones,et al.  RESTORE: Robust estimation of tensors by outlier rejection , 2005, Magnetic resonance in medicine.

[8]  Wei Lin,et al.  A rapid and robust numerical algorithm for sensitivity encoding with sparsity constraints: Self‐feeding sparse SENSE , 2010, Magnetic resonance in medicine.

[9]  Robin M Heidemann,et al.  Generalized autocalibrating partially parallel acquisitions (GRAPPA) , 2002, Magnetic resonance in medicine.

[10]  Robin M. Heidemann,et al.  Multi-shot, diffusion-weighted imaging at 3T using readout-segmented EPI and GRAPPA , 2006 .

[11]  Allen W. Song,et al.  A robust multi-shot scan strategy for high-resolution diffusion weighted MRI enabled by multiplexed sensitivity-encoding (MUSE) , 2013, NeuroImage.

[12]  J C Gore,et al.  Analysis and correction of motion artifacts in diffusion weighted imaging , 1994, Magnetic resonance in medicine.

[13]  R. Stollberger,et al.  Improved diffusion‐weighted single‐shot echo‐planar imaging (EPI) in stroke using sensitivity encoding (SENSE) , 2001, Magnetic resonance in medicine.

[14]  D. A. Porter 2 D-Navigator-Based ReAcquisition for Motion Artefact Suppression in Multi-Shot , Diffusion-Weighted Imaging , 2005 .

[15]  Nan-Kuei Chen,et al.  High-resolution diffusion weighted MRI enabled by multiplexed sensitivity-encoding using projection on convex set ( POCSMUSE ) , 2013 .

[16]  Roland Bammer,et al.  Diffusion tensor imaging using single‐shot SENSE‐EPI , 2002, Magnetic resonance in medicine.

[17]  A. D. de Crespigny,et al.  Navigated Diffusion Imaging of Normal and Ischemic Human Brain , 1995, Magnetic resonance in medicine.

[18]  Jens Frahm,et al.  Magnetic Resonance in Medicine at 30 , 2014, Magnetic resonance in medicine.

[19]  John C Gore,et al.  High‐resolution human diffusion tensor imaging using 2‐D navigated multishot SENSE EPI at 7 T , 2013, Magnetic resonance in medicine.

[20]  Hua Guo,et al.  POCS-ICE : POCS based Inherent Correction of phase Errors for multi-shot spiral DWI , 2013 .

[21]  Rafael C. González,et al.  Digital image processing using MATLAB , 2006 .

[22]  S. Skare,et al.  On the effects of gating in diffusion imaging of the brain using single shot EPI. , 2001, Magnetic resonance imaging.

[23]  K. Kwong,et al.  Parallel imaging reconstruction using automatic regularization , 2004, Magnetic resonance in medicine.

[24]  A. Song,et al.  Cortical Depth Dependence of the Diffusion Anisotropy in the Human Cortical Gray Matter In Vivo , 2014, PloS one.

[25]  R. Ordidge,et al.  Correction of motional artifacts in diffusion-weighted MR images using navigator echoes. , 1994, Magnetic resonance imaging.

[26]  Trong-Kha Truong,et al.  High‐resolution multishot spiral diffusion tensor imaging with inherent correction of motion‐induced phase errors , 2014, Magnetic resonance in medicine.

[27]  J. Pauly,et al.  Isotropic diffusion‐weighted and spiral‐navigated interleaved EPI for routine imaging of acute stroke , 1997, Magnetic resonance in medicine.

[28]  P Wach,et al.  Diffusion-weighted imaging with navigated interleaved echo-planar imaging and a conventional gradient system. , 1999, Radiology.

[29]  Stefan Skare,et al.  Clinical multishot DW‐EPI through parallel imaging with considerations of susceptibility, motion, and noise , 2007, Magnetic resonance in medicine.

[30]  M. Moseley,et al.  Self‐navigated interleaved spiral (SNAILS): Application to high‐resolution diffusion tensor imaging , 2004, Magnetic resonance in medicine.

[31]  Robin M Heidemann,et al.  High resolution diffusion‐weighted imaging using readout‐segmented echo‐planar imaging, parallel imaging and a two‐dimensional navigator‐based reacquisition , 2009, Magnetic resonance in medicine.

[32]  Karla L Miller,et al.  Nonlinear phase correction for navigated diffusion imaging , 2003, Magnetic resonance in medicine.

[33]  J. Pauly,et al.  Diffusion‐weighted interleaved echo‐planar imaging with a pair of orthogonal navigator echoes , 1996, Magnetic resonance in medicine.

[34]  James G Pipe,et al.  Multishot diffusion‐weighted FSE using PROPELLER MRI , 2002, Magnetic resonance in medicine.

[35]  S J Riederer,et al.  Interleaved echo planar imaging on a standard MRI system , 1994, Magnetic resonance in medicine.

[36]  Hangyi Jiang,et al.  DtiStudio: Resource program for diffusion tensor computation and fiber bundle tracking , 2006, Comput. Methods Programs Biomed..

[37]  P. Basser,et al.  MR diffusion tensor spectroscopy and imaging. , 1994, Biophysical journal.