Water nanodroplets: predictions of five model potentials.
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[1] Pengyu Y. Ren,et al. Temperature and Pressure Dependence of the AMOEBA Water Model , 2004 .
[2] S. Grimme,et al. A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu. , 2010, The Journal of chemical physics.
[3] L. Ojamäe,et al. Computational studies of the stability of the (H2O)100 nanodrop , 2010 .
[4] Gregory S. Tschumper,et al. Efficient and Accurate Methods for the Geometry Optimization of Water Clusters: Application of Analytic Gradients for the Two-Body:Many-Body QM:QM Fragmentation Method to (H2O)n, n = 3-10. , 2011, Journal of chemical theory and computation.
[5] C. Vega,et al. A general purpose model for the condensed phases of water: TIP4P/2005. , 2005, The Journal of chemical physics.
[6] Krzysztof Szalewicz,et al. Predictions of the Properties of Water from First Principles , 2007, Science.
[7] S. Bulusu,et al. Lowest-energy structures of water clusters (H2O)11 and (H2O)13. , 2006, The journal of physical chemistry. A.
[8] J. Bowman,et al. The water hexamer: cage, prism, or both. Full dimensional quantum simulations say both. , 2012, Journal of the American Chemical Society.
[9] P. Kiss,et al. Clusters of classical water models. , 2009, The Journal of chemical physics.
[10] F. Manby,et al. Assessing the accuracy of quantum Monte Carlo and density functional theory for energetics of small water clusters. , 2012, The Journal of chemical physics.
[11] U. Buck,et al. Solid water clusters in the size range of tens–thousands of H2O: a combined computational/spectroscopic outlook , 2004 .
[12] M. Karplus,et al. The topology of multidimensional potential energy surfaces: Theory and application to peptide structure and kinetics , 1997 .
[13] H. Scheraga,et al. Monte Carlo-minimization approach to the multiple-minima problem in protein folding. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[14] Pengyu Y. Ren,et al. Polarizable Atomic Multipole Water Model for Molecular Mechanics Simulation , 2003 .
[15] S. Goedecker. Minima hopping: an efficient search method for the global minimum of the potential energy surface of complex molecular systems. , 2004, The Journal of chemical physics.
[16] Frank Weinhold,et al. Quantum cluster equilibrium theory of liquids: Illustrative application to water , 1998 .
[17] A. Fujii,et al. Spectral signatures of four-coordinated sites in water clusters: infrared spectroscopy of phenol-(H2O)n (∼20 ≤ n ≤ ∼50). , 2011, The journal of physical chemistry. A.
[18] Pradipta Bandyopadhyay,et al. Monte Carlo temperature basin paving with effective fragment potential: an efficient and fast method for finding low-energy structures of water clusters (H2O)20 and (H2O)25. , 2011, The journal of physical chemistry. A.
[19] Hiroshi Takeuchi. Development of an Efficient Geometry Optimization Method for Water Clusters , 2008, J. Chem. Inf. Model..
[20] W. Klyne,et al. Description of steric relationships across single bonds , 1960, Experientia.
[21] P. Slavíček,et al. A Fully Size-Resolved Perspective on the Crystallization of Water Clusters , 2012, Science.
[22] V. Buch,et al. Search for Low Energy Structures of Water Clusters (H2O)n, n = 20−22, 48, 123, and 293 , 2003 .
[23] David J. Wales,et al. Global minima for water clusters (H2O)n, n ⩽ 21, described by a five-site empirical potential , 2005 .
[24] Sotiris S Xantheas,et al. The flexible, polarizable, thole-type interaction potential for water (TTM2-F) revisited. , 2006, The journal of physical chemistry. A.
[25] Melissa K. Gish,et al. Fast nuclear spin conversion in water clusters and ices: a matrix isolation study. , 2011, The journal of physical chemistry. A.
[26] H. Scheraga,et al. Global optimization of clusters, crystals, and biomolecules. , 1999, Science.
[27] Wencai Lu,et al. Energetic and fragmentation stability of water clusters (H2O)n, n = 2–30 , 2011 .
[28] R. Hentschke,et al. Global Minima of Water Clusters (H2O)N, N ≤ 25, Described by Three Empirical Potentials , 2003 .
[29] L. Ojamäe,et al. A theoretical study of water equilibria: the cluster distribution versus temperature and pressure for (H2O)n, n = 1-60, and ice. , 2009, The Journal of chemical physics.
[30] L. Pettersson,et al. Perspective on the structure of liquid water , 2011, CP 2011.
[31] Michael W. Mahoney,et al. A five-site model for liquid water and the reproduction of the density anomaly by rigid, nonpolarizable potential functions , 2000 .
[32] Kenneth D. Jordan,et al. Theoretical study of small water clusters : low-energy fused cubic structures for (H2O)n, n = 8, 12, 16, and 20 , 1993 .
[33] Pedro J. Ballester,et al. Ultrafast shape recognition for similarity search in molecular databases , 2007, Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences.
[34] Edoardo Aprà,et al. High-level ab initio calculations for the four low-lying families of minima of (H2O)20. I. Estimates of MP2/CBS binding energies and comparison with empirical potentials. , 2004, The Journal of chemical physics.
[35] Sherwin J. Singer,et al. Graph Theoretical Generation and Analysis of Hydrogen-Bonded Structures with Applications to the Neutral and Protonated Water Cube and Dodecahedral Clusters , 1998 .
[36] J. Prell,et al. Structures of thermal, mass-selected water clusters probed with hydrophobic ion tags and infrared photodissociation spectroscopy. , 2009, Journal of the American Chemical Society.
[37] Greg L. Hura,et al. Development of an improved four-site water model for biomolecular simulations: TIP4P-Ew. , 2004, The Journal of chemical physics.
[38] Mark S Gordon,et al. The fragment molecular orbital and systematic molecular fragmentation methods applied to water clusters. , 2012, Physical chemistry chemical physics : PCCP.
[39] Shuhua Li,et al. Low-lying structures and stabilities of large water clusters: investigation based on the combination of the AMOEBA potential and generalized energy-based fragmentation approach. , 2010, The journal of physical chemistry. A.
[40] F. Keutsch,et al. The water trimer. , 2003, Chemical reviews.
[41] Bernd Hartke,et al. Global Geometry Optimization of Molecular Clusters: TIP4P Water , 2000 .
[42] D. Anick. Polyhedral water clusters, II: correlations of connectivity parameters with electronic energy and hydrogen bond lengths , 2002 .
[43] Sotiris S. Xantheas,et al. Development of transferable interaction models for water. IV. A flexible, all-atom polarizable potential (TTM2-F) based on geometry dependent charges derived from an ab initio monomer dipole moment surface , 2002 .
[44] Edoardo Aprà,et al. High-Level Ab Initio Electronic Structure Calculations of Water Clusters (H2O)16 and (H2O)17: A New Global Minimum for (H2O)16 , 2010 .
[45] David J. Wales,et al. Global minima of water clusters (H2O)n, n≤21, described by an empirical potential , 1998 .
[46] J. D. Bernal,et al. A Theory of Water and Ionic Solution, with Particular Reference to Hydrogen and Hydroxyl Ions , 1933 .
[47] Brooks H. Pate,et al. Structures of Cage, Prism, and Book Isomers of Water Hexamer from Broadband Rotational Spectroscopy , 2012, Science.
[48] B. Thole. Molecular polarizabilities calculated with a modified dipole interaction , 1981 .
[49] Harold Soh,et al. Discovering Unique, Low-Energy Pure Water Isomers: Memetic Exploration, Optimization, and Landscape Analysis , 2010, IEEE Transactions on Evolutionary Computation.
[50] Berhane Temelso,et al. Benchmark structures and binding energies of small water clusters with anharmonicity corrections. , 2011, The journal of physical chemistry. A.
[51] Small clusters of formic acid: Tests and applications of density functional theory with dispersion-correcting potentials , 2013 .
[52] S. Kazachenko,et al. Are there any magic numbers for water nanodroplets, (H2O) n , in the range 36 ≤ n ≤ 50? , 2010 .
[53] Bernd Hartke,et al. Larger water clusters with edges and corners on their way to ice: structural trends elucidated with an improved parallel evolutionary algorithm. , 2006, The journal of physical chemistry. A.
[54] Sotiris S Xantheas,et al. Development of transferable interaction potentials for water. V. Extension of the flexible, polarizable, Thole-type model potential (TTM3-F, v. 3.0) to describe the vibrational spectra of water clusters and liquid water. , 2008, The Journal of chemical physics.
[55] Wojciech Cencek,et al. Interaction energies of large clusters from many-body expansion. , 2011, The Journal of chemical physics.
[57] Ajit J. Thakkar,et al. Improved minima-hopping. TIP4P water clusters, (H2O)n with n⩽37 , 2009 .
[58] Kenneth D Jordan,et al. Theoretical characterization of the (H2O)21 cluster: application of an n-body decomposition procedure. , 2006, The journal of physical chemistry. B.
[59] Mark A. Miller,et al. Archetypal energy landscapes , 1998, Nature.
[60] Harry Partridge,et al. The determination of an accurate isotope dependent potential energy surface for water from extensive ab initio calculations and experimental data , 1997 .
[61] W. L. Jorgensen,et al. Comparison of simple potential functions for simulating liquid water , 1983 .
[62] Edmanuel Torres,et al. A (Nearly) Universally Applicable Method for Modeling Noncovalent Interactions Using B3LYP. , 2012, The journal of physical chemistry letters.
[63] P. Uvdal,et al. Water tetramer, pentamer, and hexamer in inert matrices. , 2012, The journal of physical chemistry. A.
[64] Oleksandr Loboda,et al. Theoretical study on icosahedral water clusters , 2010 .
[65] Margaret E. Johnson,et al. Current status of the AMOEBA polarizable force field. , 2010, The journal of physical chemistry. B.
[66] Pengyu Y. Ren,et al. Polarizable Atomic Multipole-based Molecular Mechanics for Organic Molecules. , 2011, Journal of chemical theory and computation.
[67] R. Ludwig. The importance of tetrahedrally coordinated molecules for the explanation of liquid water properties. , 2007, Chemphyschem : a European journal of chemical physics and physical chemistry.
[68] H. Kabrede,et al. Using vibrational modes in the search for global minima of atomic and molecular clusters , 2006 .
[69] M. Chaplin,et al. A proposal for the structuring of water. , 2000, Biophysical chemistry.
[70] Albeiro Restrepo,et al. Structural studies of the water pentamer , 2011 .
[71] Stability of the cubic water octamer , 2003 .
[72] S. Xantheas,et al. The spectroscopic signature of the "all-surface" to "internally solvated" structural transition in water clusters in the n = 17-21 size regime. , 2005, The Journal of chemical physics.