Microbial Nanotechnology: Challenges and Prospects for Green Biocatalytic Synthesis of Nanoscale Materials for Sensoristic and Biomedical Applications

Nanomaterials are increasingly being used in new products and devices with a great impact on different fields from sensoristics to biomedicine. Biosynthesis of nanomaterials by microorganisms is recently attracting interest as a new, exciting approach towards the development of ‘greener’ nanomanufacturing compared to traditional chemical and physical approaches. This review provides an insight about microbial biosynthesis of nanomaterials by bacteria, yeast, molds, and microalgae for the manufacturing of sensoristic devices and therapeutic/diagnostic applications. The last ten-year literature was selected, focusing on scientific works where aspects like biosynthesis features, characterization, and applications have been described. The knowledge, challenges, and potentiality of microbial-mediated biosynthesis was also described. Bacteria and microalgae are the main microorganism used for nanobiosynthesis, principally for biomedical applications. Some bacteria and microalgae have showed the ability to synthetize unique nanostructures: bacterial nanocellulose, exopolysaccharides, bacterial nanowires, and biomineralized nanoscale materials (magnetosomes, frustules, and coccoliths). Yeasts and molds are characterized by extracellular synthesis, advantageous for possible reuse of cell cultures and reduced purification processes of nanomaterials. The intrinsic variability of the microbiological systems requires a greater protocols standardization to obtain nanomaterials with increasingly uniform and reproducible chemical-physical characteristics. A deeper knowledge about biosynthetic pathways and the opportunities from genetic engineering are stimulating the research towards a breakthrough development of microbial-based nanosynthesis for the future scaling-up and possible industrial exploitation of these promising ‘nanofactories’.

[1]  A. Yasmin,et al.  Microbes: Nature’s Cell Factories of Nanoparticles Synthesis , 2018 .

[2]  Rui Wei,et al.  Biosynthesis of Au–Ag Alloy Nanoparticles for Sensitive Electrochemical Determination of Paracetamol , 2017 .

[3]  C. Yeh,et al.  Nanoparticle biosynthesis using unicellular and subcellular supports , 2015 .

[4]  Thomas L. Theis,et al.  Toward Sustainable Nanoproducts , 2008 .

[5]  Ashutosh Kumar,et al.  Intracellular synthesis of gold nanoparticles using alga Tetraselmis kochinensis , 2012 .

[6]  Chuanbin Mao,et al.  Biosynthesis and characterization of CdS quantum dots in genetically engineered Escherichia coli. , 2011, Journal of biotechnology.

[7]  Le Zhen,et al.  Photoluminescence detection of 2,4,6-trinitrotoluene (TNT) binding on diatom frustule biosilica functionalized with an anti-TNT monoclonal antibody fragment. , 2016, Biosensors & bioelectronics.

[8]  Qing-Ying Luo,et al.  Nanomechanical analysis of yeast cells in CdSe quantum dot biosynthesis. , 2014, Small.

[9]  K. Narayanan,et al.  Biological synthesis of metal nanoparticles by microbes. , 2010, Advances in colloid and interface science.

[10]  A. Torriero,et al.  Inquisition of Microcystis aeruginosa and Synechocystis nanowires: characterization and modelling , 2015, Antonie van Leeuwenhoek.

[11]  Wei Wang,et al.  Silver nanocrystallites: biofabrication using Shewanella oneidensis, and an evaluation of their comparative toxicity on gram-negative and gram-positive bacteria. , 2010, Environmental science & technology.

[12]  M. Sprynskyy,et al.  Ultrasensitive SERS immunoassay based on diatom biosilica for detection of interleukins in blood plasma , 2017, Analytical and Bioanalytical Chemistry.

[13]  N. Voelcker,et al.  Targeted drug delivery using genetically engineered diatom biosilica , 2015, Nature Communications.

[14]  Qiangfei Xia,et al.  Synthetic Biological Protein Nanowires with High Conductivity. , 2016, Small.

[15]  Absar Ahmad,et al.  Biological synthesis of silver nanoparticles using the fungus Humicola sp. and evaluation of their cytoxicity using normal and cancer cell lines. , 2013, Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy.

[16]  T. Dutta,et al.  Diatom Biogenic Silica as a Felicitous Platform for Biochemical Engineering: Expanding Frontiers. , 2019, ACS applied bio materials.

[17]  M. Mondaca,et al.  Biosynthesis of selenium nanoparticles by Pantoea agglomerans and their antioxidant activity , 2012, Journal of Nanoparticle Research.

[18]  J. Erez,et al.  Bionic synthesis of a magnetic calcite skeletal structure through living foraminifera , 2019, Materials Horizons.

[19]  J. Gescher,et al.  Extracellular Electron Transfer and Biosensors. , 2019, Advances in biochemical engineering/biotechnology.

[20]  B. Mishra,et al.  Pigment mediated biogenic synthesis of silver nanoparticles using diatom Amphora sp. and its antimicrobial activity , 2015 .

[21]  N Sabaté,et al.  Silicon-based microfabricated microbial fuel cell toxicity sensor. , 2011, Biosensors & bioelectronics.

[22]  Mostafa M. Abo Elsoud,et al.  Synthesis and investigations on tellurium myconanoparticles , 2018, Biotechnology reports.

[23]  Stefano Toffanin,et al.  Portable Bio/Chemosensoristic Devices: Innovative Systems for Environmental Health and Food Safety Diagnostics , 2017, Front. Public Health.

[24]  Arben Merkoçi,et al.  Nanopaper as an Optical Sensing Platform. , 2015, ACS nano.

[25]  Paul Gatenholm,et al.  Bacterial nanocellulose : a sophisticated multifunctional material , 2013 .

[26]  Sureshbabu Ram Kumar Pandian,et al.  Biosynthesis, purification and characterization of silver nanoparticles using Escherichia coli. , 2009, Colloids and surfaces. B, Biointerfaces.

[27]  Jinhuai Liu,et al.  Extracellular biosynthesis and transformation of selenium nanoparticles and application in H2O2 biosensor. , 2010, Colloids and surfaces. B, Biointerfaces.

[28]  R. Venkatesan,et al.  Fungal based synthesis of silver nanoparticles--an effect of temperature on the size of particles. , 2009, Colloids and surfaces. B, Biointerfaces.

[29]  Wei Gao,et al.  Nanomanufacturing—Perspective and applications , 2017 .

[30]  M. Terracciano,et al.  Diatoms Green Nanotechnology for Biosilica-Based Drug Delivery Systems , 2018, Pharmaceutics.

[31]  D. Bazylinski,et al.  Applications of Magnetotactic Bacteria, Magnetosomes and Magnetosome Crystals in Biotechnology and Nanotechnology: Mini-Review , 2018, Molecules.

[32]  A. Scheffel,et al.  Exploiting algal mineralization for nanotechnology: bringing coccoliths to the fore. , 2018, Current opinion in biotechnology.

[33]  Nicole Poulsen,et al.  Diatoms-from cell wall biogenesis to nanotechnology. , 2008, Annual review of genetics.

[34]  Alan X. Wang,et al.  Diatomite Photonic Crystals for Facile On-Chip Chromatography and Sensing of Harmful Ingredients from Food , 2018, Materials.

[35]  Hookeun Lee,et al.  De novo transcriptome profile of coccolithophorid alga Emiliania huxleyi CCMP371 at different calcium concentrations with proteome analysis , 2019, PLoS ONE.

[36]  E. Wang,et al.  Biosynthesis of gold nanoparticles assisted by Escherichia coli DH5α and its application on direct electrochemistry of hemoglobin , 2007 .

[37]  Se-kwon Kim,et al.  Extracellular synthesis of gold bionanoparticles by Nocardiopsis sp. and evaluation of its antimicrobial, antioxidant and cytotoxic activities , 2015, Bioprocess and Biosystems Engineering.

[38]  A. O'Mullane,et al.  Bacterial kinetics-controlled shape-directed biosynthesis of silver nanoplates using Morganella psychrotolerans. , 2011, Langmuir : the ACS journal of surfaces and colloids.

[39]  S. Prasad,et al.  Biogenic nanoporous silica-based sensor for enhanced electrochemical detection of cardiovascular biomarkers proteins. , 2010, Biosensors & bioelectronics.

[40]  Rishikesh Pandey,et al.  Engineering tailored nanoparticles with microbes: quo vadis? , 2016, Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology.

[41]  Mario Khalil Habeeb Biosynthesis of nanoparticles by microorganisms and their applications , 2013 .

[42]  O. Inganäs,et al.  Diatom frustules protect DNA from ultraviolet light , 2018, Scientific Reports.

[43]  Jun Yang,et al.  Shewanella oneidensis MR-1 bacterial nanowires exhibit p-type, tunable electronic behavior. , 2013, Nano letters.

[44]  Michaela A. Teravest,et al.  An arsenic-specific biosensor with genetically engineered Shewanella oneidensis in a bioelectrochemical system. , 2014, Biosensors & bioelectronics.

[45]  G. Farinola,et al.  In vivo doped biosilica from living Thalassiosira weissflogii diatoms with a triethoxysilyl functionalized red emitting fluorophore , 2018 .

[46]  T. Salah,et al.  Biosynthesis of size controlled silver nanoparticles by Fusarium oxysporum, their antibacterial and antitumor activities , 2015 .

[47]  Shuxia Wang,et al.  pH-responsive release behavior and anti-bacterial activity of bacterial cellulose-silver nanocomposites. , 2015, International journal of biological macromolecules.

[48]  Xin Wang,et al.  Concentration responses of toxicity sensor with Shewanella oneidensis MR-1 growing in bioelectrochemical systems. , 2013, Biosensors & bioelectronics.

[49]  Dusan Losic,et al.  Diatomaceous Lessons in Nanotechnology and Advanced Materials , 2009 .

[50]  Alan X. Wang,et al.  Microfluidic Diatomite Analytical Devices for Illicit Drug Sensing with ppb-Level Sensitivity. , 2018, Sensors and actuators. B, Chemical.

[51]  T. Park,et al.  Recombinant Escherichia coli as a biofactory for various single- and multi-element nanomaterials , 2018, Proceedings of the National Academy of Sciences.

[52]  T. C. Taranath,et al.  Biosynthesis of nanoparticles using microbes- a review. , 2014, Colloids and surfaces. B, Biointerfaces.

[53]  Clayton Jeffryes,et al.  Two-stage photobioreactor process for the metabolic insertion of nanostructured germanium into the silica microstructure of the diatom Pinnularia sp. , 2008 .

[54]  Priyanka Uddandarao,et al.  Bioinspired ZnS:Gd Nanoparticles Synthesized from an Endophytic Fungi Aspergillus flavus for Fluorescence-Based Metal Detection , 2019, Biomimetics.

[55]  Chris Yuan,et al.  Environmental Implications of Nano-manufacturing , 2013 .

[56]  D. Pang,et al.  ATP synthesis in the energy metabolism pathway: a new perspective for manipulating CdSe quantum dots biosynthesized in Saccharomyces cerevisiae , 2017, International journal of nanomedicine.

[57]  A. Okoh,et al.  Bacterial Exopolysaccharides: Functionality and Prospects , 2012, International journal of molecular sciences.

[58]  Oleg Inshakov,et al.  World market for nanomaterials: structure and trends , 2017 .

[59]  M. Gu,et al.  A new coccolith modified electrode-based biosensor using a cognate pair of aptamers with sandwich-type binding. , 2019, Biosensors & bioelectronics.

[60]  Elisa Michelini,et al.  Bioengineered bioluminescent magnetotactic bacteria as a powerful tool for chip-based whole-cell biosensors. , 2013, Lab on a chip.

[61]  Si Amar Dahoumane,et al.  Microalgae: An outstanding tool in nanotechnology , 2016 .

[62]  T. Seo,et al.  In vivo synthesis of diverse metal nanoparticles by recombinant Escherichia coli. , 2010, Angewandte Chemie.

[63]  F. Monte,et al.  Integration of TiO2 into the diatom Thalassiosira weissflogii during frustule synthesis , 2013, Scientific Reports.

[64]  P. Maddalena,et al.  Marine diatoms as optical biosensors. , 2009, Biosensors & bioelectronics.

[65]  Chang Ming Li,et al.  Extracellular microbial synthesis of biocompatible CdTe quantum dots. , 2010, Acta biomaterialia.

[66]  K. Matsushita,et al.  Superfine bacterial nanocellulose produced by reverse mutations in the bcsC gene during adaptive breeding of Komagataeibacter oboediens. , 2019, Carbohydrate polymers.

[67]  S. Mériaux,et al.  Genetically tailored magnetosomes used as MRI probe for molecular imaging of brain tumor. , 2017, Biomaterials.

[68]  Luminescence studies of fresh water diatom frustules , 2010 .

[69]  A. Parker,et al.  Modification of the physical and optical properties of the frustule of the diatom Coscinodiscus wailesii by nickel sulfate , 2007 .

[70]  Lei Yan,et al.  Bacterial magnetosome and its potential application. , 2017, Microbiological research.

[71]  N. Voelcker,et al.  Electroless Gold-Modified Diatoms as Surface-Enhanced Raman Scattering Supports , 2016, Nanoscale Research Letters.

[72]  G. Rorrer,et al.  Micro-photoluminescence of single living diatom cells. , 2016, Luminescence : the journal of biological and chemical luminescence.

[73]  K. Kathiresan,et al.  Fungal enzyme-mediated synthesis of chitosan nanoparticles and its biocompatibility, antioxidant and bactericidal properties. , 2018, International journal of biological macromolecules.

[74]  Fernando Dourado,et al.  Molecular aspects of bacterial nanocellulose biosynthesis , 2019, Microbial biotechnology.

[75]  Hamed Golmohammadi,et al.  Green in-situ synthesized silver nanoparticles embedded in bacterial cellulose nanopaper as a bionanocomposite plasmonic sensor. , 2015, Biosensors & bioelectronics.

[76]  François Guyot,et al.  Chains of magnetosomes extracted from AMB-1 magnetotactic bacteria for application in alternative magnetic field cancer therapy. , 2011, ACS nano.

[77]  S. Eom,et al.  Silver nanoparticles inhibit VEGF induced cell proliferation and migration in bovine retinal endothelial cells. , 2009, Colloids and surfaces. B, Biointerfaces.

[78]  D. Joy,et al.  Biofabrication of discrete spherical gold nanoparticles using the metal-reducing bacterium Shewanella oneidensis. , 2011, Acta biomaterialia.

[79]  G. Farinola,et al.  Multiple Routes to Smart Nanostructured Materials from Diatom Microalgae: A Chemical Perspective , 2018, Advanced materials.

[80]  N. Kröger,et al.  Control of biosilica morphology and mechanical performance by the conserved diatom gene Silicanin-1 , 2019, Communications Biology.

[81]  T. Fuhrmann,et al.  Diatoms as living photonic crystals , 2004 .

[82]  Clayton Jeffryes,et al.  Biosynthesis of silicon-germanium oxide nanocomposites by the marine diatom Nitzschia frustulum. , 2005, Journal of nanoscience and nanotechnology.

[83]  Arben Merkoçi,et al.  Nanocellulose in Sensing and Biosensing , 2017 .

[84]  B. Öztürk Intracellular and extracellular green synthesis of silver nanoparticles using Desmodesmus sp.: their Antibacterial and antifungal effects , 2019 .

[85]  J. Jiao,et al.  Biological fabrication of photoluminescent nanocomb structures by metabolic incorporation of germanium into the biosilica of the diatom Nitzschia frustulum. , 2008, ACS nano.

[86]  J. Jiao,et al.  Metabolic insertion of nanostructured TiO2 into the patterned biosilica of the diatom Pinnularia sp. by a two-stage bioreactor cultivation process. , 2008, ACS nano.

[87]  Yanyan Su,et al.  Effects of abiotic factors on the nanostructure of diatom frustules—ranges and variability , 2018, Applied Microbiology and Biotechnology.

[88]  S. Gurunathan,et al.  Green synthesis of graphene and its cytotoxic effects in human breast cancer cells , 2013, International journal of nanomedicine.

[89]  S. Brar,et al.  Green approach for nanoparticle biosynthesis by fungi: current trends and applications , 2012, Critical reviews in biotechnology.

[90]  P. Gnanamoorthy,et al.  Natural nanoporous silica frustules from marine diatom as a biocarrier for drug delivery , 2014, Journal of Porous Materials.

[91]  Joseph M. DeSimone,et al.  Strategies in the design of nanoparticles for therapeutic applications , 2010, Nature Reviews Drug Discovery.

[92]  S. Soda,et al.  Effects of culture conditions of Pseudomonas aeruginosa strain RB on the synthesis of CdSe nanoparticles. , 2015, Journal of bioscience and bioengineering.

[93]  M. Cesarelli,et al.  Silica diatom shells tailored with Au nanoparticles enable sensitive analysis of molecules for biological, safety and environment applications , 2018, Nanoscale Research Letters.

[94]  Jan Grimm,et al.  Nanoparticles for imaging: top or flop? , 2014, Radiology.

[95]  P. Gopal,et al.  Cyanobacteria assisted biosynthesis of silver nanoparticles—a potential antileukemic agent , 2016, Journal of Applied Phycology.

[96]  M. Arasu,et al.  Characterization of Silver Nanomaterials Derived from Marine Streptomyces sp. Al-Dhabi-87 and Its In Vitro Application against Multidrug Resistant and Extended-Spectrum Beta-Lactamase Clinical Pathogens , 2018, Nanomaterials.

[97]  Yu Wang,et al.  Multi-layer hierarchical array fabricated with diatom frustules for highly sensitive bio-detection applications , 2014 .

[98]  S. Tripathy,et al.  Microbial synthesis of gold nanoparticles using the fungus Penicillium brevicompactum and their cytotoxic effects against mouse mayo blast cancer C2C12 cells , 2011, Applied Microbiology and Biotechnology.

[99]  S. Iravani,et al.  Biosynthesis of silver nanoparticles using Saccharomyces cerevisiae , 2016, Artificial cells, nanomedicine, and biotechnology.

[100]  S. Zinjarde,et al.  Influence of biomass and gold salt concentration on nanoparticle synthesis by the tropical marine yeast Yarrowia lipolytica NCIM 3589. , 2009, Colloids and surfaces. B, Biointerfaces.

[101]  Li Zhang,et al.  Biological synthesis of high-conductive pili in aerobic bacterium Pseudomonas aeruginosa , 2018, Applied Microbiology and Biotechnology.

[102]  G. A. Ahmed,et al.  Synthesis of Ag nanoparticles using diatom cells for ammonia sensing , 2017 .

[103]  E. Sholkamy,et al.  Anticancer activity of biostabilized selenium nanorods synthesized by Streptomyces bikiniensis strain Ess_amA-1 , 2015, International journal of nanomedicine.

[104]  R. Nayak,et al.  Microalga Scenedesmus sp.: A potential low-cost green machine for silver nanoparticle synthesis. , 2014, Journal of microbiology and biotechnology.

[105]  T. Shanmugasundaram,et al.  Biomedical potential of actinobacterially synthesized selenium nanoparticles with special reference to anti-biofilm, anti-oxidant, wound healing, cytotoxic and anti-viral activities. , 2015, Journal of trace elements in medicine and biology : organ of the Society for Minerals and Trace Elements.

[106]  S. Gurunathan,et al.  Biosynthesis of silver and gold nanoparticles using Brevibacterium casei. , 2010, Colloids and surfaces. B, Biointerfaces.

[107]  Dongyun Zheng,et al.  Preparation and application of a novel vanillin sensor based on biosynthesis of Au-Ag alloy nanoparticles , 2010 .

[108]  Gregory L. Rorrer,et al.  Photoluminescence Detection of Biomolecules by Antibody‐Functionalized Diatom Biosilica , 2009 .

[109]  B. Rajmohan,et al.  Biologically synthesized PbS nanoparticles for the detection of arsenic in water , 2017 .

[110]  Peilong Tian,et al.  Self-Assembled Exopolysaccharide Nanoparticles for Bioremediation and Green Synthesis of Noble Metal Nanoparticles. , 2017, ACS applied materials & interfaces.

[111]  Wei Wang,et al.  Electroluminescence and Photoluminescence from Nanostructured Diatom Frustules Containing Metabolically Inserted Germanium , 2008 .

[112]  Derek R Lovley,et al.  Microbial nanowires: a new paradigm for biological electron transfer and bioelectronics. , 2012, ChemSusChem.