Amino acid transport in thermophiles: characterization of an arginine-binding protein in Thermotoga maritima.
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Gabriella Pocsfalvi | Sabato D'Auria | Bryan S. Der | Bryan S Der | Matthew S. Luchansky | S. d'Auria | D. Marasco | Daniela Marasco | Matthew S Luchansky | J. Dattelbaum | Luisa Iozzino | Jonathan D Dattelbaum | G. Pocsfalvi | L. Iozzino
[1] Robert Huber,et al. Thermotoga maritima sp. nov. represents a new genus of unique extremely thermophilic eubacteria growing up to 90°C , 1986, Archives of Microbiology.
[2] Yiling Fang,et al. A Bacterial Arginine-Agmatine Exchange Transporter Involved in Extreme Acid Resistance* , 2007, Journal of Biological Chemistry.
[3] J. Lakowicz. Principles of fluorescence spectroscopy , 1983 .
[4] H. Hellinga,et al. Structural Analysis of a Periplasmic Binding Protein in the Tripartite ATP-independent Transporter Family Reveals a Tetrameric Assembly That May Have a Role in Ligand Transport* , 2008, Journal of Biological Chemistry.
[5] G. Unden,et al. A third periplasmic transport system for l‐arginine in Escherichia coli: molecular characterization of the artPIQMJ genes, arginine binding and transport , 1995, Molecular microbiology.
[6] Marcus Fehr,et al. Construction and optimization of a family of genetically encoded metabolite sensors by semirational protein engineering , 2005, Protein science : a publication of the Protein Society.
[7] M. Marcus,et al. Genetic Analysis of the Glutamate Permease in Escherichia coli K-12 , 1969, Journal of bacteriology.
[8] T. Nohno,et al. Cloning and complete nucleotide sequence of the Escherichia coli glutamine permease operon (glnHPQ) , 1986, Molecular and General Genetics MGG.
[9] J. Pandit,et al. Three-dimensional structures of the periplasmic lysine/arginine/ornithine-binding protein with and without a ligand. , 1994, The Journal of biological chemistry.
[10] I Gryczynski,et al. Glucose sensor for low-cost lifetime-based sensing using a genetically engineered protein. , 1999, Analytical biochemistry.
[11] S. Loefas,et al. Immobilization of proteins to a carboxymethyldextran-modified gold surface for biospecific interaction analysis in surface plasmon resonance sensors. , 1991, Analytical biochemistry.
[12] S. Daunert,et al. A fluorescence-based sensing system for the environmental monitoring of nickel using the nickel binding protein from Escherichia coli , 2002, Analytical and bioanalytical chemistry.
[13] M. Eftink,et al. Dynamics of a protein matrix revealed by fluorescence quenching. , 1975, Proceedings of the National Academy of Sciences of the United States of America.
[14] C. Higgins,et al. ABC transporters: from microorganisms to man. , 1992, Annual review of cell biology.
[15] H W Hellinga,et al. The rational design of allosteric interactions in a monomeric protein and its applications to the construction of biosensors. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[16] G. F. Ames. Bacterial periplasmic transport systems: structure, mechanism, and evolution. , 1986, Annual review of biochemistry.
[17] David Pignol,et al. Crystal structures of an Extracytoplasmic Solute Receptor from a TRAP transporter in its open and closed forms reveal a helix-swapped dimer requiring a cation for alpha-keto acid binding , 2020 .
[18] S. Brunak,et al. Locating proteins in the cell using TargetP, SignalP and related tools , 2007, Nature Protocols.
[19] Bryan S. Der,et al. Analysis of ligand binding to a ribose biosensor using site‐directed mutagenesis and fluorescence spectroscopy , 2007, Protein science : a publication of the Protein Society.
[20] G. Fields,et al. Solid phase peptide synthesis utilizing 9-fluorenylmethoxycarbonyl amino acids. , 2009, International journal of peptide and protein research.
[21] S. d'Auria,et al. Conformational stability and domain coupling in D-glucose/D-galactose-binding protein from Escherichia coli. , 2004, The Biochemical journal.
[22] Loren L Looger,et al. Computational design of receptors for an organophosphate surrogate of the nerve agent soman. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[23] H. Hellinga,et al. Periplasmic binding proteins: a versatile superfamily for protein engineering. , 2004, Current opinion in structural biology.
[24] C. Ouzounis,et al. Analysis of the Thermotoga maritima genome combining a variety of sequence similarity and genome context tools. , 2000, Nucleic acids research.
[25] L. Looger,et al. Construction of a fluorescent biosensor family , 2002, Protein science : a publication of the Protein Society.
[26] M H Saier,et al. Structural, functional, and evolutionary relationships among extracellular solute-binding receptors of bacteria , 1993, Microbiological reviews.
[27] J. Lakowicz,et al. Optical determination of glutamine using a genetically engineered protein. , 2001, Analytical biochemistry.
[28] Jue Chen,et al. Structure, Function, and Evolution of Bacterial ATP-Binding Cassette Systems , 2008, Microbiology and Molecular Biology Reviews.
[29] S. Salzberg,et al. Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima , 1999, Nature.
[30] C. Woese,et al. Were the original eubacteria thermophiles? , 1987, Systematic and applied microbiology.
[31] Y. J. Sun,et al. The structure of glutamine-binding protein complexed with glutamine at 1.94 A resolution: comparisons with other amino acid binding proteins. , 1998, Journal of molecular biology.
[32] H. Hellinga,et al. Structure‐based design of robust glucose biosensors using a Thermotoga maritima periplasmic glucose‐binding protein , 2007, Protein science : a publication of the Protein Society.
[33] K. Noll,et al. Substrate Specificities and Expression Patterns Reflect the Evolutionary Divergence of Maltose ABC Transporters in Thermotoga maritima , 2005, Journal of bacteriology.
[34] D. Swofford. PAUP*: Phylogenetic analysis using parsimony (*and other methods), Version 4.0b10 , 2002 .
[35] L. Looger,et al. A novel analytical method for in vivo phosphate tracking , 2006, FEBS letters.
[36] S Brunak,et al. Structural analysis of DNA sequence: evidence for lateral gene transfer in Thermotoga maritima. , 2000, Nucleic acids research.
[37] R. Daniel,et al. An extremely thermostable xylanase from the thermophilic eubacterium Thermotoga. , 1991, The Biochemical journal.
[38] J. Corrie,et al. Direct, real-time measurement of rapid inorganic phosphate release using a novel fluorescent probe and its application to actomyosin subfragment 1 ATPase. , 1994, Biochemistry.
[39] K. Nishikawa,et al. Domain dislocation: a change of core structure in periplasmic binding proteins in their evolutionary history. , 1999, Journal of molecular biology.
[40] Purification, crystallization and preliminary X-ray diffraction analysis of the putative ABC transporter ATP-binding protein from Thermotoga maritima. , 2008, Acta crystallographica. Section F, Structural biology and crystallization communications.
[41] Bryan S. Der,et al. Construction of a reagentless glucose biosensor using molecular exciton luminescence. , 2008, Analytical biochemistry.
[42] Loren L Looger,et al. Conversion of a Putative Agrobacterium Sugar-binding Protein into a FRET Sensor with High Selectivity for Sucrose* , 2006, Journal of Biological Chemistry.
[43] A. Vahedi-Faridi,et al. Crystal structures and mutational analysis of the arginine-, lysine-, histidine-binding protein ArtJ from Geobacillus stearothermophilus. Implications for interactions of ArtJ with its cognate ATP-binding cassette transporter, Art(MP)2. , 2008, Journal of molecular biology.
[44] L. Looger,et al. Computational design of receptor and sensor proteins with novel functions , 2003, Nature.
[45] K. Nikaido,et al. Purification and characterization of the periplasmic lysine-, arginine-, ornithine-binding protein (LAO) from Salmonella typhimurium. , 1992, The Journal of biological chemistry.
[46] Matthew R. Johnson,et al. Microbial biochemistry, physiology, and biotechnology of hyperthermophilic Thermotoga species. , 2006, FEMS microbiology reviews.
[47] Construction and Characterization of Chimeric Proteins Composed of Type-1 and Type-2 Periplasmic Binding Proteins MglB and ArgT , 2004, Bioscience, biotechnology, and biochemistry.