From IMGT-ONTOLOGY to IMGT/LIGMotif: the IMGT® standardized approach for immunoglobulin and T cell receptor gene identification and description in large genomic sequences
暂无分享,去创建一个
[1] M. Borodovsky,et al. Gene identification in novel eukaryotic genomes by self-training algorithm , 2005, Nucleic acids research.
[2] Marie-Paule Lefranc,et al. Recovering probabilities for nucleotide trimming processes for T cell receptor TRA and TRG V-J junctions analyzed with IMGT tools , 2008, BMC Bioinformatics.
[3] Donna R. Maglott,et al. RefSeq and LocusLink: NCBI gene-centered resources , 2001, Nucleic Acids Res..
[4] S. Karlin,et al. Prediction of complete gene structures in human genomic DNA. , 1997, Journal of molecular biology.
[5] Jérôme Lane,et al. IMGT®, the international ImMunoGeneTics information system® , 2004, Nucleic Acids Res..
[6] Mark Borodovsky,et al. Statistical significance in biological sequence analysis , 2006, Briefings Bioinform..
[7] Sean R. Eddy,et al. Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids , 1998 .
[8] Gérard Lefranc,et al. The Immunoglobulin FactsBook , 2001 .
[9] R. Durbin,et al. GeneWise and Genomewise. , 2004, Genome research.
[10] Andrew M. Jenkinson,et al. Ensembl 2009 , 2008, Nucleic Acids Res..
[11] Gérard Lefranc,et al. The T cell receptor factsbook , 2001 .
[12] Mathew W. Wright,et al. Guidelines for human gene nomenclature. , 2002, Genomics.
[13] K. Calame,et al. An lmmunoglobulin Heavy Chain Variable Region Gene Is Generated from Three Segments of DNA : VH , 2004 .
[14] Stanley Letovsky,et al. GDB: the Human Genome Database , 1998, Nucleic Acids Res..
[15] Jérôme Lane,et al. IMGT-Kaleidoscope, the formal IMGT-ONTOLOGY paradigm. , 2008, Biochimie.
[16] Cyrus Chothia,et al. Exegesis: a procedure to improve gene predictions and its use to find immunoglobulin superfamily proteins in the human and mouse genomes. , 2003, Nucleic acids research.
[17] Marie-Paule Lefranc,et al. WHO-IUIS Nomenclature Subcommittee for immunoglobulins and T cell receptors report , 2007, Immunogenetics.
[18] Marie-Paule Lefranc,et al. IMGT/V-QUEST: the highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysis , 2008, Nucleic Acids Res..
[19] Marie-Paule Lefranc. WHO-IUIS Nomenclature Subcommittee for immunoglobulins and T cell receptors report August 2007, 13th International Congress of Immunology, Rio de Janeiro, Brazil. , 2008, Developmental and comparative immunology.
[20] James G. R. Gilbert,et al. The vertebrate genome annotation (Vega) database , 2004, Nucleic Acids Res..
[21] R. Durbin,et al. The Sequence Ontology: a tool for the unification of genome annotations , 2005, Genome Biology.
[22] M. Neuberger,et al. Somatic hypermutation: activation-induced deaminase for C/G followed by polymerase η for A/T , 2007, The Journal of experimental medicine.
[23] Marie-Paule Lefranc,et al. IMGT-Choreography for immunogenetics and immunoinformatics , 2004, Silico Biol..
[24] Marie-Paule Lefranc,et al. Ontology for immunogenetics: the IMGT-ONTOLOGY , 1999, Bioinform..
[25] International Human Genome Sequencing Consortium. Initial sequencing and analysis of the human genome , 2001, Nature.
[26] Hitoshi Sakano,et al. Sequences at the somatic recombination sites of immunoglobulin light-chain genes , 1979, Nature.
[27] Marie-Paule Lefranc,et al. IMGT , the international ImMunoGeneTics information system , 2003 .
[28] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[29] L. Hood,et al. An immunoglobulin heavy chain variable region gene is generated from three segments of DNA: VH, D and JH , 1980, Cell.
[30] Leroy Hood,et al. IgG antibodies to phosphorylcholine exhibit more diversity than their IgM counterparts , 1981, Nature.
[31] Tatiana A. Tatusova,et al. Entrez Gene: gene-centered information at NCBI , 2004, Nucleic Acids Res..
[32] Michael R. Brent,et al. Using Multiple Alignments to Improve Gene Prediction , 2005, RECOMB.
[33] F. Alt,et al. Joining of immunoglobulin heavy chain gene segments: implications from a chromosome with evidence of three D-JH fusions. , 1982, Proceedings of the National Academy of Sciences of the United States of America.
[34] D. Mccormick. Sequence the Human Genome , 1986, Bio/Technology.
[35] Marie-Paule Lefranc,et al. IMGT-ONTOLOGY for immunogenetics and immunoinformatics , 2003, Silico Biol..
[36] Patrice Duroux,et al. IMGT/LIGM-DB, the IMGT® comprehensive database of immunoglobulin and T cell receptor nucleotide sequences , 2005, Nucleic Acids Res..