Combinatorial control of diverse metabolic and physiological functions by transcriptional regulators of the yeast sulfur assimilation pathway
暂无分享,去创建一个
David Botstein | Harmen J. Bussemaker | R. Scott McIsaac | Olivia Ho-Shing | D. Botstein | H. Bussemaker | R. McIsaac | A. Petti | Allegra A. Petti | O. Ho-Shing | Olivia Ho-Shing | R. Scott McIsaac
[1] Ronald W. Davis,et al. Yeast centromere binding protein CBF1, of the helix-loop-helix protein family, is required for chromosome stability and methionine prototrophy , 1990, Cell.
[2] A. Kudlicki,et al. Logic of the Yeast Metabolic Cycle: Temporal Compartmentalization of Cellular Processes , 2005, Science.
[3] S. Shen-Orr,et al. Network motifs: simple building blocks of complex networks. , 2002, Science.
[4] L. Kuras,et al. Transcriptional plasticity through differential assembly of a multiprotein activation complex , 2010, Nucleic acids research.
[5] Mikael Bodén,et al. MEME Suite: tools for motif discovery and searching , 2009, Nucleic Acids Res..
[6] P. Blaiseau,et al. Multiple transcriptional activation complexes tether the yeast activator Met4 to DNA , 1998, The EMBO journal.
[7] Denis Thieffry,et al. RSAT 2011: regulatory sequence analysis tools , 2011, Nucleic Acids Res..
[8] Eunjee Lee,et al. Identifying the genetic determinants of transcription factor activity , 2010, Molecular systems biology.
[9] Daniel E. Newburger,et al. High-resolution DNA-binding specificity analysis of yeast transcription factors. , 2009, Genome research.
[10] L. Hartwell,et al. Control of cell division in Saccharomyces cerevisiae by methionyl-tRNA. , 1976, Proceedings of the National Academy of Sciences of the United States of America.
[11] Megan N. McClean,et al. Fast-acting and Nearly Gratuitous Induction of Gene Expression and Protein Depletion in Saccharomyces Cerevisiae Graduate Program in Quantitative and Computational Biology, And , 2022 .
[12] Olga G. Troyanskaya,et al. BIOINFORMATICS ORIGINAL PAPER doi:10.1093/bioinformatics/btm332 Data and text mining , 2022 .
[13] M. Tyers,et al. SCFMet30‐mediated control of the transcriptional activator Met4 is required for the G1–S transition , 2000 .
[14] Peter Kaiser,et al. A Dominant Suppressor Mutation of the met30 Cell Cycle Defect Suggests Regulation of the Saccharomyces cerevisiae Met4-Cbf1 Transcription Complex by Met32* , 2008, Journal of Biological Chemistry.
[15] M. Bard,et al. Transcription of the Yeast Iron Regulon Does Not Respond Directly to Iron but Rather to Iron-Sulfur Cluster Biosynthesis* , 2004, Journal of Biological Chemistry.
[16] André Nantel,et al. Evolutionary Tinkering with Conserved Components of a Transcriptional Regulatory Network , 2010, PLoS biology.
[17] J. Davies,et al. Molecular Biology of the Cell , 1983, Bristol Medico-Chirurgical Journal.
[18] Ting Wang,et al. An improved map of conserved regulatory sites for Saccharomyces cerevisiae , 2006, BMC Bioinformatics.
[19] David Botstein,et al. GO: : TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes , 2004, Bioinform..
[20] M. Tyers,et al. Feedback‐regulated degradation of the transcriptional activator Met4 is triggered by the SCFMet30 complex , 2000, The EMBO journal.
[21] J. Pronk,et al. The Genome-wide Transcriptional Responses of Saccharomyces cerevisiae Grown on Glucose in Aerobic Chemostat Cultures Limited for Carbon, Nitrogen, Phosphorus, or Sulfur* , 2003, The Journal of Biological Chemistry.
[22] W. Liang,et al. TM4 microarray software suite. , 2006, Methods in enzymology.
[23] John D. Storey,et al. Statistical significance for genomewide studies , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[24] G. Fink,et al. MAP kinase and cAMP filamentation signaling pathways converge on the unusually large promoter of the yeast FLO11 gene , 1999, The EMBO journal.
[25] M. Tyers,et al. SCF(Met30)-mediated control of the transcriptional activator Met4 is required for the G(1)-S transition. , 2000, The EMBO journal.
[26] S. Shen-Orr,et al. Network motifs in the transcriptional regulation network of Escherichia coli , 2002, Nature Genetics.
[27] Mike Tyers,et al. Dissection of Combinatorial Control by the Met4 Transcriptional Complex , 2010, Molecular biology of the cell.
[28] G. Church,et al. Identifying regulatory networks by combinatorial analysis of promoter elements , 2001, Nature Genetics.
[29] F. Young. Biochemistry , 1955, The Indian Medical Gazette.
[30] David Botstein,et al. Perturbation-based analysis and modeling of combinatorial regulation in the yeast sulfur assimilation pathway , 2012, Molecular biology of the cell.
[31] D. Botstein,et al. Coordinated regulation of sulfur and phospholipid metabolism reflects the importance of methylation in the growth of yeast , 2011, Molecular biology of the cell.
[32] R. Baker,et al. Isolation of the gene encoding the Saccharomyces cerevisiae centromere-binding protein CP1 , 1990, Molecular and cellular biology.
[33] R. Klausner,et al. AFT1: a mediator of iron regulated transcriptional control in Saccharomyces cerevisiae. , 1995, The EMBO journal.
[34] W. Liang,et al. 9) TM4 Microarray Software Suite , 2006 .
[35] Dominique Thomas,et al. Identification of the yeast methionine biosynthetic genes that require the centromere binding factor 1 for their transcriptional activation , 1995, FEBS letters.
[36] D. Thomas,et al. Functional analysis of Met4, a yeast transcriptional activator responsive to S-adenosylmethionine , 1995, Molecular and cellular biology.
[37] D. Botstein,et al. Survival of starving yeast is correlated with oxidative stress response and nonrespiratory mitochondrial function , 2011, Proceedings of the National Academy of Sciences.
[38] N. Friedman,et al. Structure and function of a transcriptional network activated by the MAPK Hog1 , 2008, Nature Genetics.
[39] R. Kornberg,et al. Isolation of a Saccharomyces cerevisiae centromere DNA-binding protein, its human homolog, and its possible role as a transcription factor , 1987, Molecular and cellular biology.
[40] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[41] R. Baker,et al. Purification of the yeast centromere binding protein CP1 and a mutational analysis of its binding site. , 1989, The Journal of biological chemistry.
[42] P. Blaiseau,et al. Met31p and Met32p, two related zinc finger proteins, are involved in transcriptional regulation of yeast sulfur amino acid metabolism , 1997, Molecular and cellular biology.
[43] Martha L Bulyk,et al. Non-DNA-binding cofactors enhance DNA-binding specificity of a transcriptional regulatory complex , 2011, Molecular systems biology.
[44] P. Kaiser,et al. The yeast ubiquitin ligase SCFMet30: connecting environmental and intracellular conditions to cell division , 2006, Cell Division.
[45] H. Kitano,et al. Regulation of yeast oscillatory dynamics , 2007, Proceedings of the National Academy of Sciences.
[46] Nicola J. Rinaldi,et al. Transcriptional Regulatory Networks in Saccharomyces cerevisiae , 2002, Science.
[47] Michael Ruogu Zhang,et al. Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. , 1998, Molecular biology of the cell.
[48] Stephen A Ramsey,et al. Transcriptional Responses to Fatty Acid Are Coordinated by Combinatorial Control , 2022 .