Evaluation of Parallel EDAs to Create Chemical Calibration Models

Estimation of Distribution Algorithms (EDAs) are a set of optimization techniques that have been successfully applied to different kinds of problems. In this paper, we deal with the creation of multivariate calibration models in quantitative chemistry. For this purpose, we use parallel implementations of two EDAs (EBNABIC and UMDA), using different approaches to create a calibration model using data obtained from controlled reactions. Once the calibration model has been trained, it can be used to predict initial concentrations for some species taking part in new reactions. The results show that these new approaches are able to obtain good-quality calibration models. Moreover, the use of parallel algorithms allows researchers to complete experiments faster and to study a wider set of alternative solutions.

[1]  Pedro Larrañaga,et al.  Estimation of Distribution Algorithms , 2002, Genetic Algorithms and Evolutionary Computation.

[2]  Erick Cantú-Paz,et al.  Feature Subset Selection by Estimation of Distribution Algorithms , 2002, GECCO.

[3]  H. Mühlenbein,et al.  From Recombination of Genes to the Estimation of Distributions I. Binary Parameters , 1996, PPSN.

[4]  J. A. Lozano,et al.  Estimation of Distribution Algorithms: A New Tool for Evolutionary Computation , 2001 .

[5]  S. Wold,et al.  PLS-regression: a basic tool of chemometrics , 2001 .

[6]  Núria Villegas Forn Desenvolupament de procediments cinètics per l'anàlisi de multicomponents , 2003 .

[7]  Pedro Larrañaga,et al.  Towards a New Evolutionary Computation - Advances in the Estimation of Distribution Algorithms , 2006, Towards a New Evolutionary Computation.

[8]  Alexander Mendiburu,et al.  Parallel EDAs to create multivariate calibration models for quantitative chemical applications , 2006, J. Parallel Distributed Comput..

[9]  R. Leardi,et al.  Genetic algorithms applied to feature selection in PLS regression: how and when to use them , 1998 .

[10]  Kimito Funatsu,et al.  GA Strategy for Variable Selection in QSAR Studies: Application of GA-Based Region Selection to a 3D-QSAR Study of Acetylcholinesterase Inhibitors , 1999, J. Chem. Inf. Comput. Sci..

[11]  David E. Goldberg,et al.  A Survey of Optimization by Building and Using Probabilistic Models , 2002, Comput. Optim. Appl..

[12]  Heinz Mühlenbein,et al.  The Equation for Response to Selection and Its Use for Prediction , 1997, Evolutionary Computation.

[13]  Alexander Mendiburu,et al.  Parallel implementation of EDAs based on probabilistic graphical models , 2005, IEEE Transactions on Evolutionary Computation.

[14]  Pedro Larrañaga,et al.  Feature Subset Selection by Bayesian network-based optimization , 2000, Artif. Intell..

[15]  Carlos Ubide,et al.  New way of application of the bromate-bromide mixture in kinetic analysis , 2001 .

[16]  Carlos Ubide,et al.  Multicomponent determinations using addition-generated reagent profiles and partial least squares regression , 2005 .

[17]  Pedro Larrañaga,et al.  Combinatonal Optimization by Learning and Simulation of Bayesian Networks , 2000, UAI.

[18]  David E. Goldberg,et al.  Genetic Algorithms in Search Optimization and Machine Learning , 1988 .

[19]  Pedro Larrañaga,et al.  Feature Subset Selection by Estimation of Distribution Algorithms , 2002, Estimation of Distribution Algorithms.