Development of new methods for the quantitative detection and typing of Lactobacillus parabuchneri in dairy products

[1]  U. Bütikofer,et al.  Fast detection and quantification of four dairy propionic acid bacteria in milk samples using real-time quantitative polymerase chain reaction , 2016 .

[2]  Torsten Seemann,et al.  Prokka: rapid prokaryotic genome annotation , 2014, Bioinform..

[3]  Alexandros Stamatakis,et al.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies , 2014, Bioinform..

[4]  R. Badertscher,et al.  The effect of Lactobacillus buchneri and Lactobacillus parabuchneri on the eye formation of semi-hard cheese , 2013 .

[5]  R. Tofalo,et al.  High content of biogenic amines in Pecorino cheeses. , 2013, Food microbiology.

[6]  Sergey I. Nikolenko,et al.  SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing , 2012, J. Comput. Biol..

[7]  Steven L Salzberg,et al.  Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.

[8]  D. Higgins,et al.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega , 2011, Molecular systems biology.

[9]  N. Nishino,et al.  Presence of sourdough lactic acid bacteria in commercial total mixed ration silage as revealed by denaturing gradient gel electrophoresis analysis , 2010, Letters in applied microbiology.

[10]  L. Beneduce,et al.  Biogenic amine in wines , 2010, Annals of Microbiology.

[11]  Gonçalo R. Abecasis,et al.  The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..

[12]  B. de Las Rivas,et al.  Updated Molecular Knowledge about Histamine Biosynthesis by Bacteria , 2008, Critical reviews in food science and nutrition.

[13]  Ibtissem Grissa,et al.  CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats , 2007, Nucleic Acids Res..

[14]  B. del Rio,et al.  Real-time polymerase chain reaction for quantitative detection of histamine-producing bacteria: use in cheese production. , 2006, Journal of dairy science.

[15]  M. Coton,et al.  Multiplex PCR for colony direct detection of Gram-positive histamine- and tyramine-producing bacteria. , 2005, Journal of microbiological methods.

[16]  W. N. Konings,et al.  Beer spoilage bacteria and hop resistance. , 2003, International journal of food microbiology.

[17]  C. Stoeckert,et al.  OrthoMCL: identification of ortholog groups for eukaryotic genomes. , 2003, Genome research.

[18]  R. Braun,et al.  The role of Lactobacillus buchneri in forage preservation. , 2003, Trends in biotechnology.

[19]  M. Casey,et al.  Comparison of partial tuf gene sequences for the identification of lactobacilli. , 2002, FEMS microbiology letters.

[20]  Janneke Krooneman,et al.  Anaerobic Conversion of Lactic Acid to Acetic Acid and 1,2-Propanediol by Lactobacillus buchneri , 2001, Applied and Environmental Microbiology.

[21]  W. Hammes,et al.  Effect of enhanced proteolysis on formation of biogenic amines by lactobacilli during Gouda cheese ripening. , 1998, International journal of food microbiology.

[22]  R. Maijala.  Formation of histamine and tyramine by some lactic acid bacteria in MRS‐broth and modified decarboxylation agar , 1993 .

[23]  W. P. Hammes,et al.  The genera Lactobacillus and Carnobacterium , 1992 .

[24]  F. Roche,et al.  Factors controlling histamine production in Swiss cheese inoculated with Lactobacillus buchneri. , 1990, Journal of dairy science.

[25]  H. Joosten,et al.  Detection, Growth, and Amine-Producing Capacity of Lactobacilli in Cheese , 1989, Applied and environmental microbiology.

[26]  M. Collins,et al.  Nucleic acid studies on some heterofermentative lactobacilli: Description of Lactobacillus malefermentans sp.nov. and Lactobacillus parabuchneri sp.nov. , 1988 .

[27]  M. C. Manca de Nadra,et al.  Arginine dihydrolase pathway in Lactobacillus buchneri: a review. , 1988, Biochimie.

[28]  S. Taylor,et al.  Isolation of histamine-producing Lactobacillus buchneri from Swiss cheese implicated in a food poisoning outbreak , 1985, Applied and environmental microbiology.

[29]  M. Rogosa,et al.  A MEDIUM FOR THE CULTIVATION OF LACTOBACILLI , 1960 .

[30]  Hae Choon Chang,et al.  Production of gamma-aminobutyric acid (GABA) by Lactobacillus buchneri isolated from kimchi and its neuroprotective effect on neuronal cells. , 2007, Journal of microbiology and biotechnology.

[31]  G. Benson,et al.  Tandem repeats finder: a program to analyze DNA sequences. , 1999, Nucleic acids research.