Orchestrating Medical Image Compression and Remote Segmentation Networks

Deep learning-based medical image segmentation on the cloud offers superb performance by harnessing the recent model innovation and hardware advancement. However, one major factor that limits its overall service speed is the long data transmission latency, which could far exceed the segmentation computation time. Existing image compression techniques are unable to achieve an efficient compression to dramatically reduce the data offloading overhead, while maintaining a high segmentation accuracy. The underlying reason is that they are all developed upon human visual system, whose image perception pattern could be fundamentally different from that of deep learning-based image segmentation. Motivated by this observation, in this paper, we propose a generative segmentation architecture consisting of a compression network, a segmentation network and a discriminator network. Our design orchestrates and coordinates segmentation and compression for simultaneous improvements of segmentation accuracy and compression efficiency, through a dedicated GAN architecture with novel loss functions. Experimental results on 2D and 3D medical images demonstrate that our design can reduce the bandwidth requirement by 2 orders-of-magnitude comparing with that of uncompressed images, and increase the accuracy of remote segmentation remarkably over the state-of-the-art solutions, truly accelerating the cloud-based medical imaging service.

[1]  Panos Nasiopoulos,et al.  3-D Scalable Medical Image Compression With Optimized Volume of Interest Coding , 2010, IEEE Transactions on Medical Imaging.

[2]  Lin Yang,et al.  Combining Fully Convolutional and Recurrent Neural Networks for 3D Biomedical Image Segmentation , 2016, NIPS.

[3]  Gregory K. Wallace,et al.  The JPEG still picture compression standard , 1992 .

[4]  Hao Chen,et al.  3D Deeply Supervised Network for Automatic Liver Segmentation from CT Volumes , 2016, MICCAI.

[5]  Ian Blanes,et al.  Diagnostically lossless coding of X-ray angiography images based on background suppression , 2016, Comput. Electr. Eng..

[6]  Adriaan J. de Lind van Wijngaarden,et al.  XG-fast: the 5th generation broadband , 2015, IEEE Communications Magazine.

[7]  Jiro Katto,et al.  Learning Image and Video Compression Through Spatial-Temporal Energy Compaction , 2019, 2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR).

[8]  Luc Van Gool,et al.  Generative Adversarial Networks for Extreme Learned Image Compression , 2018, 2019 IEEE/CVF International Conference on Computer Vision (ICCV).

[9]  Zhensheng Jia,et al.  Evolution and Trends of Broadband Access Technologies and Fiber-Wireless Systems , 2017 .

[10]  Seyed-Ahmad Ahmadi,et al.  V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation , 2016, 2016 Fourth International Conference on 3D Vision (3DV).

[11]  Hao Chen,et al.  Deep Contextual Networks for Neuronal Structure Segmentation , 2016, AAAI.

[12]  Tao Xu,et al.  SegAN: Adversarial Network with Multi-scale L1 Loss for Medical Image Segmentation , 2017, Neuroinformatics.

[13]  Jie Xu,et al.  DeepN-JPEG: A Deep Neural Network Favorable JPEG-based Image Compression Framework , 2018, 2018 55th ACM/ESDA/IEEE Design Automation Conference (DAC).

[14]  Hao Chen,et al.  VoxResNet: Deep voxelwise residual networks for brain segmentation from 3D MR images , 2017, NeuroImage.

[15]  Noel C. F. Codella,et al.  Skin lesion analysis toward melanoma detection: A challenge at the 2017 International symposium on biomedical imaging (ISBI), hosted by the international skin imaging collaboration (ISIC) , 2016, 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018).

[16]  Klaus H. Maier-Hein,et al.  nnU-Net: Breaking the Spell on Successful Medical Image Segmentation , 2019, ArXiv.

[17]  Yiyu Shi,et al.  Machine Vision Guided 3D Medical Image Compression for Efficient Transmission and Accurate Segmentation in the Clouds , 2019, 2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR).

[18]  Thomas Brox,et al.  3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation , 2016, MICCAI.

[19]  Jooyoung Lee,et al.  Context-adaptive Entropy Model for End-to-end Optimized Image Compression , 2018, ICLR.

[20]  Peter Schelkens,et al.  Wavelet based volumetric medical image compression , 2015, Signal Process. Image Commun..

[21]  Mbarek Marwan,et al.  Using cloud solution for medical image processing: Issues and implementation efforts , 2017, 2017 3rd International Conference of Cloud Computing Technologies and Applications (CloudTech).

[22]  Trevor N. Mudge,et al.  Neurosurgeon: Collaborative Intelligence Between the Cloud and Mobile Edge , 2017, ASPLOS.

[23]  Polina Golland,et al.  Interactive Whole-Heart Segmentation in Congenital Heart Disease , 2015, MICCAI.

[24]  Thomas Brox,et al.  U-Net: Convolutional Networks for Biomedical Image Segmentation , 2015, MICCAI.

[25]  Jason Cong,et al.  Scaling for edge inference of deep neural networks , 2018 .

[26]  Jinjun Xiong,et al.  SCNN: A General Distribution based Statistical Convolutional Neural Network with Application to Video Object Detection , 2019, AAAI.

[27]  David Minnen,et al.  Joint Autoregressive and Hierarchical Priors for Learned Image Compression , 2018, NeurIPS.

[28]  Ivo D Dinov,et al.  Volume and Value of Big Healthcare Data. , 2016, Journal of medical statistics and informatics.

[29]  Panos Nasiopoulos,et al.  This article has been accepted for publication in a future issue of this journal, but has not been fully edited. Content may change prior to final publication. 1 Symmetry-Based Scalable Lossless Compression of 3D Medical Image Data , 2022 .