Dosage compensation of the active X chromosome in mammals

Monosomy of the X chromosome owing to divergence between the sex chromosomes leads to dosage compensation mechanisms to restore balanced expression between the X and the autosomes. In Drosophila melanogaster, upregulation of the male X leads to dosage compensation. It has been hypothesized that mammals likewise upregulate their active X chromosome. Together with X inactivation, this mechanism would maintain balanced expression between the X chromosome and autosomes and between the sexes. Here, we show that doubling of the global expression level of the X chromosome leads to dosage compensation in somatic tissues from several mammalian species. X-linked genes are highly expressed in brain tissues, consistent with a role in cognitive functions. Furthermore, the X chromosome is expressed but not upregulated in spermatids and secondary oocytes, preserving balanced expression of the genome in these haploid cells. Upon fertilization, upregulation of the active X must occur to achieve the observed dosage compensation in early embryos.

[1]  P. Nelson,et al.  Project normal: Defining normal variance in mouse gene expression , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[2]  J. Rinn,et al.  Major molecular differences between mammalian sexes are involved in drug metabolism and renal function. , 2004, Developmental cell.

[3]  Jeannie T. Lee,et al.  Inheritance of a pre-inactivated paternal X chromosome in early mouse embryos , 2003, Nature.

[4]  J. McCarrey,et al.  Transcriptional analysis of the candidate spermatogenesis gene Ube1y and of the closely related Ube1x shows that they are coexpressed in spermatogonia and spermatids but are repressed in pachytene spermatocytes. , 1996, Developmental biology.

[5]  A. Su,et al.  Applications of a rat multiple tissue gene expression data set. , 2004, Genome research.

[6]  B. Charlesworth,et al.  The degeneration of Y chromosomes. , 2000, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[7]  H. Willard,et al.  X-inactivation profile reveals extensive variability in X-linked gene expression in females , 2005, Nature.

[8]  J. Don,et al.  Developmental schedule of the postnatal rat testis determined by flow cytometry. , 1998, Biology of reproduction.

[9]  Nicole C Riddle,et al.  Dosage balance in gene regulation: biological implications. , 2005, Trends in genetics : TIG.

[10]  R. Reeves,et al.  Global disruption of the cerebellar transcriptome in a Down syndrome mouse model. , 2003, Human molecular genetics.

[11]  W. Vogel,et al.  A high density of X-linked genes for general cognitive ability: a run-away process shaping human evolution? , 2001, Trends in genetics : TIG.

[12]  D. Reinberg,et al.  Epigenetic Dynamics of Imprinted X Inactivation During Early Mouse Development , 2004, Science.

[13]  M. Lyon Gene Action in the X-chromosome of the Mouse (Mus musculus L.) , 1961, Nature.

[14]  N. Schultz,et al.  A multitude of genes expressed solely in meiotic or postmeiotic spermatogenic cells offers a myriad of contraceptive targets , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[15]  N. Brockdorff,et al.  Reactivation of the Paternal X Chromosome in Early Mouse Embryos , 2004, Science.

[16]  Gartler Sm,et al.  Mammalian X-chromosome inactivation. , 1976 .

[17]  H. Ropers,et al.  X-linked mental retardation , 2005, Nature Reviews Genetics.

[18]  Ahmad M Khalil,et al.  Dynamic histone modifications mark sex chromosome inactivation and reactivation during mammalian spermatogenesis. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[19]  E. Moran,et al.  Expression of Genes Encoding Chromatin Regulatory Factors in Developing Rhesus Monkey Oocytes and Preimplantation Stage Embryos: Possible Roles in Genome Activation1 , 2004, Biology of reproduction.

[20]  M. Monk,et al.  Random X-chromosome inactivation in female primordial germ cells in the mouse. , 1981, Journal of embryology and experimental morphology.

[21]  J. McCarrey,et al.  Semiquantitative analysis of X-linked gene expression during spermatogenesis in the mouse: ethidium-bromide staining of RT-PCR products. , 1992, Genetic analysis, techniques and applications.

[22]  C. Disteche,et al.  Silence of the fathers: early X inactivation. , 2004, BioEssays : news and reviews in molecular, cellular and developmental biology.

[23]  Dr. Susumu Ohno Sex Chromosomes and Sex-Linked Genes , 1967, Monographs on Endocrinology.

[24]  N. Rao,et al.  Identification of discrete chromosomal deletion by binary recursive partitioning of microarray differential expression data , 2005, Journal of Medical Genetics.

[25]  S. Batalov,et al.  A gene atlas of the mouse and human protein-encoding transcriptomes. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[26]  Ronald W Davis,et al.  A genome-wide study of gene activity reveals developmental signaling pathways in the preimplantation mouse embryo. , 2004, Developmental cell.

[27]  Ulrich Schlecht,et al.  Expression profiling of mammalian male meiosis and gametogenesis identifies novel candidate genes for roles in the regulation of fertility. , 2003, Molecular biology of the cell.

[28]  Fanyi Zeng,et al.  Transcript profiling during preimplantation mouse development. , 2004, Developmental biology.

[29]  Stephen Welle,et al.  Gene expression profile of aging in human muscle. , 2003, Physiological genomics.

[30]  T. Straub,et al.  Dosage compensation in flies: Mechanism, models, mystery , 2005, FEBS letters.

[31]  大野 乾,et al.  Sex Chromosomes and Sex-Linked Genes , 1967 .

[32]  V. Chapman,et al.  Evidence of evolutionary up-regulation of the single active X chromosome in mammals based on Clc4 expression levels in Mus spretus and Mus musculus. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[33]  K. Yamakawa,et al.  Dosage-dependent over-expression of genes in the trisomic region of Ts1Cje mouse model for Down syndrome. , 2004, Human molecular genetics.

[34]  V. Monesi Differential rate of ribonucleic acid synthesis in the autosomes and sex chromosomes during male meiosis in the mouse , 2004, Chromosoma.

[35]  A. Orth,et al.  Large-scale analysis of the human and mouse transcriptomes , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[36]  R. Hammer,et al.  Defining the spermatogonial stem cell. , 2004, Developmental biology.

[37]  C. Disteche,et al.  Escape from X inactivation , 2003, Cytogenetic and Genome Research.

[38]  B. Oostra,et al.  Postmeiotic transcription of X and Y chromosomal genes during spermatogenesis in the mouse. , 1995, Developmental biology.

[39]  Wenbo Xu,et al.  Sister grouping of chimpanzees and humans as revealed by genome-wide phylogenetic analysis of brain gene expression profiles. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[40]  N. Hastie,et al.  Transcriptome analysis of human autosomal trisomy. , 2002, Human molecular genetics.

[41]  T. Mohandas,et al.  Differential expression of steroid sulphatase locus on active and inactive human X chromosome , 1982, Nature.

[42]  J. Malley,et al.  Global analysis of X-chromosome dosage compensation , 2006, Journal of biology.

[43]  R. Camerini-Otero,et al.  The mouse X chromosome is enriched for sex-biased genes not subject to selection by meiotic sex chromosome inactivation , 2004, Nature Genetics.

[44]  Jing Wang,et al.  Function-informed transcriptome analysis of Drosophila renal tubule , 2004, Genome Biology.

[45]  J. Birchler,et al.  Dosage Dependent Gene Regulation and the Compensation of the X Chromosome in Drosophila Males , 2003, Genetica.

[46]  A. Akhtar Dosage compensation: an intertwined world of RNA and chromatin remodelling. , 2003, Current opinion in genetics & development.

[47]  S. Gartler,et al.  Mammalian X-chromosome inactivation. , 2003, Advances in human genetics.

[48]  B. Charlesworth,et al.  The evolution of chromosomal sex determination and dosage compensation , 1996, Current Biology.

[49]  A. Sharov,et al.  Age-associated alteration of gene expression patterns in mouse oocytes. , 2004, Human molecular genetics.

[50]  R. Sparkes,et al.  Evidence for two functional X chromosomes in human oocytes. , 1972, Cell differentiation.