Cellular Semiotics And Signal Transduction

Semiosis, the processes of production, communication and interpretation of signs – coding and de-coding – takes place within and between organisms. The term “endosemiosis” refers to the processes of interpretation and sign transmission inside an organism (as opposed to “exosemiosis”, which refers to the processes of sign interpretation and transmission between organisms of the same or different species). In Biosemiotics it is customary to recognise the cell as the most elementary integration unit for semiosis. Therefore intra and intercellular communication constitute the departure point for the study of endosemiotics In contemporary molecular and cell biology, signal transduction research has remarkably contributed to a major paradigm shift in biology in which biology is now seen as a “science of sensing”. Once we recognise that sensing is one of the necessary properties of life, we cannot do without considering semiotic logic in order to construct our understanding of living phenomena. Given the central integrating role of signal transduction in physiological and ecological studies, this chapter outlines its semiotic implications.The multi-modality and modularity of signal molecules and relative “infrastructure” components poses one of the central problems for understanding metabolic codes: the occurrence of different instances of “cross-talk”, “redundancy” and “categorial sensing” at different hierarchical levels. The term “categorial sensing” captures very well the essence of the “outstanding question(s)” in signal transduction; i.e., how specificity is determined, how ubiquitous signals or messengers convey specific information, how undesired cross-talk is avoided, how redundancy integrates the system. This chapter proposes a basic conceptual toolbox for interpreting empirical data that deals with such puzzling phenomena from a biosemiotic perspective

[1]  J. Shapiro Genome System Architecture and Natural Genetic Engineering in Evolution , 1999, Annals of the New York Academy of Sciences.

[2]  C. Emmeche,et al.  From language to nature: The semiotic metaphor in biology , 1991 .

[3]  M. Berridge,et al.  The versatility and universality of calcium signalling , 2000, Nature Reviews Molecular Cell Biology.

[4]  S. Kraemer Steps to an Ecology of Mind: Gregory Bateson , 1993, British Journal of Psychiatry.

[5]  G. Bateson,et al.  Mind and Nature , 1980 .

[6]  G M Tomkins,et al.  The metabolic code. , 1975, Science.

[7]  Jesper Hoffmeyer Molecular Biology and Heredity. Semiotic Aspects , 1997 .

[8]  G. Bateson,et al.  Angels Fear: Towards an Epistemology of the Sacred , 1987 .

[9]  Marcello Barbieri,et al.  The Organic Codes - an introduction to semantic biology , 2002 .

[10]  Thomas A. Sebeok,et al.  Contributions to the doctrine of signs , 1976 .

[11]  C. Emmeche The Sarkar challenge to biosemiotics: Is there any information in a cell? , 1999 .

[12]  Jesper Hoffmeyer,et al.  Signs Of Meaning In The Universe , 1996 .

[13]  L. E. Bruni,et al.  A sign-theoretic approach to biotechnology , 2003 .

[14]  Claus Emmeche,et al.  Defining life as a semiotic phenomenon , 1998, Cybern. Hum. Knowing.

[15]  L. Bruni Does “quorum sensing” imply a new type of biological information? , 2002 .

[16]  C. Emmeche,et al.  Code-duality and the semiotics of nature , 1991 .

[17]  I. Baldwin,et al.  Merging molecular and ecological approaches in plant-insect interactions. , 2001, Current opinion in plant biology.

[18]  M. Berridge,et al.  Calcium signalling: dynamics, homeostasis and remodelling , 2003, Nature reviews. Molecular cell biology.

[19]  Anthony Wilden System and Structure: Essays in Communication and Exchange , 1972 .

[20]  Steve J. Heims,et al.  The Cybernetics Group , 1991 .

[21]  H. Lodish Molecular Cell Biology , 1986 .

[22]  C. Emmeche The computational notion of life , 1994 .

[23]  L. Caporale,et al.  Molecular strategies in biological evolution , 1999 .

[24]  E. Carafoli The calcium-signalling saga: tap water and protein crystals , 2003, Nature Reviews Molecular Cell Biology.

[25]  G. Bateson,et al.  Mind and Nature: A Necessary Unity , 1979 .

[26]  Marcello Barbieri,et al.  The Organic Codes , 2002 .

[27]  Thomas A. Sebeok,et al.  Biosemiotics: The Semiotic Web 1991 , 1992 .

[28]  Sahotra Sarkar,et al.  Biological Information: A Skeptical Look at Some Central Dogmas of Molecular Biology , 1996 .

[29]  S. Sarkar The Philosophy and History of Molecular Biology: New Perspectives , 2001 .