Heritable components of the human fecal microbiome are associated with visceral fat
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Emily R. Davenport | Justine W. Debelius | T. Spector | J. Bell | A. Clark | J. Raes | M. Jackson | R. Knight | M. Mangino | R. Ley | Julia Goodrich | S. Vieira-Silva | J. Debelius | M. Beaumont | I. Yet | T. Pallister | R. Knight | A. Clark | A. Clark
[1] T. Spector,et al. Heritable components of the human fecal microbiome are associated with visceral fat , 2016, Genome Biology.
[2] S. Simpson,et al. Integrative Physiology: At the Crossroads of Nutrition, Microbiota, Animal Physiology, and Human Health. , 2017, Cell metabolism.
[3] T. Spector,et al. A heritability-based comparison of methods used to cluster 16S rRNA gene sequences into operational taxonomic units , 2016, PeerJ.
[4] Emily R. Davenport,et al. Genetic Determinants of the Gut Microbiome in UK Twins. , 2016, Cell host & microbe.
[5] J. Raes,et al. Population-level analysis of gut microbiome variation , 2016, Science.
[6] Morris A. Swertz,et al. Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity , 2016, Science.
[7] H. Weiner,et al. The Host Shapes the Gut Microbiota via Fecal MicroRNA. , 2016, Cell host & microbe.
[8] S. Pettersson,et al. Helicobacter pylori and gut microbiota modulate energy homeostasis prior to inducing histopathological changes in mice , 2016, Gut microbes.
[9] Tim D Spector,et al. Proton pump inhibitors alter the composition of the gut microbiota , 2015, Gut.
[10] William A. Walters,et al. Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys , 2015, mSystems.
[11] Sarah L. Westcott,et al. De novo clustering methods outperform reference-based methods for assigning 16S rRNA gene sequences to operational taxonomic units , 2015, PeerJ.
[12] J. Štšepetova,et al. New insights into the impact of Lactobacillus population on host-bacteria metabolic interplay , 2015, Oncotarget.
[13] S. Bordenstein,et al. Rethinking heritability of the microbiome , 2015, Science.
[14] F. Levenez,et al. Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology , 2015, Gut.
[15] Jeroen Raes,et al. Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates , 2015, Gut.
[16] Ross M. Fraser,et al. Genetic studies of body mass index yield new insights for obesity biology , 2015, Nature.
[17] Jeroen Raes,et al. How informative is the mouse for human gut microbiota research? , 2015, Disease Models & Mechanisms.
[18] Tamara S. Roman,et al. New genetic loci link adipose and insulin biology to body fat distribution , 2014, Nature.
[19] Austin G. Davis-Richardson,et al. Early Childhood Gut Microbiomes Show Strong Geographic Differences Among Subjects at High Risk for Type 1 Diabetes , 2014, Diabetes Care.
[20] H. Daniel,et al. Glyoxylate, a New Marker Metabolite of Type 2 Diabetes , 2014, Journal of diabetes research.
[21] R. Knight,et al. Meta‐analyses of human gut microbes associated with obesity and IBD , 2014, FEBS letters.
[22] Angela C. Poole,et al. Human Genetics Shape the Gut Microbiome , 2014, Cell.
[23] Rob Knight,et al. The Earth Microbiome project: successes and aspirations , 2014, BMC Biology.
[24] D. Bates,et al. Fitting Linear Mixed-Effects Models Using lme4 , 2014, 1406.5823.
[25] E. Murphy,et al. Exercise and associated dietary extremes impact on gut microbial diversity , 2014, Gut.
[26] Timothy J. Laurent,et al. A Taxonomic Signature of Obesity in the Microbiome? Getting to the Guts of the Matter , 2014, PloS one.
[27] C. Bouchard,et al. Findings from the Quebec Family Study on the Etiology of Obesity: Genetics and Environmental Highlights , 2014, Current Obesity Reports.
[28] Mark I. McCarthy,et al. Global analysis of DNA methylation variation in adipose tissue from twins reveals links to disease-associated variants in distal regulatory elements. , 2013, American journal of human genetics.
[29] R. Knight,et al. Meta-analyses of studies of the human microbiota , 2013, Genome research.
[30] P. Bork,et al. Richness of human gut microbiome correlates with metabolic markers , 2013, Nature.
[31] Lucie Geurts,et al. Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity , 2013, Proceedings of the National Academy of Sciences.
[32] Ellen T. Gelfand,et al. The Genotype-Tissue Expression (GTEx) project , 2013, Nature Genetics.
[33] H. Goossens,et al. Differences in gut microbiota composition between obese and lean children: a cross-sectional study , 2013, Gut Pathogens.
[34] T. Spector,et al. The relationship between DXA-based and anthropometric measures of visceral fat and morbidity in women , 2013, BMC Cardiovascular Disorders.
[35] B. Stecher,et al. 'Blooming' in the gut: how dysbiosis might contribute to pathogen evolution , 2013, Nature Reviews Microbiology.
[36] Alireza Moayyeri,et al. COHORT PROFILE Cohort Profile : TwinsUK and Healthy Ageing Twin Study , 2013 .
[37] Francesco Marabita,et al. A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data , 2012, Bioinform..
[38] Hélène Touzet,et al. SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data , 2012, Bioinform..
[39] T. Spector,et al. Effects of age on genetic influence on bone loss over 17 years in women: The Healthy Ageing Twin Study (HATS) , 2012, Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research.
[40] R. Knight,et al. Diversity, stability and resilience of the human gut microbiota , 2012, Nature.
[41] J. Després,et al. Body Fat Distribution and Risk of Cardiovascular Disease: An Update , 2012, Circulation.
[42] Simon C. Potter,et al. Mapping cis- and trans-regulatory effects across multiple tissues in twins , 2012, Nature Genetics.
[43] E. Gamazon,et al. The regulatory effect of miRNAs is a heritable genetic trait in humans , 2012, BMC Genomics.
[44] D. Sinderen,et al. Gut microbiota composition correlates with diet and health in the elderly , 2012, Nature.
[45] D. Raoult,et al. Comparative meta-analysis of the effect of Lactobacillus species on weight gain in humans and animals. , 2012, Microbial pathogenesis.
[46] A. Macpherson,et al. Interactions Between the Microbiota and the Immune System , 2012, Science.
[47] M. Stephens,et al. Genome-wide Efficient Mixed Model Analysis for Association Studies , 2012, Nature Genetics.
[48] Katherine H. Huang,et al. Structure, Function and Diversity of the Healthy Human Microbiome , 2012, Nature.
[49] Anton J. Enright,et al. Extent, Causes, and Consequences of Small RNA Expression Variation in Human Adipose Tissue , 2012, PLoS genetics.
[50] R. Knight,et al. Responses of Gut Microbiota to Diet Composition and Weight Loss in Lean and Obese Mice , 2012, Obesity.
[51] William A. Walters,et al. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms , 2012, The ISME Journal.
[52] David L. Ergun,et al. Dual-Energy X-Ray Absorptiometry for Quantification of Visceral Fat , 2012, Obesity.
[53] Eric P. Nawrocki,et al. An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea , 2011, The ISME Journal.
[54] Andrey A. Shabalin,et al. Matrix eQTL: ultra fast eQTL analysis via large matrix operations , 2011, Bioinform..
[55] H. Tamemoto,et al. Association of subcutaneous and visceral fat mass with serum concentrations of adipokines in subjects with type 2 diabetes mellitus. , 2012, Endocrine journal.
[56] J. Sung,et al. Comparison of the Gut Microbiotas of Healthy Adult Twins Living in South Korea and the United States , 2011, Applied and Environmental Microbiology.
[57] R. Reimer,et al. Prebiotic fibres dose-dependently increase satiety hormones and alter Bacteroidetes and Firmicutes in lean and obese JCR:LA-cp rats , 2011, British Journal of Nutrition.
[58] M. Zimmermann,et al. The metabolic activity of gut microbiota in obese children is increased compared with normal-weight children and exhibits more exhaustive substrate utilization , 2011, Nutrition & Diabetes.
[59] Arthur Kaser,et al. Gut microbiome, obesity, and metabolic dysfunction. , 2011, The Journal of clinical investigation.
[60] Ashraf Shoeib,et al. Frequency of Firmicutes and Bacteroidetes in gut microbiota in obese and normal weight Egyptian children and adults , 2011, Archives of medical science : AMS.
[61] P. Bork,et al. Enterotypes of the human gut microbiome , 2011, Nature.
[62] Peer Bork,et al. Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy , 2011, Nucleic Acids Res..
[63] John Fox,et al. OpenMx: An Open Source Extended Structural Equation Modeling Framework , 2011, Psychometrika.
[64] Jesse R. Zaneveld,et al. Pan-genome of the dominant human gut-associated archaeon, Methanobrevibacter smithii, studied in twins , 2011, Proceedings of the National Academy of Sciences.
[65] Min Zhang,et al. Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors , 2010, Proceedings of the National Academy of Sciences.
[66] E. Murphy,et al. Composition and energy harvesting capacity of the gut microbiota: relationship to diet, obesity and time in mouse models , 2010, Gut.
[67] Robert C. Edgar,et al. BIOINFORMATICS APPLICATIONS NOTE , 2001 .
[68] C. Jobin,et al. High-Fat Diet: Bacteria Interactions Promote Intestinal Inflammation Which Precedes and Correlates with Obesity and Insulin Resistance in Mouse , 2010, PloS one.
[69] Tsun-Po Yang,et al. Genevar: a database and Java application for the analysis and visualization of SNP-gene associations in eQTL studies , 2010, Bioinform..
[70] Wolfgang Viechtbauer,et al. Conducting Meta-Analyses in R with the metafor Package , 2010 .
[71] K. Imaizumi,et al. Regulation of abdominal adiposity by probiotics (Lactobacillus gasseri SBT2055) in adults with obese tendencies in a randomized controlled trial , 2010, European Journal of Clinical Nutrition.
[72] J. Faith,et al. Dissecting the in Vivo Metabolic Potential of Two Human Gut Acetogens , 2010, The Journal of Biological Chemistry.
[73] Ming D. Li,et al. Genome-wide meta-analyses identify multiple loci associated with smoking behavior , 2010, Nature Genetics.
[74] William A. Walters,et al. QIIME allows analysis of high-throughput community sequencing data , 2010, Nature Methods.
[75] R. Ley,et al. Metabolic Syndrome and Altered Gut Microbiota in Mice Lacking Toll-Like Receptor 5 , 2010, Science.
[76] Robert G. Beiko,et al. Identifying biologically relevant differences between metagenomic communities , 2010, Bioinform..
[77] Youfang Cao,et al. Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice , 2010, The ISME Journal.
[78] F. Bushman,et al. QIIME allows integration and analysis of high-throughput community sequencing data. Nat. Meth. , 2010 .
[79] Skipper Seabold,et al. Statsmodels: Econometric and Statistical Modeling with Python , 2010, SciPy.
[80] R. Knight,et al. The Effect of Diet on the Human Gut Microbiome: A Metagenomic Analysis in Humanized Gnotobiotic Mice , 2009, Science Translational Medicine.
[81] Fabrice Armougom,et al. Monitoring Bacterial Community of Human Gut Microbiota Reveals an Increase in Lactobacillus in Obese Patients and Methanogens in Anorexic Patients , 2009, PloS one.
[82] P. Donnelly,et al. A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association Studies , 2009, PLoS genetics.
[83] James Versalovic,et al. Targeting the human microbiome with antibiotics, probiotics, and prebiotics: gastroenterology enters the metagenomics era. , 2009, Gastroenterology.
[84] B. Roe,et al. A core gut microbiome in obese and lean twins , 2008, Nature.
[85] S. O’Rahilly,et al. Human Obesity: A Heritable Neurobehavioral Disorder That Is Highly Sensitive to Environmental Conditions , 2008, Diabetes.
[86] A. Uitterlinden,et al. Sex-specific genetic effects influence variation in body composition , 2008, Diabetologia.
[87] J. Doré,et al. Molecular analysis of the digestive microbiota in a gnotobiotic mouse model during antibiotic treatment: Influence of Saccharomyces boulardii. , 2008, Anaerobe.
[88] Rustam I. Aminov,et al. Predominant Role of Host Genetics in Controlling the Composition of Gut Microbiota , 2008, PloS one.
[89] R. Knight,et al. Evolution of Mammals and Their Gut Microbes , 2008, Science.
[90] L. Fulton,et al. Diet-induced obesity is linked to marked but reversible alterations in the mouse distal gut microbiome. , 2008, Cell host & microbe.
[91] V. Somers,et al. Accuracy of body mass index in diagnosing obesity in the adult general population , 2008, International Journal of Obesity.
[92] J. Wardle,et al. Genetic and environmental determinants of children's food preferences , 2008, British Journal of Nutrition.
[93] J. Opitz,et al. Obesity: Genetic, molecular, and environmental aspects , 2007, American journal of medical genetics. Part A.
[94] T. Spector,et al. Dietary Patterns and Heritability of Food Choice in a UK Female Twin Cohort , 2007, Twin Research and Human Genetics.
[95] T. Spector,et al. Linkage of genes to total lean body mass in normal women. , 2007, Journal of Clinical Endocrinology and Metabolism.
[96] Udo Hoffmann,et al. Abdominal Visceral and Subcutaneous Adipose Tissue Compartments: Association With Metabolic Risk Factors in the Framingham Heart Study , 2007, Circulation.
[97] Philipp E. Scherer,et al. Visceral Fat Adipokine Secretion Is Associated With Systemic Inflammation in Obese Humans , 2007, Diabetes.
[98] Jiang He,et al. Genetic epidemiology of obesity. , 2007, Epidemiologic reviews.
[99] P. Turnbaugh,et al. Microbial ecology: Human gut microbes associated with obesity , 2006, Nature.
[100] E. Mardis,et al. An obesity-associated gut microbiome with increased capacity for energy harvest , 2006, Nature.
[101] C. Block,et al. Mechanisms linking obesity with cardiovascular disease , 2006, Nature.
[102] Eugene V Koonin,et al. Evolution of glyoxylate cycle enzymes in Metazoa: evidence of multiple horizontal transfer events and pseudogene formation , 2006, Biology Direct.
[103] Paul Poirier,et al. Obesity and Cardiovascular Disease: Pathophysiology, Evaluation, and Effect of Weight Loss: An Update of the 1997 American Heart Association Scientific Statement on Obesity and Heart Disease From the Obesity Committee of the Council on Nutrition, Physical Activity, and Metabolism , 2006, Circulation.
[104] Y. Pekarsky,et al. A mouse model of the fragile gene FHIT: From carcinogenesis to gene therapy and cancer prevention. , 2005, Mutation research.
[105] F. Bäckhed,et al. Obesity alters gut microbial ecology. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[106] Michel Galinier,et al. Uncomplicated human obesity is associated with a specific cardiac transcriptome: involvement of the Wnt pathway , 2004, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[107] Johan Trygg,et al. The PLS method -- partial least squares projections to latent structures -- and its applications in industrial RDP (research, development, and production) , 2004 .
[108] J. Cauley,et al. The prediction of visceral fat by dual-energy X-ray absorptiometry in the elderly: a comparison with computed tomography and anthropometry , 2002, International Journal of Obesity.
[109] S. Thompson,et al. Quantifying heterogeneity in a meta‐analysis , 2002, Statistics in medicine.
[110] J. Gordon,et al. How host-microbial interactions shape the nutrient environment of the mammalian intestine. , 2002, Annual review of nutrition.
[111] Willem M. de Vos,et al. The Host Genotype Affects the Bacterial Community in the Human Gastrointestinal Tract , 2001 .
[112] B. Wajchenberg. Subcutaneous and visceral adipose tissue: their relation to the metabolic syndrome. , 2000, Endocrine reviews.
[113] S. Song. Can the glyoxylate pathway contribute to fat-induced hepatic insulin resistance? , 2000, Medical hypotheses.
[114] E. Bertin,et al. Measurement of visceral adipose tissue by DXA combined with anthropometry in obese humans , 2000, International Journal of Obesity.
[115] C. Bouchard,et al. Familial resemblance for body composition measures: the HERITAGE Family Study. , 1997, Obesity research.
[116] J. Després,et al. Segregation analysis of abdominal visceral fat: the HERITAGE Family Study. , 1997, Obesity research.
[117] M. Neale,et al. Genetic and Environmental Factors in Relative Body Weight and Human Adiposity , 1997, Behavior genetics.
[118] T. Spector,et al. Independent genetic factors determine the amount and distribution of fat in women after the menopause. , 1997, The Journal of clinical endocrinology and metabolism.
[119] J. Kaprio,et al. The heritability of body mass index among an international sample of monozygotic twins reared apart. , 1996, International journal of obesity and related metabolic disorders : journal of the International Association for the Study of Obesity.
[120] C. Croce,et al. The FHIT Gene, Spanning the Chromosome 3p14.2 Fragile Site and Renal Carcinoma–Associated t(3;8) Breakpoint, Is Abnormal in Digestive Tract Cancers , 1996, Cell.
[121] Y. Matsuzawa,et al. Visceral fat accumulation and cardiovascular disease. , 1995, Obesity research.
[122] Y. Benjamini,et al. Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .
[123] L. Bartoshuk,et al. Children's food preferences and genetic sensitivity to the bitter taste of 6-n-propylthiouracil (PROP). , 1991, The American journal of clinical nutrition.
[124] J. Mayer,et al. Studies of pyruvate and acetate metabolism in the hereditary obesity-diabetes syndrome of mice. , 1952, The Journal of biological chemistry.