SARS-CoV-2 infection in nonhuman primates alters the composition and functional activity of the gut microbiota
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H. Sokol | V. Contreras | S. van der Werf | L. Humbert | D. Rainteau | Nathalie Rolhion | F. Trottein | R. Le Grand | Arnaud Machelart | E. Menu | S. Ferreira | N. Dereuddre-Bosquet | A. Desmons | Raphaël Ho Tsong Fang | P. Maisonnasse | L. Brot | Emilie Gauliard | V. Sencio | B. Delache | Angela Brisebarre | C. Wahl | Cyriane Oeuvray | Valentin Sencio | Séverine Heumel | A. Lamazière | Lucie Deryuter | S. Heumel
[1] K. Chow,et al. Gut microbiota composition reflects disease severity and dysfunctional immune responses in patients with COVID-19 , 2021, Gut.
[2] Steven M. Holland,et al. Autoantibodies against type I IFNs in patients with life-threatening COVID-19 , 2020, Science.
[3] Jacques Fellay,et al. Inborn errors of type I IFN immunity in patients with life-threatening COVID-19 , 2020, Science.
[4] Lisa E. Gralinski,et al. Animal models for COVID-19 , 2020, Nature.
[5] P. Scherer,et al. Obesity and diabetes as comorbidities for COVID-19: Underlying mechanisms and the role of viral–bacterial interactions , 2020, eLife.
[6] X. de Lamballerie,et al. Hydroxychloroquine use against SARS-CoV-2 infection in non-human primates , 2020, Nature.
[7] Zigui Chen,et al. Depicting SARS-CoV-2 faecal viral activity in association with gut microbiota composition in patients with COVID-19 , 2020, Gut.
[8] Angelo Carfì,et al. Persistent Symptoms in Patients After Acute COVID-19. , 2020, JAMA.
[9] Chuan Qin,et al. Primary exposure to SARS-CoV-2 protects against reinfection in rhesus macaques , 2020, Science.
[10] H. Sokol,et al. Potential Causes and Consequences of Gastrointestinal Disorders during a SARS-CoV-2 Infection , 2020, Cell Reports.
[11] S. Ng,et al. Alterations in Fecal Fungal Microbiome of Patients With COVID-19 During Time of Hospitalization until Discharge , 2020, Gastroenterology.
[12] Y. Shah,et al. Oxygen battle in the gut: Hypoxia and hypoxia-inducible factors in metabolic and inflammatory responses in the intestine , 2020, The Journal of Biological Chemistry.
[13] Lanjuan Li,et al. Alterations of the Gut Microbiota in Patients with COVID-19 or H1N1 Influenza , 2020, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.
[14] P. Sorger,et al. SARS-CoV-2 infection protects against rechallenge in rhesus macaques , 2020, Science.
[15] J. Vaupel,et al. National age and coresidence patterns shape COVID-19 vulnerability , 2020, Proceedings of the National Academy of Sciences.
[16] O. Tsang,et al. Infection of bat and human intestinal organoids by SARS-CoV-2 , 2020, Nature Medicine.
[17] S. Ng,et al. Manifestations and prognosis of gastrointestinal and liver involvement in patients with COVID-19: a systematic review and meta-analysis , 2020, The Lancet Gastroenterology & Hepatology.
[18] E. Fischer,et al. Respiratory disease in rhesus macaques inoculated with SARS-CoV-2 , 2020, Nature.
[19] Chen Liu,et al. Influenza infection elicits an expansion of gut population of endogenous Bifidobacterium animalis which protects mice against infection , 2020, Genome Biology.
[20] Fengzhe Xu,et al. Gut microbiota may underlie the predisposition of healthy individuals to COVID-19 , 2020, medRxiv.
[21] Hans Clevers,et al. SARS-CoV-2 productively infects human gut enterocytes , 2020, Science.
[22] T. Kuiken,et al. Comparative pathogenesis of COVID-19, MERS, and SARS in a nonhuman primate model , 2020, Science.
[23] Y. Yazdanpanah,et al. Characterization and Treatment of SARS-CoV-2 in Nasal and Bronchial Human Airway Epithelia , 2020, bioRxiv.
[24] Xavier Duval,et al. Clinical and virological data of the first cases of COVID-19 in Europe: a case series , 2020, The Lancet Infectious Diseases.
[25] P. Adab,et al. Covid-19: risk factors for severe disease and death , 2020, BMJ.
[26] Ke Ma,et al. Clinical characteristics of 113 deceased patients with coronavirus disease 2019: retrospective study , 2020, BMJ.
[27] Rui Ji,et al. Prevalence of comorbidities and its effects in patients infected with SARS-CoV-2: a systematic review and meta-analysis , 2020, International Journal of Infectious Diseases.
[28] Hong Jiang,et al. Immunodepletion with Hypoxemia: A Potential High Risk Subtype of Coronavirus Disease 2019 , 2020, medRxiv.
[29] Qiurong Ruan,et al. Clinical predictors of mortality due to COVID-19 based on an analysis of data of 150 patients from Wuhan, China , 2020, Intensive Care Medicine.
[30] G. Milligan,et al. Gut Dysbiosis during Influenza Contributes to Pulmonary Pneumococcal Superinfection through Altered Short-Chain Fatty Acid Production. , 2020, Cell reports.
[31] J. Xiang,et al. Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study , 2020, The Lancet.
[32] K. Yuen,et al. Clinical Characteristics of Coronavirus Disease 2019 in China , 2020, The New England journal of medicine.
[33] H. Shan,et al. Evidence for Gastrointestinal Infection of SARS-CoV-2 , 2020, Gastroenterology.
[34] H. Sokol,et al. Gut microbiota-derived metabolites as key actors in inflammatory bowel disease , 2020, Nature Reviews Gastroenterology & Hepatology.
[35] G. Gao,et al. A Novel Coronavirus from Patients with Pneumonia in China, 2019 , 2020, The New England journal of medicine.
[36] Y. Hu,et al. Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China , 2020, The Lancet.
[37] S. Devkota,et al. The gut microbiome and metabolic syndrome. , 2019, The Journal of clinical investigation.
[38] William A. Walters,et al. Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 , 2019, Nature Biotechnology.
[39] H. Sokol,et al. Validation of a global quantitative analysis methodology of tryptophan metabolites in mice using LC-MS. , 2019, Talanta.
[40] B. Helmink,et al. The microbiome, cancer, and cancer therapy , 2019, Nature Medicine.
[41] Jun Yu,et al. Diversity of macaque microbiota compared to the human counterparts , 2018, Scientific Reports.
[42] T. R. Licht,et al. Microbial tryptophan catabolites in health and disease , 2018, Nature Communications.
[43] Lei Yu,et al. Metagenomic comparison of the rectal microbiota between rhesus macaques (Macaca mulatta) and cynomolgus macaques (Macaca fascicularis) , 2018, Zoological research.
[44] Harry Sokol,et al. Gut Microbiota Regulation of Tryptophan Metabolism in Health and Disease. , 2018, Cell host & microbe.
[45] Weston R. Whitaker,et al. Gut Microbiota-Produced Tryptamine Activates an Epithelial G-Protein-Coupled Receptor to Increase Colonic Secretion. , 2018, Cell host & microbe.
[46] M. Moffatt,et al. Respiratory Disease following Viral Lung Infection Alters the Murine Gut Microbiota , 2018, Front. Immunol..
[47] A. Molinaro,et al. Role of Bile Acids in Metabolic Control , 2018, Trends in Endocrinology & Metabolism.
[48] M. Schmolke,et al. Influenza A virus infection impacts systemic microbiota dynamics and causes quantitative enteric dysbiosis , 2018, Microbiome.
[49] G. Weinstock,et al. Impact of Age, Caloric Restriction, and Influenza Infection on Mouse Gut Microbiome: An Exploratory Study of the Role of Age-Related Microbiome Changes on Influenza Responses , 2017, Front. Immunol..
[50] D. Artis,et al. Regulation of inflammation by microbiota interactions with the host , 2017, Nature Immunology.
[51] C. Mackay,et al. Metabolite-Sensing G Protein-Coupled Receptors-Facilitators of Diet-Related Immune Regulation. , 2017, Annual review of immunology.
[52] R. Xavier,et al. CARD9 impacts colitis by altering gut microbiota metabolism of tryptophan into aryl hydrocarbon receptor ligands , 2016, Nature Medicine.
[53] G. Cheng,et al. Influenza Virus Affects Intestinal Microbiota and Secondary Salmonella Infection in the Gut through Type I Interferons , 2016, PLoS pathogens.
[54] S. Ehrlich,et al. Influence of H7N9 virus infection and associated treatment on human gut microbiota , 2015, Scientific Reports.
[55] R. Sun,et al. Respiratory influenza virus infection induces intestinal immune injury via microbiota-mediated Th17 cell–dependent inflammation , 2014, The Journal of experimental medicine.
[56] S. Zeisel,et al. A targeted metabolomic protocol for short-chain fatty acids and branched-chain amino acids , 2013, Metabolomics.
[57] Susan Holmes,et al. phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data , 2013, PloS one.
[58] Pelin Yilmaz,et al. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools , 2012, Nucleic Acids Res..
[59] Curtis Huttenhower,et al. Microbial Co-occurrence Relationships in the Human Microbiome , 2012, PLoS Comput. Biol..
[60] G. Trugnan,et al. Bile acid profiling in human biological samples: comparison of extraction procedures and application to normal and cholestatic patients. , 2012, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.
[61] C. Huttenhower,et al. Metagenomic biomarker discovery and explanation , 2011, Genome Biology.
[62] F. Bushman,et al. The Macaque Gut Microbiome in Health, Lentiviral Infection, and Chronic Enterocolitis , 2008, PLoS pathogens.
[63] M. Gershon,et al. Physiological responses of guinea-pig myenteric neurons secondary to the release of endogenous serotonin by tryptamine , 1985, Neuroscience.