The Two-Component Regulators GacS and GacA Influence Accumulation of the Stationary-Phase Sigma Factor ςS and the Stress Response in Pseudomonas fluorescensPf-5

ABSTRACT Three global regulators are known to control antibiotic production by Pseudomonas fluorescens. A two-component regulatory system comprised of the sensor kinase GacS (previously called ApdA or LemA) and GacA, a member of the FixJ family of response regulators, is required for antibiotic production. A mutation inrpoS, which encodes the stationary-phase sigma factor ςS, differentially affects antibiotic production and reduces the capacity of stationary-phase cells of P. fluorescens to survive exposure to oxidative stress. ThegacA gene of P. fluorescens Pf-5 was isolated, and the influence of gacS and gacA onrpoS transcription, ςS levels, and oxidative stress response of Pf-5 was determined. We selected a gacAmutant of Pf-5 that contained a single nucleotide substitution within a predicted α-helical region, which is highly conserved among the FixJ family of response regulators. At the entrance to stationary phase, ςS content in gacS and gacAmutants of Pf-5 was less than 20% of the wild-type level. Transcription of rpoS, assessed with anrpoS-lacZ transcriptional fusion, was positively influenced by GacS and GacA, an effect that was most evident at the transition between exponential growth and stationary phase. Mutations ingacS and gacA compromised the capacity of stationary-phase cells of Pf-5 to survive exposure to oxidative stress. The results of this study provide evidence for the predominant roles of GacS and GacA in the regulatory cascade controlling stress response and antifungal metabolite production in P. fluorescens.

[1]  D. K. Willis,et al.  A newly identified regulator is required for virulence and toxin production in Pseudomonas syringae , 1998, Molecular microbiology.

[2]  S. Gottesman,et al.  Regulation of Proteolysis of the Stationary-Phase Sigma Factor RpoS , 1998, Journal of bacteriology.

[3]  C. Reimmann,et al.  The global activator GacA of Pseudomonas aeruginosa PAO positively controls the production of the autoinducer N‐butyryl‐homoserine lactone and the formation of the virulence factors pyocyanin, cyanide, and lipase , 1997, Molecular microbiology.

[4]  G. Stacey,et al.  Plant-Microbe Interactions , 1996, Plant-Microbe Interactions.

[5]  R. Hengge-aronis,et al.  Back to log phase: σS as a global regulator in the osmotic control of gene expression in Escherichia coli , 1996, Molecular microbiology.

[6]  K. Tanaka,et al.  A hierarchical quorum‐sensing cascade in Pseudomonas aeruginosa links the transcriptional activators LasR and RhIR (VsmR) to expression of the stationary‐phase sigma factor RpoS , 1996, Molecular microbiology.

[7]  F. Pedersen,et al.  Increased cloning efficiency by temperature-cycle ligation. , 1996, Nucleic acids research.

[8]  L. Thomashow,et al.  Current Concepts in the Use of Introduced Bacteria for Biological Disease Control: Mechanisms and Antifungal Metabolites , 1996 .

[9]  A. Sarniguet,et al.  The sigma factor sigma s affects antibiotic production and biological control activity of Pseudomonas fluorescens Pf-5. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[10]  J. Loper,et al.  A global regulator of secondary metabolite production in Pseudomonas fluorescens Pf-5 , 1995, Journal of bacteriology.

[11]  J. Loper,et al.  Characterization of a Genomic Region Required for Production of the Antibiotic Pyoluteorin by the Biological Control Agent Pseudomonas fluorescens Pf-5 , 1995, Applied and environmental microbiology.

[12]  Takahashi Hideo,et al.  Cloning, analysis and expression of an rpoS homologue gene from Pseudomonas aeruginosa PAO1 , 1994 .

[13]  S. Gould,et al.  PRODUCTION OF 2, 4-DIACETYLPHLOROGLUCINOL BY THE BIOCONTROL AGENT PSEUDOMONAS FLUORESCENS PF-5 , 1994 .

[14]  D. K. Willis,et al.  Genetic evidence that the gacA gene encodes the cognate response regulator for the lemA sensor in Pseudomonas syringae , 1994, Journal of bacteriology.

[15]  S. Stibitz Mutations in the bvgA gene of Bordetella pertussis that differentially affect regulation of virulence determinants , 1994, Journal of bacteriology.

[16]  F. Fang,et al.  RpoS is necessary for both the positive and negative regulation of starvation survival genes during phosphate, carbon, and nitrogen starvation in Salmonella typhimurium , 1994, Journal of bacteriology.

[17]  S. Hill,et al.  Global regulation of expression of antifungal factors by a Pseudomonas fluorescens biological control strain. , 1994, Molecular plant-microbe interactions : MPMI.

[18]  R. Hengge-aronis,et al.  The cellular concentration of the sigma S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability. , 1994, Genes & development.

[19]  K. Tanaka,et al.  Cloning, analysis and expression of an rpoS homologue gene from Pseudomonas aeruginosa PAO1. , 1994, Gene.

[20]  R. Hengge-aronis,et al.  The role of the sigma factor sigma S (KatF) in bacterial global regulation. , 1994, Annual review of microbiology.

[21]  D A Siegele,et al.  Microbial competition: Escherichia coli mutants that take over stationary phase cultures. , 1993, Science.

[22]  J. Loper,et al.  A genomic region from Pseudomonas fluorescens Pf-5 required for pyrrolnitrin production and inhibition of Pyrenophora tritici-repentis in wheat straw. , 1993 .

[23]  A. Eisenstark,et al.  DNA base sequence variability in katF (putative sigma factor) gene of Escherichia coli. , 1992, Nucleic acids research.

[24]  M. Gribskov,et al.  The sigma 70 family: sequence conservation and evolutionary relationships , 1992, Journal of bacteriology.

[25]  C. Keel,et al.  Global control in Pseudomonas fluorescens mediating antibiotic synthesis and suppression of black root rot of tobacco. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[26]  J. Loper,et al.  Lack of evidence for a role of antifungal metabolite production by Pseudomonas fluorescens Pf-5 in biological control of Pythium damping-off of cucumber , 1992 .

[27]  A. Matin,et al.  The putative sigma factor KatF has a central role in development of starvation-mediated general resistance in Escherichia coli , 1991, Journal of bacteriology.

[28]  D. Kahn,et al.  Modular structure of Fix J: homology of the transcriptional activator domain with the ‐35 binding domain of sigma factors , 1991, Molecular microbiology.

[29]  D. Kahn,et al.  Modular structure of FixJ: homology of the transcriptional activator domain with the -35 binding domain of sigma factors. , 1991, Molecular microbiology.

[30]  V. de Lorenzo,et al.  Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria , 1990, Journal of bacteriology.

[31]  D. Touati,et al.  Exonuclease III and the catalase hydroperoxidase II in Escherichia coli are both regulated by the katF gene product. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[32]  D. Kahn,et al.  Rhizobium meliloti regulatory gene fixJ activates transcription of R. meliloti nifA and fixK genes in Escherichia coli , 1989, Journal of bacteriology.

[33]  D. Kobayashi,et al.  Improved broad-host-range plasmids for DNA cloning in gram-negative bacteria. , 1988, Gene.

[34]  L. Fang,et al.  Rapid automated synthesis via diisopropyl phosphoramidite in situ activation. Chemical synthesis and cloning of a calmodulin gene. , 1986, Biochemistry and cell biology = Biochimie et biologie cellulaire.

[35]  J. Devereux,et al.  A comprehensive set of sequence analysis programs for the VAX , 1984, Nucleic Acids Res..

[36]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[37]  C. R. Howell Suppression of Pythium ultimum-induced damping-off of cotton seedlings by Pseudomonas fluorescens and its antibiotic, pyoluteorin. , 1980 .

[38]  J. Gergen,et al.  Filter replicas and permanent collections of recombinant DNA plasmids. , 1979, Nucleic acids research.

[39]  S. Narumiya,et al.  A new metabolic pathway of tryptophan initiated by tryptophan side chain oxidase. , 1979, The Journal of biological chemistry.

[40]  D. Helinski,et al.  Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans. , 1979, Proceedings of the National Academy of Sciences of the United States of America.

[41]  C. R. Howell Control of rhizoctonia solani on cotton seedlings with Pseudomonas fluorescens and with an antibiotic produced by the bacterium. , 1979 .

[42]  P. Y. Chou,et al.  Prediction of the secondary structure of proteins from their amino acid sequence. , 2006 .

[43]  J. Garnier,et al.  Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. , 1978, Journal of molecular biology.

[44]  Jeffrey H. Miller Experiments in molecular genetics , 1972 .

[45]  G. G. Guilbault,et al.  Ultra Sensitive, Specific Method for Cyanide Using p-Nitrobenzaldehyde and o-Dinitrobenzene. , 1966 .

[46]  King Eo,et al.  Two simple media for the demonstration of pyocyanin and fluorescin. , 1954 .

[47]  E. King,et al.  Two simple media for the demonstration of pyocyanin and fluorescin. , 1954, The Journal of laboratory and clinical medicine.