Network analysis of the metabolome and transcriptome reveals novel regulation of potato pigmentation
暂无分享,去创建一个
M. Nam | S. Hong | Kyoungwon Cho | Kwang-Soo Cho | H. Sohn | Hyerim Lee | Kyoungwon Cho | Kwang-Soo Cho | In Jin Ha | Young-Mi Kim
[1] A. Allan,et al. Comparative Transcriptome Analysis of White and Purple Potato to Identify Genes Involved in Anthocyanin Biosynthesis , 2015, PloS one.
[2] A. R. L. Piero. The State of the Art in Biosynthesis of Anthocyanins and Its Regulation in Pigmented Sweet Oranges [(Citrus sinensis) L. Osbeck]. , 2015 .
[3] D. Xie,et al. Regulation of anthocyanin biosynthesis in Arabidopsis thaliana red pap1-D cells metabolically programmed by auxins , 2013, Planta.
[4] K. Stowell,et al. Metabolite profiling and quantification of phytochemicals in potato extracts using ultra-high-performance liquid chromatography-mass spectrometry. , 2013, Journal of the science of food and agriculture.
[5] Hong Gil Nam,et al. Plant leaf senescence and death – regulation by multiple layers of control and implications for aging in general , 2013, Journal of Cell Science.
[6] L. Jaakola,et al. New insights into the regulation of anthocyanin biosynthesis in fruits. , 2013, Trends in plant science.
[7] A. Baudry,et al. Regulation of flavonoid biosynthesis involves an unexpected complex transcriptional regulation of TT8 expression, in Arabidopsis. , 2013, The New phytologist.
[8] I. Baldwin,et al. Jasmonoyl-L-isoleucine hydrolase 1 (JIH1) regulates jasmonoyl-L-isoleucine levels and attenuates plant defenses against herbivores. , 2012, The Plant journal : for cell and molecular biology.
[9] Li-Wei Chiu,et al. Characterization of the regulatory network of BoMYB2 in controlling anthocyanin biosynthesis in purple cauliflower , 2012, Planta.
[10] Pei Chen,et al. Study of the mass spectrometric behaviors of anthocyanins in negative ionization mode and its applications for characterization of anthocyanins and non-anthocyanin polyphenols. , 2012, Rapid communications in mass spectrometry : RCM.
[11] Yoshikazu Tanaka,et al. Functional analysis of Antirrhinum kelloggii flavonoid 3′-hydroxylase and flavonoid 3′,5′-hydroxylase genes; critical role in flower color and evolution in the genus Antirrhinum , 2012, Journal of Plant Research.
[12] Ralf Tautenhahn,et al. Meta-analysis of untargeted metabolomic data from multiple profiling experiments , 2012, Nature Protocols.
[13] David M. A. Martin,et al. Genome sequence and analysis of the tuber crop potato , 2011, Nature.
[14] Pei Chen,et al. LC-PDA-ESI/MS(n) identification of new anthocyanins in purple Bordeaux radish ( Raphanus sativus L. variety). , 2011, Journal of agricultural and food chemistry.
[15] W. Peng,et al. The Jasmonate-ZIM-Domain Proteins Interact with the WD-Repeat/bHLH/MYB Complexes to Regulate Jasmonate-Mediated Anthocyanin Accumulation and Trichome Initiation in Arabidopsis thaliana[C][W] , 2011, Plant Cell.
[16] Fei He,et al. Biosynthesis of Anthocyanins and Their Regulation in Colored Grapes , 2010, Molecules.
[17] G. Choi,et al. Ethylene Suppression of Sugar-Induced Anthocyanin Pigmentation in Arabidopsis1[C][W][OA] , 2010, Plant Physiology.
[18] W. Huber,et al. which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets , 2011 .
[19] M. Giusti,et al. Anthocyanins: natural colorants with health-promoting properties. , 2010, Annual review of food science and technology.
[20] L. Ducreux,et al. Flavonoid profiling and transcriptome analysis reveals new gene–metabolite correlations in tubers of Solanum tuberosum L. , 2010, Journal of experimental botany.
[21] G. C. Yencho,et al. Characterization of anthocyanins and anthocyanidins in purple-fleshed sweetpotatoes by HPLC-DAD/ESI-MS/MS. , 2010, Journal of agricultural and food chemistry.
[22] 박선영. 미국과 한국의 정신장애인 가족의 자조집단에 대한 고찰 , 2009 .
[23] Cole Trapnell,et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.
[24] Catherine Deborde,et al. Gene and Metabolite Regulatory Network Analysis of Early Developing Fruit Tissues Highlights New Candidate Genes for the Control of Tomato Fruit Composition and Development1[C][W][OA] , 2009, Plant Physiology.
[25] Shoshi Kikuchi,et al. Integrated transcriptomics, proteomics, and metabolomics analyses to survey ozone responses in the leaves of rice seedling. , 2008, Journal of proteome research.
[26] Rodrigo A Gutiérrez,et al. Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1 , 2008, Proceedings of the National Academy of Sciences.
[27] Rainer Hoefgen,et al. Metabolomics integrated with transcriptomics: assessing systems response to sulfur-deficiency stress. , 2007, Physiologia plantarum.
[28] Bryan C Thines,et al. JAZ repressor proteins are targets of the SCFCOI1 complex during jasmonate signalling , 2007, Nature.
[29] M. Hirai,et al. Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis , 2007, Proceedings of the National Academy of Sciences.
[30] N. Amornsiripanitch,et al. A Genomic Approach to Identify Regulatory Nodes in the Transcriptional Network of Systemic Acquired Resistance in Plants , 2006, PLoS pathogens.
[31] H. Goodman,et al. MAX1, a regulator of the flavonoid pathway, controls vegetative axillary bud outgrowth in Arabidopsis. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[32] G. Martin,et al. Transcriptome and Selected Metabolite Analyses Reveal Multiple Points of Ethylene Control during Tomato Fruit Developmentw⃞ , 2005, The Plant Cell Online.
[33] Staffan Persson,et al. Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[34] R. Prior,et al. Systematic identification and characterization of anthocyanins by HPLC-ESI-MS/MS in common foods in the United States: fruits and berries. , 2005, Journal of agricultural and food chemistry.
[35] M. Hirai,et al. Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[36] J. Raynal,et al. Exogenous ethylene stimulates the long-term expression of genes related to anthocyanin biosynthesis in grape berries , 2003 .
[37] J. Selbig,et al. Parallel analysis of transcript and metabolic profiles: a new approach in systems biology , 2003, EMBO reports.
[38] A. R. Lo Piero. The State of the Art in Biosynthesis of Anthocyanins and Its Regulation in Pigmented Sweet Oranges [(Citrus sinensis) L. Osbeck]. , 2015, Journal of agricultural and food chemistry.
[39] L. Lepiniec,et al. Identification and characterization of MYB-bHLH-WD40 regulatory complexes controlling proanthocyanidin biosynthesis in strawberry (Fragaria × ananassa) fruits. , 2013, The New phytologist.
[40] D. Xie,et al. Modified bimolecular fluorescence complementation assay to study the inhibition of transcription complex formation by JAZ proteins. , 2013, Methods in molecular biology.
[41] Choung MyoungGun,et al. A new potato cultivar "Hongyoung", with red skin and flesh color, and high concentrations of anthocyanins. , 2009 .
[42] Cho HyunMook,et al. A new potato cultivar "Jayoung", with high concentration of anthocyanin. , 2009 .
[43] Brad T. Sherman,et al. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources , 2008, Nature Protocols.
[44] M. Hirai,et al. Decoding genes with coexpression networks and metabolomics - 'majority report by precogs'. , 2008, Trends in plant science.