Inevitability of the emergence and persistence of genetic parasites caused by evolutionary instability of parasite-free states
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[1] E. Koonin,et al. Evolutionary Genomics of Defense Systems in Archaea and Bacteria. , 2017, Annual review of microbiology.
[2] E. Koonin,et al. Disentangling the effects of selection and loss bias on gene dynamics , 2017, Proceedings of the National Academy of Sciences.
[3] E. Koonin,et al. Reconstruction of the evolution of microbial defense systems , 2017, BMC Evolutionary Biology.
[4] E. Koonin. Evolution of RNA- and DNA-guided antivirus defense systems in prokaryotes and eukaryotes: common ancestry vs convergence , 2017, Biology Direct.
[5] Kira S. Makarova,et al. Diversity and evolution of class 2 CRISPR–Cas systems , 2017, Nature Reviews Microbiology.
[6] G. Hartmann. Nucleic Acid Immunity , 2016, Advances in Immunology.
[7] E. Koonin,et al. Coupling immunity and programmed cell suicide in prokaryotes: Life‐or‐death choices , 2016, BioEssays : news and reviews in molecular, cellular and developmental biology.
[8] E. Koonin,et al. Are viruses alive? The replicator paradigm sheds decisive light on an old but misguided question. , 2016, Studies in history and philosophy of biological and biomedical sciences.
[9] E. Koonin. Viruses and mobile elements as drivers of evolutionary transitions , 2016, Philosophical Transactions of the Royal Society B: Biological Sciences.
[10] E. Koonin,et al. Inevitability of Genetic Parasites , 2016, Genome biology and evolution.
[11] J. Geiger,et al. A model for genesis of transcription systems , 2016, Transcription.
[12] Mike Boots,et al. Parasite Exposure Drives Selective Evolution of Constitutive versus Inducible Defense , 2015, Current Biology.
[13] E. Koonin,et al. Classification of prokaryotic genetic replicators: between selfishness and altruism , 2015, Annals of the New York Academy of Sciences.
[14] Matthew B. Sullivan,et al. Rising to the challenge: accelerated pace of discovery transforms marine virology , 2015, Nature Reviews Microbiology.
[15] B. Zagrovic,et al. Absolute binding-free energies between standard RNA/DNA nucleobases and amino-acid sidechain analogs in different environments , 2014, Nucleic acids research.
[16] E. Koonin,et al. Evolution of adaptive immunity from transposable elements combined with innate immune systems , 2014, Nature Reviews Genetics.
[17] N. Moran,et al. The tiniest tiny genomes. , 2014, Annual review of microbiology.
[18] E. Koonin,et al. Genomes in turmoil: quantification of genome dynamics in prokaryote supergenomes , 2014, BMC Biology.
[19] Eugene V. Koonin,et al. Virus World as an Evolutionary Network of Viruses and Capsidless Selfish Elements , 2014, Microbiology and Molecular Reviews.
[20] N. Friedman,et al. Do all creatures possess an acquired immune system of some sort? , 2014, BioEssays : news and reviews in molecular, cellular and developmental biology.
[21] E. Koonin,et al. Horizontal Gene Transfer Can Rescue Prokaryotes from Muller’s Ratchet: Benefit of DNA from Dead Cells and Population Subdivision , 2013, G3: Genes, Genomes, Genetics.
[22] M. Sullivan,et al. The global virome: not as big as we thought? , 2013, Current opinion in virology.
[23] Sylvain Moineau,et al. Revenge of the phages: defeating bacterial defences , 2013, Nature Reviews Microbiology.
[24] B. Zagrovic,et al. Evidence of direct complementary interactions between messenger RNAs and their cognate proteins , 2013, Nucleic acids research.
[25] E. Koonin,et al. A virocentric perspective on the evolution of life , 2013, Current Opinion in Virology.
[26] Kira S. Makarova,et al. Comparative genomics of defense systems in archaea and bacteria , 2013, Nucleic acids research.
[27] D. Mager,et al. Transposable elements: an abundant and natural source of regulatory sequences for host genes. , 2012, Annual review of genetics.
[28] Eugene V. Koonin,et al. Evolution of microbes and viruses: a paradigm shift in evolutionary biology? , 2012, Front. Cell. Inf. Microbio..
[29] Paulien Hogeweg,et al. Evolutionary dynamics of RNA-like replicator systems: A bioinformatic approach to the origin of life. , 2012, Physics of life reviews.
[30] M. Hlevnjak,et al. Sequence signatures of direct complementarity between mRNAs and cognate proteins on multiple levels , 2012, Nucleic acids research.
[31] E. Koonin,et al. Systems biology of bacteriophage proteins and new dimensions of the virus world discovered through metagenomics , 2011, Genome Biology.
[32] E. Koonin. The Logic of Chance: The Nature and Origin of Biological Evolution , 2011 .
[33] Paulien Hogeweg,et al. On the Origin of DNA Genomes: Evolution of the Division of Labor between Template and Catalyst in Model Replicator Systems , 2011, PLoS Comput. Biol..
[34] Adi Stern,et al. The phage‐host arms race: Shaping the evolution of microbes , 2011, BioEssays : news and reviews in molecular, cellular and developmental biology.
[35] Adi Stern,et al. Self-targeting by CRISPR: gene regulation or autoimmunity? , 2010, Trends in genetics : TIG.
[36] Sylvain Moineau,et al. Bacteriophage resistance mechanisms , 2010, Nature Reviews Microbiology.
[37] P. Forterre,et al. The Great Billion‐year War between Ribosome‐ and Capsid‐encoding Organisms (Cells and Viruses) as the Major Source of Evolutionary Novelties , 2009, Annals of the New York Academy of Sciences.
[38] V. Pande,et al. On the application of statistical physics to evolutionary biology. , 2009, Journal of theoretical biology.
[39] Eugene V Koonin,et al. Origin and evolution of the genetic code: The universal enigma , 2008, IUBMB life.
[40] Paulien Hogeweg,et al. Evolution of complexity in RNA-like replicator systems , 2008, Biology Direct.
[41] John Stache,et al. Demons , Engines and the Second Law , 2008 .
[42] C. Suttle. Marine viruses — major players in the global ecosystem , 2007, Nature Reviews Microbiology.
[43] I. K. Jordan,et al. Exaptation of protein coding sequences from transposable elements. , 2007, Genome dynamics.
[44] M. Nowak. Evolutionary Dynamics: Exploring the Equations of Life , 2006 .
[45] M. C. Urban,et al. Evolving metacommunities: toward an evolutionary perspective on metacommunities. , 2006, Ecology.
[46] C. Suttle. Viruses in the sea , 2005, Nature.
[47] Manfred Eigen,et al. The error threshold. , 2005, Virus research.
[48] M. Eigen. Selforganization of matter and the evolution of biological macromolecules , 1971, Naturwissenschaften.
[49] Forest Rohwer,et al. Global Phage Diversity , 2003, Cell.
[50] M. Tribus,et al. Probability theory: the logic of science , 2003 .
[51] G. Glazko,et al. Origin of a substantial fraction of human regulatory sequences from transposable elements. , 2003, Trends in genetics : TIG.
[52] Charles H. Bennett,et al. Notes on Landauer's Principle, Reversible Computation, and Maxwell's Demon , 2002, physics/0210005.
[53] C. Johnson,et al. Selection for restraint in competitive ability in spatial competition systems , 2002, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[54] C. Ofria,et al. Evolution of digital organisms at high mutation rates leads to survival of the flattest , 2001, Nature.
[55] T. O. Diener,et al. The viroid: biological oddity or evolutionary fossil? , 2001, Advances in virus research.
[56] E. Szathmáry. The evolution of replicators. , 2000, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[57] A. Read,et al. The Economics of Immunity , 2000, Science.
[58] B. K. Davis. Evolution of the genetic code. , 1999, Progress in biophysics and molecular biology.
[59] M. Huynen,et al. Neutral evolution of mutational robustness. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[60] C. Woese. The universal ancestor. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[61] D. Lilley,et al. DNA replication, 2nd edn , 1992 .
[62] E. Szathmáry,et al. Group selection of early replicators and the origin of life. , 1987, Journal of theoretical biology.
[63] J M Smith,et al. Evolution and the theory of games , 1976 .
[64] M. Gefter,et al. DNA Replication , 2019, Advances in Experimental Medicine and Biology.
[65] F. Kramer,et al. Complete nucleotide sequence of a replicating RNA molecule. , 1973, Science.
[66] S. Spiegelman,et al. An approach to the experimental analysis of precellular evolution , 1971, Quarterly Reviews of Biophysics.
[67] O. Günther. [Evolution and immunology]. , 1971, Hippokrates.
[68] S. Spiegelman,et al. Autocatalytic Synthesis of a Viral RNA in vitro , 1965, Science.
[69] R. Landauer,et al. Irreversibility and heat generation in the computing process , 1961, IBM J. Res. Dev..