A Bayesian Residual Transform for Signal Processing

Multiscale decomposition has been an invaluable tool for the processing of physiological signals. Much focus on multiscale decomposition for processing such signals have been based on scale-space theory and wavelet transforms. In this paper, we take a different perspective on multiscale decomposition by investigating the feasibility of utilizing a Bayesian-based method for multiscale signal decomposition called Bayesian residual transform (BRT) for the purpose of physiological signal processing. In BRT, a signal is modeled as the summation of residual signals, each characterizing information from the signal at different scales. A deep cascading framework is introduced as a realization of the BRT. Signal-to-noise ratio analysis using electrocardiography signals was used to illustrate the feasibility of using the BRT for suppressing the noise in physiological signals. Results in this paper show that it is feasible to utilize the BRT for processing physiological signals for tasks, such as noise suppression.

[1]  I. Christov,et al.  Filtering of electromyogram artifacts from the electrocardiogram. , 1999, Medical engineering & physics.

[2]  Alexander Wong,et al.  General Bayesian estimation for speckle noise reduction in optical coherence tomography retinal imagery. , 2010, Optics express.

[3]  Tingting Li,et al.  A Dual Role of Graphene Oxide Sheet Deposition on Titanate Nanowire Scaffolds for Osteo-implantation: Mechanical Hardener and Surface Activity Regulator , 2015, Scientific Reports.

[4]  Alexander Wong,et al.  Bayesian-based deconvolution fluorescence microscopy using dynamically updated nonstationary expectation estimates , 2015, Scientific reports.

[5]  Masoom A. Haider,et al.  Apparent Ultra-High $b$-Value Diffusion-Weighted Image Reconstruction via Hidden Conditional Random Fields , 2015, IEEE Transactions on Medical Imaging.

[6]  Christian Jutten,et al.  Multichannel ECG and Noise Modeling: Application to Maternal and Fetal ECG Signals , 2007, EURASIP J. Adv. Signal Process..

[7]  J.P. Marques de Sa,et al.  ECG noise filtering using wavelets with soft-thresholding methods , 1999, Computers in Cardiology 1999. Vol.26 (Cat. No.99CH37004).

[8]  M. S. Hussain,et al.  Wavelet denoising and Surface Electromyography analysis , 2012 .

[9]  A R Padhani,et al.  Diffusion-weighted MRI: a new functional clinical technique for tumour imaging. , 2006, The British journal of radiology.

[10]  Masoom A. Haider,et al.  Dual-stage correlated diffusion imaging , 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI).

[11]  David L. Donoho,et al.  De-noising by soft-thresholding , 1995, IEEE Trans. Inf. Theory.

[12]  I. Johnstone,et al.  Adapting to Unknown Smoothness via Wavelet Shrinkage , 1995 .

[13]  E. Nadaraya On Estimating Regression , 1964 .

[14]  Christian Jutten,et al.  A Nonlinear Bayesian Filtering Framework for ECG Denoising , 2007, IEEE Transactions on Biomedical Engineering.

[15]  Binwei Weng,et al.  ECG Denoising Based on the Empirical Mode Decomposition , 2006, 2006 International Conference of the IEEE Engineering in Medicine and Biology Society.

[16]  Israel Koren,et al.  Multiresolution representation and analysis of ECG waveforms , 1990, [1990] Proceedings Computers in Cardiology.

[17]  Jeffrey M. Hausdorff,et al.  Physionet: Components of a New Research Resource for Complex Physiologic Signals". Circu-lation Vol , 2000 .

[18]  Jitendra Malik,et al.  Scale-Space and Edge Detection Using Anisotropic Diffusion , 1990, IEEE Trans. Pattern Anal. Mach. Intell..

[19]  Farnoud Kazemzadeh,et al.  Bayesian-based aberration correction and numerical diffraction for improved lensfree on-chip microscopy of biological specimens. , 2015, Optics letters.

[20]  Paul Fieguth,et al.  Statistical Image Processing and Multidimensional Modeling , 2010 .

[21]  Masoom A. Haider,et al.  Correlated diffusion imaging , 2013, BMC Medical Imaging.

[22]  Jean-Michel Poggi,et al.  Wavelet Toolbox User s Guide , 1996 .

[23]  N. M. SOBAHI,et al.  Denoising of EMG Signals Based on Wavelet Transform , 2011 .

[24]  Guy Gilboa,et al.  Nonlinear Scale Space with Spatially Varying Stopping Time , 2008, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[25]  Manuel Blanco-Velasco,et al.  ECG signal denoising and baseline wander correction based on the empirical mode decomposition , 2008, Comput. Biol. Medicine.

[26]  M. Hoher,et al.  De-noising of high-resolution ECG signals by combining the discrete wavelet transform with the Wiener filter , 1998, Computers in Cardiology 1998. Vol. 25 (Cat. No.98CH36292).

[27]  E. Nadaraya Theory of Probability and its Applications , 1964 .

[28]  Hae Yong Kim,et al.  Anisotropic median-diffusion for filtering noisy electrocardiogram signals , 2008, 2008 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[29]  Steve McLaughlin,et al.  Development of EMD-Based Denoising Methods Inspired by Wavelet Thresholding , 2009, IEEE Transactions on Signal Processing.

[30]  Pornchai Phukpattaranont,et al.  EMG denoising estimation based on adaptive wavelet thresholding for multifunction myoelectric control , 2009, 2009 Innovative Technologies in Intelligent Systems and Industrial Applications.

[31]  Andrew P. Witkin,et al.  Scale-Space Filtering , 1983, IJCAI.

[32]  David A. Clausi,et al.  MSIM: Multistage Illumination Modeling of Dermatological Photographs for Illumination-Corrected Skin Lesion Analysis , 2013, IEEE Transactions on Biomedical Engineering.

[33]  I. Johnstone,et al.  Ideal spatial adaptation by wavelet shrinkage , 1994 .

[34]  Alexander Wong,et al.  Energy-guided learning approach to compressive FD-OCT. , 2013, Optics express.

[35]  Denis Le Bihan,et al.  Imagerie de diffusion in-vivo par résonance magnétique nucléaire , 1985 .

[36]  Alexander Wong,et al.  Bayesian-based deconvolution fluorescence microscopy using dynamically updated nonparametric nonstationary expectation estimates , 2015, 1502.01002.

[37]  Christian Jutten,et al.  ECG denoising using angular velocity as a state and an observation in an Extended Kalman Filter framework , 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[38]  Farnoud Kazemzadeh,et al.  Depth Profilometry via Multiplexed Optical High-Coherence Interferometry , 2015, PloS one.

[39]  Paul Dan Cristea,et al.  High resolution ECG filtering using adaptive Bayesian wavelet shrinkage , 1998, Computers in Cardiology 1998. Vol. 25 (Cat. No.98CH36292).

[40]  F. Bereksi-Reguig,et al.  Wavelet denoising of the electrocardiogram signal based on the corrupted noise estimation , 2005, Computers in Cardiology, 2005.

[41]  Karen J. Reynolds,et al.  Removing power line noise from recorded EMG , 2001, 2001 Conference Proceedings of the 23rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[42]  David A. Clausi,et al.  Quasi-random nonlinear scale space , 2010, Pattern Recognit. Lett..

[43]  Stéphane Mallat,et al.  A Theory for Multiresolution Signal Decomposition: The Wavelet Representation , 1989, IEEE Trans. Pattern Anal. Mach. Intell..

[44]  J. Koenderink The structure of images , 2004, Biological Cybernetics.

[45]  G. S. Watson,et al.  Smooth regression analysis , 1964 .

[46]  Alexander Wong,et al.  Generalized Probabilistic Scale Space for Image Restoration , 2010, IEEE Transactions on Image Processing.