Why repetitive DNA is essential to genome function
暂无分享,去创建一个
[1] S. Diachenko,et al. [ON RESEARCH IN MICROBIOLOGY]. , 1963, Mikrobiolohichnyi zhurnal.
[2] François Jacob,et al. On the Regulation of DNA Replication in Bacteria , 1963 .
[3] R. Britten,et al. Repeated sequences in DNA. Hundreds of thousands of copies of DNA sequences have been incorporated into the genomes of higher organisms. , 1968, Science.
[4] R. Britten,et al. Repeated Sequences in DNA , 1968 .
[5] R. Britten,et al. Gene regulation for higher cells: a theory. , 1969, Science.
[6] R. Britten,et al. Repetitive and Non-Repetitive DNA Sequences and a Speculation on the Origins of Evolutionary Novelty , 1971, The Quarterly Review of Biology.
[7] W. R. Carlson. The B chromosome of corn. , 1978, Annual review of genetics.
[8] R. Britten,et al. Regulation of gene expression: possible role of repetitive sequences. , 1979, Science.
[9] W. Doolittle,et al. Selfish genes, the phenotype paradigm and genome evolution , 1980, Nature.
[10] F. Crick,et al. Selfish DNA: the ultimate parasite , 1980, Nature.
[11] G. Dover,et al. Molecular drive: a cohesive mode of species evolution , 1982, Nature.
[12] J. Davies,et al. Molecular Biology of the Cell , 1983, Bristol Medico-Chirurgical Journal.
[13] Mobile Genetic Elements , 1983 .
[14] T. Cavalier-smith. The Evolution of genome size , 1985 .
[15] P. Musich,et al. The association of the interspersed repetitive KpnI sequences with the nuclear matrix. , 1985, The Journal of biological chemistry.
[16] A. Weiner,et al. Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information. , 1986, Annual review of biochemistry.
[17] H. Arnstein. The molecular biology of the cell : B. Alberts, D. Bray, J. Lewis, M. Raff, K. Roberts and J.D. Watson Garland Publishing; New York, London, 1983 xxxix + 1181 pages. $33.95 (hardback); $27.00, £14.95 (paperback, only in Europe) , 1986 .
[18] T. Meyer,et al. Common mechanism controlling phase and antigenic variation in pathogenic Neisseriae , 1987, Molecular microbiology.
[19] J. Sutcliffe,et al. Primate brain-specific cytoplasmic transcript of the Alu repeat family , 1987, Molecular and cellular biology.
[20] P. Dimitri,et al. Position effect variegation in Drosophila melanogaster: relationship between suppression effect and the amount of Y chromosome. , 1989, Genetics.
[21] P. Modrich,et al. Methyl-directed DNA mismatch correction. , 1989, The Journal of biological chemistry.
[22] M. Marinus,et al. The great GATC: DNA methylation in E. coli. , 1989, Trends in genetics : TIG.
[23] J. Monod,et al. Genetic regulatory mechanisms in the synthesis of proteins. , 1961, Journal of Molecular Biology.
[24] W. Zhang,et al. Repetitive DNA sequences linked to the sea urchin spec genes contain transcriptional enhancer-like elements. , 1990, Developmental biology.
[25] J. Mattick. Genome research , 1990, Nature.
[26] E. Selker. Premeiotic instability of repeated sequences in Neurospora crassa. , 1990, Annual review of genetics.
[27] M. Rubini,et al. Chromosomal evolution in Cervidae. , 1990, Bio Systems.
[28] R. DeSalle,et al. Nucleolus organizer-suppressed position-effect variegation in Drosophila melanogaster. , 1991, Genetical research.
[29] S. Normark,et al. Phase variation of gonococcal pili by frameshift mutation in pilC, a novel gene for pilus assembly. , 1991, The EMBO journal.
[30] U. K. Laemmli,et al. Scaffold-associated regions: cis-acting determinants of chromatin structural loops and functional domains. , 1992, Current opinion in genetics & development.
[31] M. Pagel,et al. Variation across species in the size of the nuclear genome supports the junk-DNA explanation for the C-value paradox , 1992, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[32] Differential binding of human nuclear proteins to Alu subfamilies. , 1992, Nucleic acids research.
[33] A J Jeffreys,et al. Minisatellite variant repeat mapping: application to DNA typing and mutation analysis. , 1993, EXS.
[34] R. E. Thayer,et al. Binding of the ubiquitous nuclear transcription factor YY1 to a cis regulatory sequence in the human LINE-1 transposable element. , 1993, Human molecular genetics.
[35] L. Shapiro,et al. Bacterial chromosome origins of replication. , 1993, Current opinion in genetics & development.
[36] L. Bachmann,et al. Gradual evolution of a specific satellite DNA family in Drosophila ambigua, D. tristis, and D. obscura. , 1993, Molecular biology and evolution.
[37] Johng K. Lim,et al. Gross chromosome rearrangements mediated by transposable elements in Drosophila melanogaster , 1994, BioEssays : news and reviews in molecular, cellular and developmental biology.
[38] S. Benzer,et al. Ingrowth by photoreceptor axons induces transcription of a retrotransposon in the developing Drosophila brain. , 1994, Development.
[39] M. Kloc,et al. Delocalization of Vg1 mRNA from the vegetal cortex in Xenopus oocytes after destruction of Xlsirt RNA , 1994 .
[40] M. Achtman,et al. Variable expression of the Opc outer membrane protein in Neisseria meningitidis is caused by size variation of a promoter containing poly‐cytidine , 1994, Molecular microbiology.
[41] M. Kloc,et al. Delocalization of Vg1 mRNA from the vegetal cortex in Xenopus oocytes after destruction of Xlsirt RNA. , 1994, Science.
[42] M. Yoshino,et al. Hotspots of homologous recombination in mouse meiosis. , 1995, Advances in biophysics.
[43] C. Caggese,et al. Transposable elements are stable structural components of Drosophila melanogaster heterochromatin. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[44] P. Deininger,et al. Identification of a New Subclass of Alu DNA Repeats Which Can Function as Estrogen Receptor-dependent Transcriptional Enhancers (*) , 1995, The Journal of Biological Chemistry.
[45] Ende,et al. Variable expression of class 1 outer membrane protein in Neisseria meningitidis is caused by variation in the spacing between the -10 and -35 regions of the promoter , 1995, Journal of bacteriology.
[46] W F Reynolds,et al. The consensus sequence of a major Alu subfamily contains a functional retinoic acid response element. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[47] G. Chang,et al. Crystal Structure of the Lactose Operon Repressor and Its Complexes with DNA and Inducer , 1996, Science.
[48] B. Howard,et al. Specific binding sites for a pol III transcriptional repressor and pol II transcription factor YY1 within the internucleosomal spacer region in primate Alu repetitive elements. , 1996, Gene expression.
[49] R. Britten,et al. DNA sequence insertion and evolutionary variation in gene regulation. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[50] B. Brinkley,et al. Structure and dynamic organization of centromeres/prekinetochores in the nucleus of mammalian cells. , 1996, Journal of cell science.
[51] S. Henikoff. Dosage-dependent modification of position-effect variegation in Drosophila. , 1996, BioEssays : news and reviews in molecular, cellular and developmental biology.
[52] B. Müller-Hill,et al. Repression of lac promoter as a function of distance, phase and quality of an auxiliary lac operator. , 1996, Journal of molecular biology.
[53] Benno Müller-Hill,et al. Repression oflacPromoter as a Function of Distance, Phase and Quality of an AuxiliarylacOperator , 1996 .
[54] C. Schmid,et al. Alu: structure, origin, evolution, significance and function of one-tenth of human DNA. , 1996, Progress in nucleic acid research and molecular biology.
[55] D M Prescott,et al. Volatility of internal eliminated segments in germ line genes of hypotrichous ciliates , 1997, Molecular and cellular biology.
[56] A. V. Kropotov,et al. [Nonhistone chromosome proteins HMG1 and HMG2 stabilize one of the sequence-specific complexes, formed on the promotor of human retroposons of the ALU-family of other nuclear proteins]. , 1997, Molekuliarnaia genetika, mikrobiologiia i virusologiia.
[57] K. Sullivan,et al. Chromatin containing CENP-A and α-satellite DNA is a major component of the inner kinetochore plate , 1997, Current Biology.
[58] Y. Kashi,et al. Simple sequence repeats as a source of quantitative genetic variation. , 1997, Trends in genetics : TIG.
[59] E. Davidson,et al. The hardwiring of development: organization and function of genomic regulatory systems. , 1997, Development.
[60] M. Bennett,et al. Plant genome values: how much do we know? , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[61] R. Phillips,et al. Complex structure of knob DNA on maize chromosome 9. Retrotransposon invasion into heterochromatin. , 1998, Genetics.
[62] R. Lawn,et al. Apolipoprotein(a) Gene Enhancer Resides within a LINE Element* , 1998, The Journal of Biological Chemistry.
[63] B. Wakimoto,et al. Beyond the Nucleosome: Epigenetic Aspects of Position–Effect Variegation in Drosophila , 1998, Cell.
[64] R. Phillips,et al. Chromosome-specific molecular organization of maize (Zea mays L.) centromeric regions. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[65] J. Bennetzen,et al. Matrix attachment regions and structural colinearity in the genomes of two grass species. , 1998, Nucleic acids research.
[66] D. Mazel,et al. A distinctive class of integron in the Vibrio cholerae genome. , 1998, Science.
[67] Yoshio Masui,et al. Understanding the cell cycle , 1998, Nature Medicine.
[68] S. Jackson,et al. Retrotransposon-related DNA sequences in the centromeres of grass chromosomes. , 1998, Genetics.
[69] S. Elgin,et al. Characterization of sequences associated with position-effect variegation at pericentric sites in Drosophila heterochromatin , 1998, Chromosoma.
[70] H. Biessmann,et al. Directional gene silencing induced by a complex subtelomeric satellite from Drosophila , 1998, Chromosoma.
[71] E. Davidson,et al. Genomic cis-regulatory logic: experimental and computational analysis of a sea urchin gene. , 1998, Science.
[72] Manuel Espinosa,et al. Plasmids Replication and Control of Circular Bacterial , 1998 .
[73] R. Phillips,et al. A knob-associated tandem repeat in maize capable of forming fold-back DNA segments: are chromosome knobs megatransposons? , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[74] T. Taira,et al. Ku antigen binds to Alu family DNA. , 1998, Journal of biochemistry.
[75] M. Haas,et al. Isolation of an Alu repetitive DNA binding protein and effect of CpG methylation on binding to its recognition sequence. , 1998, Biochimica et biophysica acta.
[76] J. Jurka,et al. The BC200 RNA Gene and Its Neural Expression Are Conserved in Anthropoidea (Primates) , 1998, Journal of Molecular Evolution.
[77] M. Marra,et al. Genetic definition and sequence analysis of Arabidopsis centromeres. , 1999, Science.
[78] R. Fournier,et al. Identification and characterization of nuclear matrix-attachment regions in the human serpin gene cluster at 14q32.1. , 1999, Nucleic acids research.
[79] G. Fourel,et al. Cohabitation of insulators and silencing elements in yeast subtelomeric regions , 1999, The EMBO journal.
[80] W. Keller,et al. Last but Not Least Regulated Poly(A) Tail Formation , 1999, Cell.
[81] V. Babich,et al. Association of some potential hormone response elements in human genes with the Alu family repeats. , 1999, Gene.
[82] F. Pryde,et al. Limitations of silencing at native yeast telomeres , 1999, The EMBO journal.
[83] J. S. St. Geme,et al. Variation in expression of the Haemophilus influenzae HMW adhesins: a prokaryotic system reminiscent of eukaryotes. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[84] Jia Rui Wu,et al. Regulation of eukaryotic DNA replication and nuclear structure , 1999, Cell Research.
[85] B. Ahring,et al. Stress Genes and Proteins in the Archaea , 1999, Microbiology and Molecular Biology Reviews.
[86] M. Turker,et al. Tandem B1 Elements Located in a Mouse Methylation Center Provide a Target for de Novo DNA Methylation* , 1999, The Journal of Biological Chemistry.
[87] P. Dimitri,et al. Revising the selfish DNA hypothesis: new evidence on accumulation of transposable elements in heterochromatin. , 1999, Trends in genetics : TIG.
[88] E N Trifonov,et al. Elucidating Sequence Codes: Three Codes for Evolution , 1999, Annals of the New York Academy of Sciences.
[89] P. Kloetzel,et al. A second gene encoding the mouse proteasome activator PA28beta subunit is part of a LINE1 element and is driven by a LINE1 promoter. , 1999, Journal of molecular biology.
[90] V. Ivanov,et al. A novel human DNA-binding protein with sequence similarity to a subfamily of redox proteins which is able to repress RNA-polymerase-III-driven transcription of the Alu-family retroposons in vitro. , 2001, European journal of biochemistry.
[91] M. Carmell,et al. Posttranscriptional Gene Silencing in Plants , 2006 .
[92] Mikael Kubista,et al. Nucleosome Structural Features and Intrinsic Properties of the TATAAACGCC Repeat Sequence* , 1999, The Journal of Biological Chemistry.
[93] E. Wahle,et al. 3'-End processing of pre-mRNA in eukaryotes. , 1999, FEMS microbiology reviews.
[94] S. Schbath,et al. Characteristics of Chi distribution on different bacterial genomes. , 1999, Research in microbiology.
[95] I. Henderson,et al. Molecular switches — the ON and OFF of bacterial phase variation , 1999, Molecular microbiology.
[96] J. Brosius,et al. RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements. , 1999, Gene.
[97] M. Marra,et al. Genetic Definition and Sequence Analysis of , 1999 .
[98] J. Shapiro. Genome System Architecture and Natural Genetic Engineering in Evolution , 1999, Annals of the New York Academy of Sciences.
[99] J. V. Moran,et al. Exon shuffling by L1 retrotransposition. , 1999, Science.
[100] A. Richardson,et al. HmbR, a Hemoglobin-Binding Outer Membrane Protein of Neisseria meningitidis, Undergoes Phase Variation , 1999, Journal of bacteriology.
[101] G. R. Smith,et al. A family of cAMP-response-element-related DNA sequences with meiotic recombination hotspot activity in Schizosaccharomyces pombe. , 2000, Genetics.
[102] W. Li,et al. A novel Pax-6 binding site in rodent B1 repetitive elements: coevolution between developmental regulation and repeated elements? , 2000, Gene.
[103] H. Tettelin,et al. Repeat‐associated phase variable genes in the complete genome sequence of Neisseria meningitidis strain MC58 , 2000, Molecular microbiology.
[104] The Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana , 2000, Nature.
[105] L. Bachmann,et al. Evolutionary dynamics of the SGM transposon family in the Drosophila obscura species group. , 2000, Molecular biology and evolution.
[106] David M. Prescott,et al. Genome gymnastics: unique modes of dna evolution and processing in ciliates , 2000, Nature Reviews Genetics.
[107] K. Kuma,et al. Class switch recombination of the chicken IgH chain genes: implications for the primordial switch region repeats. , 2000, International immunology.
[108] A. Ogiwara,et al. Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis. , 2000, Nucleic acids research.
[109] Y. Gray,et al. It takes two transposons to tango: transposable-element-mediated chromosomal rearrangements. , 2000, Trends in genetics : TIG.
[110] Michael Q. Zhang,et al. Large-scale human promoter mapping using CpG islands , 2000, Nature Genetics.
[111] L. Figueiredo,et al. Genomic organisation and chromatin structure of Plasmodium falciparum chromosome ends. , 2000, Molecular and biochemical parasitology.
[112] A. Barbour,et al. Surface Protein Variation by Expression Site Switching in the Relapsing Fever Agent Borrelia hermsii , 2000, Infection and Immunity.
[113] N. Khodarev,et al. LINE L1 retrotransposable element is targeted during the initial stages of apoptotic DNA fragmentation , 2000, Journal of cellular biochemistry.
[114] S. Ehrlich,et al. The Bacillus subtilis AddAB helicase/nuclease is regulated by its cognate Chi sequence in vitro. , 2000, Journal of molecular biology.
[115] T. Heidmann,et al. Members of the SRY family regulate the human LINE retrotransposons. , 2000, Nucleic acids research.
[116] M. Lyon,et al. LINE-1 elements and X chromosome inactivation: a function for "junk" DNA? , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[117] V. Corces,et al. A chromatin insulator determines the nuclear localization of DNA. , 2000, Molecular cell.
[118] M. Matzke,et al. Transcriptional silencing and promoter methylation triggered by double‐stranded RNA , 2000, The EMBO journal.
[119] B. Barrell,et al. Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491 , 2000, Nature.
[120] K. Choo,et al. Domain organization at the centromere and neocentromere. , 2001, Developmental cell.
[121] J. Jurka,et al. Rolling-circle transposons in eukaryotes , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[122] M. Zannis‐Hadjopoulos,et al. In vivo association of Ku with mammalian origins of DNA replication. , 2001, Molecular biology of the cell.
[123] D. Low,et al. Roles of DNA Adenine Methylation in Regulating Bacterial Gene Expression and Virulence , 2001, Infection and Immunity.
[124] M. Morgante,et al. Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome. , 2001, Genome research.
[125] John J. Wyrick,et al. Genome-Wide Distribution of ORC and MCM Proteins in S. cerevisiae: High-Resolution Mapping of Replication Origins , 2001, Science.
[126] L. Moulin,et al. Transcription attenuation associated with bacterial repetitive extragenic BIME elements. , 2001, Journal of molecular biology.
[127] J. Ortonne,et al. Transposable B2 SINE elements can provide mobile RNA polymerase II promoters , 2001, Nature Genetics.
[128] S. Henikoff,et al. The Centromere Paradox: Stable Inheritance with Rapidly Evolving DNA , 2001, Science.
[129] T. Honjo,et al. Linking class-switch recombination with somatic hypermutation , 2001, Nature Reviews Molecular Cell Biology.
[130] F. Baas,et al. The Human Transcriptome Map: Clustering of Highly Expressed Genes in Chromosomal Domains , 2001, Science.
[131] O. Cuvier,et al. Identification of a multicopy chromatin boundary element at the borders of silenced chromosomal domains , 2002, Chromosoma.
[132] D. Yogev,et al. Juxtaposition of an Active Promoter to vsp Genes via Site-Specific DNA Inversions Generates Antigenic Variation inMycoplasma bovis , 2001, Journal of bacteriology.
[133] J. Hodgson,et al. Site-Specific Recognition of a 70-Base-Pair Element Containing d(GA)n Repeats Mediatesbithoraxoid Polycomb Group Response Element-Dependent Silencing , 2001, Molecular and Cellular Biology.
[134] E. Eichler,et al. Recent duplication, domain accretion and the dynamic mutation of the human genome. , 2001, Trends in genetics : TIG.
[135] G. Fourel,et al. Protosilencers in Saccharomyces cerevisiae subtelomeric regions. , 2001, Genetics.
[136] A. Nekrutenko,et al. Transposable elements are found in a large number of human protein-coding genes. , 2001, Trends in genetics : TIG.
[137] J. Dankert,et al. Analysis of a VMP-like sequence (vls) locus in Borrelia garinii and Vls homologues among four Borrelia burgdorferi sensu lato species. , 2001, FEMS microbiology letters.
[138] A. Rich,et al. A polymorphic dinucleotide repeat in the rat nucleolin gene forms Z-DNA and inhibits promoter activity , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[139] J. Mallet,et al. Quantitative effects on gene silencing by allelic variation at a tetranucleotide microsatellite. , 2001, Human molecular genetics.
[140] T. Gregory,et al. Temporal control of DNA replication and the adaptive value of chromatin diminution in copepods. , 2001, The Journal of experimental zoology.
[141] D. Petrov. Evolution of genome size: new approaches to an old problem. , 2001, Trends in genetics : TIG.
[142] H. Morrison,et al. Three retrotransposon families in the genome of Giardia lamblia: Two telomeric, one dead , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[143] J. R. Fresco,et al. Functional pleiotropy of an intramolecular triplex-forming fragment from the 3'-UTR of the rat Pigr gene. , 2001, Physiological genomics.
[144] M. Speek. Antisense Promoter of Human L1 Retrotransposon Drives Transcription of Adjacent Cellular Genes , 2001, Molecular and Cellular Biology.
[145] C D Bayliss,et al. The simple sequence contingency loci of Haemophilus influenzae and Neisseria meningitidis. , 2001, The Journal of clinical investigation.
[146] I. Biswas,et al. Distinctive features of homologous recombination in an 'old' microorganism, Lactococcus lactis. , 2001, Research in microbiology.
[147] M. Matzke,et al. RNA: Guiding Gene Silencing , 2001, Science.
[148] C. Allis,et al. Translating the Histone Code , 2001, Science.
[149] E. Winzeler,et al. Genomic and Genetic Definition of a Functional Human Centromere , 2001, Science.
[150] J. Sawitzke,et al. An analysis of the factory model for chromosome replication and segregation in bacteria , 2001, Molecular microbiology.
[151] J. V. Moran,et al. Initial sequencing and analysis of the human genome. , 2001, Nature.
[152] Gerald M Rubin,et al. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly , 2002, Genome Biology.
[153] L. Speybroeck. From Epigenesis to Epigenetics: the genome in context. , 2002 .
[154] J. Shapiro,et al. Repetitive DNA, genome system architecture and genome reorganization. , 2002, Research in microbiology.
[155] Tsuyoshi Koide,et al. Molecular characterization of the Pb recombination hotspot in the mouse major histocompatibility complex class II region. , 2002, Genomics.
[156] B. Kwon,et al. An intronic silencer of the mouse perforin gene. , 2002, Molecules and cells.
[157] V. Corces,et al. Setting the Boundaries of Chromatin Domains and Nuclear Organization , 2002, Cell.
[158] B. Reinhart,et al. Small RNAs Correspond to Centromere Heterochromatic Repeats , 2002, Science.
[159] Yuri Y. Shevelyov,et al. Large clusters of co-expressed genes in the Drosophila genome , 2002, Nature.
[160] F. Alt,et al. The Mechanism and Regulation of Chromosomal V(D)J Recombination , 2002, Cell.
[161] K. Robertson. DNA methylation and chromatin – unraveling the tangled web , 2002, Oncogene.
[162] M. Gellert. V(D)J recombination: RAG proteins, repair factors, and regulation. , 2002, Annual review of biochemistry.
[163] A. Oliphant,et al. A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). , 2002, Science.
[164] C. Schmid,et al. Selective stimulation of translational expression by Alu RNA. , 2002, Nucleic acids research.
[165] H. Willard,et al. Alpha-satellite DNA and vector composition influence rates of human artificial chromosome formation. , 2002, Molecular therapy : the journal of the American Society of Gene Therapy.
[166] F. Blattner,et al. Functional Rice Centromeres Are Marked by a Satellite Repeat and a Centromere-Specific Retrotransposon Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.003079. , 2002, The Plant Cell Online.
[167] T. Mahmoudi,et al. GAGA can mediate enhancer function in trans by linking two separate DNA molecules , 2002, The EMBO journal.
[168] Huanming Yang,et al. A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica) , 2002, Science.
[169] S. Grewal,et al. Heterochromatin: new possibilities for the inheritance of structure. , 2002, Current opinion in genetics & development.
[170] Ira M. Hall,et al. Establishment and Maintenance of a Heterochromatin Domain , 2002, Science.
[171] Alan M. Lambowitz,et al. Mobile DNA III , 2002 .
[172] Paul Richardson,et al. The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins , 2002, Science.
[173] Paramvir S. Dehal,et al. Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes , 2002, Science.
[174] J. Shapiro. Genome Organization and Reorganization in Evolution , 2002, Annals of the New York Academy of Sciences.
[175] V. Robert,et al. Drosophila germline invasion by the endogenous retrovirus gypsy: involvement of the viral env gene. , 2002, Insect biochemistry and molecular biology.
[176] Dominique Mouchiroud,et al. CpGProD: identifying CpG islands associated with transcription start sites in large genomic mammalian sequences , 2002, Bioinform..
[177] L. Speybroeck,et al. Theories in Early Embryology , 2002 .
[178] Laurent Duret,et al. Comparative sequence analysis of the X-inactivation center region in mouse, human, and bovine. , 2000, Genome research.
[179] C. Topp,et al. Centromeric Retroelements and Satellites Interact with Maize Kinetochore Protein CENH3 , 2002, The Plant Cell Online.
[180] Ira M. Hall,et al. Regulation of Heterochromatic Silencing and Histone H3 Lysine-9 Methylation by RNAi , 2002, Science.
[181] E. Myers,et al. Finishing a whole-genome shotgun: Release 3 of the Drosophila melanogaster euchromatic genome sequence , 2002, Genome Biology.
[182] Colin N. Dewey,et al. Initial sequencing and comparative analysis of the mouse genome. , 2002 .
[183] H. Kitano. Systems Biology: A Brief Overview , 2002, Science.
[184] R. Baker,et al. Distribution of LINEs and other repetitive elements in the karyotype of the bat Carollia: implications for X-chromosome inactivation , 2002, Cytogenetic and Genome Research.
[185] D. Bentley. The mRNA assembly line: transcription and processing machines in the same factory. , 2002, Current opinion in cell biology.
[186] A. Bird. DNA methylation patterns and epigenetic memory. , 2002, Genes & development.
[187] J. Olivo-Marin,et al. A central role for Plasmodium falciparum subtelomeric regions in spatial positioning and telomere length regulation , 2002, The EMBO journal.
[188] B. Alberts,et al. Molecular Biology of the Cell 4th edition , 2007 .
[189] M. Speek,et al. Many human genes are transcribed from the antisense promoter of L1 retrotransposon. , 2002, Genomics.
[190] T. Jenuwein. An RNA-Guided Pathway for the Epigenome , 2002, Science.
[191] Xun Gu,et al. Novel PAX6 binding sites in the human genome and the role of repetitive elements in the evolution of gene regulation. , 2002, Genome research.
[192] Joshua M. Stuart,et al. Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans , 2002, Nature.
[193] M. R. O'Brian,et al. Identification of a Soybean Protein That Interacts with GAGA Element Dinucleotide Repeat DNA1 , 2002, Plant Physiology.
[194] Y. Dong,et al. Systematic functional analysis of the Caenorhabditis elegans genome using RNAi , 2003, Nature.
[195] David G. Harris,et al. Conserved fragments of transposable elements in intergenic regions: evidence for widespread recruitment of MIR- and L2-derived sequences within the mouse and human genomes. , 2003, Genetical research.
[196] Jia Liu,et al. Molecular and cytological analyses of large tracks of centromeric DNA reveal the structure and evolutionary dynamics of maize centromeres. , 2003, Genetics.
[197] R. van Driel,et al. The eukaryotic genome: a system regulated at different hierarchical levels , 2003, Journal of Cell Science.
[198] R. Durbin,et al. The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics , 2003, PLoS biology.
[199] E. Eichler,et al. Structural Dynamics of Eukaryotic Chromosome Evolution , 2003, Science.
[200] M. Murata,et al. A centromeric tandem repeat family originating from a part of Ty3/gypsy-retroelement in wheat and its relatives. , 2003, Genetics.
[201] M. Seldin,et al. Examination of sequence homology between human chromosome 20 and the mouse genome: intense conservation of many genomic elements , 2003, Human Genetics.
[202] Benjamin Audit,et al. From genes to genomes: universal scale-invariant properties of microbial chromosome organisation. , 2003, Journal of molecular biology.
[203] S. Henikoff,et al. Chromatin immunoprecipitation reveals that the 180-bp satellite repeat is the key functional DNA element of Arabidopsis thaliana centromeres. , 2003, Genetics.
[204] D. Dubnau,et al. DNA transport during transformation. , 2003, Frontiers in bioscience : a journal and virtual library.
[205] Ilia J Leitch,et al. Comparisons with Caenorhabditis (approximately 100 Mb) and Drosophila (approximately 175 Mb) using flow cytometry show genome size in Arabidopsis to be approximately 157 Mb and thus approximately 25% larger than the Arabidopsis genome initiative estimate of approximately 125 Mb. , 2003, Annals of botany.
[206] M. Kloc,et al. Identification of new Xlsirt family members in the Xenopus laevis oocyte , 2003, Mechanisms of Development.
[207] M. Allarakhia,et al. Identification of a cis-Element That Determines Autonomous DNA Replication in Eukaryotic Cells* , 2003, Journal of Biological Chemistry.
[208] G. Glazko,et al. Origin of a substantial fraction of human regulatory sequences from transposable elements. , 2003, Trends in genetics : TIG.
[209] K. Jin,et al. Ero1‐L, an ischemia‐inducible gene from rat brain with homology to global ischemia‐induced gene 11 (Giig11), is localized to neuronal dendrites by a dispersed identifier (ID) element‐dependent mechanism , 2003, Journal of neurochemistry.
[210] Harmen J. Bussemaker,et al. Genomewide analysis of Drosophila GAGA factor target genes reveals context-dependent DNA binding , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[211] Joseph K. Pickrell,et al. Identification of a novel "chromosome scaffold" protein that associates with Tec elements undergoing en masse elimination in Euplotes crassus. , 2003, Molecular Biology of the Cell.
[212] R. Festenstein,et al. DNA triplet repeats mediate heterochromatin-protein-1-sensitive variegated gene silencing , 2003, Nature.
[213] D. Wanke,et al. The GA octodinucleotide repeat binding factor BBR participates in the transcriptional regulation of the homeobox gene Bkn3. , 2003, The Plant journal : for cell and molecular biology.
[214] R. Dawe. RNA Interference, Transposons, and the Centromere , 2003, The Plant Cell Online.
[215] Alexander E Vinogradov,et al. Selfish DNA is maladaptive: evidence from the plant Red List. , 2003, Trends in genetics : TIG.
[216] S. Henikoff,et al. Distinct HP1 and Su(var)3-9 complexes bind to sets of developmentally coexpressed genes depending on chromosomal location. , 2003, Genes & development.
[217] R. Haché,et al. Differential DNA binding of Ku antigen determines its involvement in DNA replication. , 2003, DNA and cell biology.
[218] H. Bussemaker,et al. The human transcriptome map reveals extremes in gene density, intron length, GC content, and repeat pattern for domains of highly and weakly expressed genes. , 2003, Genome research.
[219] M. Blaser,et al. Plasticity of Repetitive DNA Sequences within a Bacterial (Type IV) Secretion System Component , 2003, The Journal of experimental medicine.
[220] M. Curcio,et al. Activation of a LTR-retrotransposon by telomere erosion , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[221] D. A. Kramerov,et al. B1 and related SINEs in mammalian genomes. , 2003, Gene.
[222] R. Martienssen,et al. Maintenance of heterochromatin by RNA interference of tandem repeats , 2003, Nature Genetics.
[223] Peter Kraft,et al. High concentrations of long interspersed nuclear element sequence distinguish monoallelically expressed genes , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[224] M. Pardue,et al. Retrotransposons provide an evolutionarily robust non-telomerase mechanism to maintain telomeres. , 2003, Annual review of genetics.
[225] D. Anxolabéhère,et al. Telomeric associated sequences of Drosophila recruit polycomb-group proteins in vivo and can induce pairing-sensitive repression. , 2003, Genetics.
[226] Deepak Grover,et al. Nonrandom distribution of alu elements in genes of various functional categories: insight from analysis of human chromosomes 21 and 22. , 2003, Molecular biology and evolution.
[227] J. V. Moran,et al. Mobile elements and mammalian genome evolution. , 2003, Current opinion in genetics & development.
[228] V. Corces,et al. Visualization of chromatin domains created by the gypsy insulator of Drosophila , 2003, The Journal of cell biology.
[229] G. Schotta,et al. Position-effect variegation and the genetic dissection of chromatin regulation in Drosophila. , 2003, Seminars in cell & developmental biology.
[230] E. Eichler,et al. An Alu transposition model for the origin and expansion of human segmental duplications. , 2003, American journal of human genetics.
[231] E. Kirkness,et al. The Dog Genome: Survey Sequencing and Comparative Analysis , 2003, Science.
[232] Martin J Blaser,et al. Extensive repetitive DNA facilitates prokaryotic genome plasticity , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[233] G. Favre,et al. Cloning of the human RHOB gene promoter: characterization of a VNTR sequence that affects transcriptional activity. , 2003, Genomics.
[234] J. Li-Pook-Than,et al. The new RENT family of repetitive elements in Nicotiana species harbors gene regulatory elements related to the tCUP cryptic promoter. , 2003, Genome.
[235] Ilia J. Leitch,et al. Comparisons with Caenorhabditis (∼100 Mb) and Drosophila (∼175 Mb) Using Flow Cytometry Show Genome Size in Arabidopsis to be ∼157 Mb and thus ∼25 % Larger than the Arabidopsis Genome Initiative Estimate of ∼125 Mb , 2003 .
[236] M. Lynch,et al. The Origins of Genome Complexity , 2003, Science.
[237] T. Volpe,et al. RNA interference is required for normal centromere function infission yeast , 2004, Chromosome Research.
[238] James A. Birchler,et al. Heterochromatic Silencing and HP1 Localization in Drosophila Are Dependent on the RNAi Machinery , 2004, Science.
[239] A. Dowsett. Closely related species of Drosophila can contain different libraries of middle repetitive DNA sequences , 2004, Chromosoma.
[240] James A. Shapiro,et al. Transposable elements as the key to a 21st century view of evolution , 2004, Genetica.
[241] Songtao Jia,et al. RNAi-Mediated Targeting of Heterochromatin by the RITS Complex , 2004, Science.
[242] J. Deragon,et al. DNA regions flanking the major Arabidopsis thaliana satellite are principally enriched in Athila retroelement sequences , 1996, Genetica.
[243] J. Edström,et al. Telomere-associated repeats in Chironomus form discrete subfamilies generated by gene conversion , 1992, Journal of Molecular Evolution.
[244] S. Beermann. The diminution of heterochromatic chromosomal segments in Cyclops (Crustacea, Copepoda) , 1977, Chromosoma.
[245] J. Bennetzen,et al. Transposable element contributions to plant gene and genome evolution , 2004, Plant Molecular Biology.
[246] Emile Zuckerkandl,et al. Why so many noncoding nucleotides ? The eukaryote genome as an epigenetic machine , 2002, Genetica.
[247] P. Herron,et al. Mobile DNA II , 2004, Heredity.
[248] B. McKee,et al. On the Roles of Heterochromatin and Euchromatin in Meiosis in Drosophila: Mapping Chromosomal Pairing Sites and Testing Candidate Mutations for Effects on X–Y Nondisjunction and Meiotic Drive in Male Meiosis , 2004, Genetica.
[249] Y. Kamisugi,et al. Analysis of hypermethylation in the RPS element suggests a signal function for short inverted repeats in de novo methylation , 2002, Plant Molecular Biology.
[250] A. Sui,et al. Binding of mouse VL30 retrotransposon RNA to PSF protein induces genes repressed by PSF: effects on steroidogenesis and oncogenesis. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[251] Jef D. Boeke,et al. Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes , 2004, Nature.
[252] L. K. Hansen,et al. Repeated sequences from theArabidopsis thaliana genome function as enhancers in transgenic tobacco , 1996, Molecular and General Genetics MGG.
[253] G. Moore,et al. A cereal centromeric sequence , 1996, Chromosoma.