A new approach for denoising multichannel electrogastrographic signals

Abstract Electrogastrography (EGG) can be considered as a non-invasive method for the measurement of gastric myoelectrical activity. The multichannel signal is non-invasively captured by disposable electrodes placed on the surface of a stomach. The recorded signal can include not only EGG components, but also the interfering signals from other organs, for instance, the disturbances connected with respiratory movements and random noise. In order to correctly calculate the parameters of the EGG examination and improve the patient's diagnosis, the EGG signal requires effective methods for removing disturbances. The aim of this work was to investigate a new approach for denosing the multichannel electrogastrographic signals, performed by means of the Noise-Assisted Empirical Mode Decomposition (NA-MEMD) and adaptive filtering. The proposed method uses NA-MEMD for extracting the reference signal for adaptive filtering in the cosine domain. The suggested technique was validated by comparing the obtained results with the outcomes acquired by the reference method based on the classical bandpass filtering, Independent Component Analysis (ICA) and adaptive filtering. The effectiveness of the proposed algorithm was established by examining the influence of adaptive filtering on the basic diagnostic parameters, calculated from the EGG signal, such as the dominant frequency (DF), the normogastric rhythm index (NI), the frequency instability coefficient (FIC), and the power instability coefficient (PIC). In addition, the effectiveness of the noise attenuation by the proposed method was verified. The paper presents the results of research carried out for the five healthy subjects. Validation of the proposed method was performed using real human EGG signals and real EGG signals with added synthetic noise.

[1]  Hualou Liang,et al.  Stimulus artifact cancellation in the serosal recordings of gastric myoelectric activity using wavelet transform , 2002, IEEE Trans. Biomed. Eng..

[2]  B. Widrow,et al.  Adaptive noise cancelling: Principles and applications , 1975 .

[3]  Xuemei Lin,et al.  Detection of gastric slow wave propagation from the cutaneous electrogastrogram. , 1999, American journal of physiology. Gastrointestinal and liver physiology.

[4]  Erkki Oja,et al.  Independent component analysis: algorithms and applications , 2000, Neural Networks.

[5]  H. Parkman,et al.  Electrogastrography: a document prepared by the gastric section of the American Motility Society Clinical GI Motility Testing Task Force , 2003, Neurogastroenterology and motility : the official journal of the European Gastrointestinal Motility Society.

[6]  Danilo P. Mandic,et al.  Empirical Mode Decomposition for Trivariate Signals , 2010, IEEE Transactions on Signal Processing.

[7]  Damian Grzechca,et al.  The wireless system for EGG signal acquisition , 2012, 2012 19th IEEE International Conference on Electronics, Circuits, and Systems (ICECS 2012).

[8]  Aapo Hyvärinen,et al.  Fast and robust fixed-point algorithms for independent component analysis , 1999, IEEE Trans. Neural Networks.

[9]  Hun H. Sun,et al.  Continuous Wavelet Analysis as an Aid in the Representation and Interpretation of Electrogastrographic Signals , 2004, Annals of Biomedical Engineering.

[10]  Danilo P. Mandic,et al.  Filter Bank Property of Multivariate Empirical Mode Decomposition , 2011, IEEE Transactions on Signal Processing.

[11]  N. Huang,et al.  The empirical mode decomposition and the Hilbert spectrum for nonlinear and non-stationary time series analysis , 1998, Proceedings of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences.

[12]  Barbara Błońska-Fajfrowska,et al.  [Application of electrogastrography in pediatrics. Part I. Definition of normal ranges of parameters of an electrogastrogram in Polish children]. , 2007, Wiadomosci lekarskie.

[13]  D. P. Mandic,et al.  Multivariate empirical mode decomposition , 2010, Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences.

[14]  N. Huang,et al.  The Mechanism for Frequency Downshift in Nonlinear Wave Evolution , 1996 .

[15]  H. Liang,et al.  Artifact reduction in electrogastrogram based on empirical mode decomposition method , 2006, Medical and Biological Engineering and Computing.

[16]  Pierre Comon,et al.  Independent component analysis, A new concept? , 1994, Signal Process..

[17]  J.D.Z. Chen,et al.  Spectral analysis of episodic rhythmic variations in the cutaneous electrogastrogram , 1993, IEEE Transactions on Biomedical Engineering.

[18]  W. C. Alvarez,et al.  The electrogastrogram and what it shows , 1922 .

[19]  Francesco Russo,et al.  Electrogastrography in Adults and Children: The Strength, Pitfalls, and Clinical Significance of the Cutaneous Recording of the Gastric Electrical Activity , 2013, BioMed research international.

[20]  Zhiyue Lin,et al.  Comparison of adaptive filtering in time-, transform- and frequency-domain: An electrogastrographic study , 2006, Annals of Biomedical Engineering.

[21]  J. Garcia-Casado,et al.  Identification of the Slow Wave of Bowel Myoelectrical Surface Recording by Empirical Mode Decomposition , 2006, 2006 International Conference of the IEEE Engineering in Medicine and Biology Society.

[22]  Aapo Hyvärinen,et al.  Survey on Independent Component Analysis , 1999 .

[23]  N.V. Thakor,et al.  Applications of adaptive filtering to ECG analysis: noise cancellation and arrhythmia detection , 1991, IEEE Transactions on Biomedical Engineering.

[24]  Z. S. Wang,et al.  Blind separation of multichannel electrogastrograms using independent component analysis based on a neural network , 2006, Medical & Biological Engineering & Computing.

[25]  Norden E. Huang,et al.  Ensemble Empirical Mode Decomposition: a Noise-Assisted Data Analysis Method , 2009, Adv. Data Sci. Adapt. Anal..

[26]  D. Levanon,et al.  Electrogastrography: its role in managing gastric disorders. , 1998, Journal of pediatric gastroenterology and nutrition.

[27]  Grant C. Goulet,et al.  The Gastrointestinal System , 2014, Springer Netherlands.

[28]  Simon Haykin,et al.  Communication Systems , 1978 .

[29]  Jie Liang,et al.  What Can Be Measured from Surface Electrogastrography , 1997 .

[30]  Guo Xiao-jing,et al.  The EEG Signal Preprocessing Based on Empirical Mode Decomposition , 2008, 2008 2nd International Conference on Bioinformatics and Biomedical Engineering.

[31]  Dariusz Komorowski The First Experience with the Use of Noise-Assisted Empirical Mode Decomposition Algorithm in the Processing of Multi-channel Electrogastrography Signals , 2016, ITIB.

[32]  Daniel C. Sadowski,et al.  Electrical Activity from Colon Overlaps with Normal Gastric Electrical Activity in Cutaneous Recordings , 2002, Digestive Diseases and Sciences.

[33]  J. Chen,et al.  Electrogastrography: measuremnt, analysis and prospective applications , 1991, Medical and Biological Engineering and Computing.

[34]  Danilo P. Mandic,et al.  Empirical Mode Decomposition-Based Time-Frequency Analysis of Multivariate Signals: The Power of Adaptive Data Analysis , 2013, IEEE Signal Processing Magazine.

[35]  H. Liang,et al.  Extraction of gastric slow waves from electrogastrograms: Combining independent component analysis and adaptive signal enhancement , 2005, Medical and Biological Engineering and Computing.

[36]  Jacques Lemoine,et al.  Empirical mode decomposition: an analytical approach for sifting process , 2005, IEEE Signal Processing Letters.

[37]  Jie Liang,et al.  What Can Be Measured from Surface Electrogastrography (Computer Simulations) , 1997, Digestive Diseases and Sciences.

[38]  Danilo P. Mandic,et al.  Emd via mEMD: multivariate noise-Aided Computation of Standard EMD , 2013, Adv. Data Sci. Adapt. Anal..

[39]  A. Precioso,et al.  Gastric myoelectrical activity in neonates of different gestational ages by means of electrogastrography. , 2003, Revista do Hospital das Clinicas.

[40]  Jieyun Yin,et al.  Electrogastrography: Methodology, Validation and Applications , 2013, Journal of neurogastroenterology and motility.

[41]  W. Philips,et al.  Adaptive noise removal from biomedical signals using warped polynomials , 1996, IEEE Transactions on Biomedical Engineering.

[42]  Anthony G. Constantinides,et al.  Theory of Digital filter banks Realized via multivariate Empirical mode Decomposition , 2014, Adv. Data Sci. Adapt. Anal..