Activation of the bacterial thermosensor DesK involves a serine zipper dimerization motif that is modulated by bilayer thickness
暂无分享,去创建一个
J. Killian | D. Tieleman | L. Cybulski | J. Ballering | Anastassiia Moussatova | M. E. Inda | D. Vazquez | T. Wassenaar | D. de Mendoza
[1] D. Tieleman,et al. High-Throughput Simulations of Dimer and Trimer Assembly of Membrane Proteins. The DAFT Approach. , 2015, Journal of chemical theory and computation.
[2] M. Chavent,et al. Dimerization of the EphA1 Receptor Tyrosine Kinase Transmembrane Domain: Insights into the Mechanism of Receptor Activation , 2014, Biochemistry.
[3] L. Cybulski,et al. Cerulenin inhibits unsaturated fatty acids synthesis in Bacillus subtilis by modifying the input signal of DesK thermosensor , 2014, MicrobiologyOpen.
[4] Ariel Fernández,et al. A lipid-mediated conformational switch modulates the thermosensing activity of DesK , 2014, Proceedings of the National Academy of Sciences.
[5] M. Sansom,et al. Primary and secondary dimer interfaces of the fibroblast growth factor receptor 3 transmembrane domain: characterization via multiscale molecular dynamics simulations. , 2014, Biochemistry.
[6] D. de Mendoza. Temperature sensing by membranes. , 2014, Annual review of microbiology.
[7] D. Tieleman,et al. Perspective on the Martini model. , 2013, Chemical Society reviews.
[8] D. de Mendoza,et al. Regulation of Bacillus subtilis DesK thermosensor by lipids. , 2013, The Biochemical journal.
[9] Luca Monticelli,et al. Free energy of WALP23 dimer association in DMPC, DPPC, and DOPC bilayers. , 2013, Chemistry and physics of lipids.
[10] Peter M. Kasson,et al. GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit , 2013, Bioinform..
[11] W F Drew Bennett,et al. Improved Parameters for the Martini Coarse-Grained Protein Force Field. , 2013, Journal of chemical theory and computation.
[12] Mark S.P. Sansom,et al. A Helix Heterodimer in a Lipid Bilayer: Prediction of the Structure of an Integrin Transmembrane Domain via Multiscale Simulations , 2011, Structure.
[13] Benjamin A. Hall,et al. Transmembrane Helix Dynamics of Bacterial Chemoreceptors Supports a Piston Model of Signalling , 2011, PLoS Comput. Biol..
[14] Ariel Fernández,et al. Membrane Thickness Cue for Cold Sensing in a Bacterium , 2010, Current Biology.
[15] R. Bourret,et al. Two-component signal transduction. , 2010, Current opinion in microbiology.
[16] Pedro M Alzari,et al. Structural plasticity and catalysis regulation of a thermosensor histidine kinase , 2009, Proceedings of the National Academy of Sciences.
[17] Ann M Stock,et al. Biological insights from structures of two-component proteins. , 2009, Annual review of microbiology.
[18] Philip W Fowler,et al. Helix-helix interactions in membrane proteins: coarse-grained simulations of glycophorin a helix dimerization. , 2008, Biochemistry.
[19] J. Nagle,et al. Temperature dependence of structure, bending rigidity, and bilayer interactions of dioleoylphosphatidylcholine bilayers. , 2008, Biophysical journal.
[20] J. S. Parkinson,et al. In vivo crosslinking methods for analyzing the assembly and architecture of chemoreceptor arrays. , 2007, Methods in enzymology.
[21] S. Fleischer,et al. Two dimensional thin layer chromatographic separation of polar lipids and determination of phospholipids by phosphorus analysis of spots , 1970, Lipids.
[22] D. de Mendoza,et al. The Membrane Fluidity Sensor DesK of Bacillus subtilis Controls the Signal Decay of Its Cognate Response Regulator , 2004, Journal of bacteriology.
[23] Jie Liang,et al. Interhelical hydrogen bonds and spatial motifs in membrane proteins: Polar clamps and serine zippers , 2002, Proteins.
[24] D. Engelman,et al. Motifs of serine and threonine can drive association of transmembrane helices. , 2002, Journal of molecular biology.
[25] L. Cybulski,et al. Molecular basis of thermosensing: a two‐component signal transduction thermometer in Bacillus subtilis , 2001, The EMBO journal.
[26] D. Engelman,et al. Polar residues drive association of polyleucine transmembrane helices , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[27] W. DeGrado,et al. Polar side chains drive the association of model transmembrane peptides. , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[28] N. Sreerama,et al. Estimation of protein secondary structure from circular dichroism spectra: inclusion of denatured proteins with native proteins in the analysis. , 2000, Analytical biochemistry.
[29] J. Nagle,et al. Structure of lipid bilayers. , 2000, Biochimica et biophysica acta.
[30] S H White,et al. How to measure and analyze tryptophan fluorescence in membranes properly, and why bother? , 2000, Analytical biochemistry.
[31] D E Koshland,et al. A piston model for transmembrane signaling of the aspartate receptor. , 1999, Science.
[32] J. Killian,et al. Induction of nonbilayer structures in diacylphosphatidylcholine model membranes by transmembrane alpha-helical peptides: importance of hydrophobic mismatch and proposed role of tryptophans. , 1996, Biochemistry.
[33] C. Pace,et al. How to measure and predict the molar absorption coefficient of a protein , 1995, Protein science : a publication of the Protein Society.
[34] C. Harwood,et al. Molecular biological methods for Bacillus , 1990 .
[35] J. Lakowicz. Principles of fluorescence spectroscopy , 1983 .
[36] J. Spizizen,et al. TRANSFORMATION OF BIOCHEMICALLY DEFICIENT STRAINS OF BACILLUS SUBTILIS BY DEOXYRIBONUCLEATE. , 1958, Proceedings of the National Academy of Sciences of the United States of America.