Binding of nucleotides by proteins

[1]  G. Schulz,et al.  Structure of the complex between adenylate kinase from Escherichia coli and the inhibitor Ap5A refined at 1.9 A resolution. A model for a catalytic transition state. , 1992, Journal of molecular biology.

[2]  G. Schulz,et al.  Induced-fit movements in adenylate kinases. , 1990, Faraday discussions.

[3]  G. Schulz,et al.  Structure of NADH peroxidase from Streptococcus faecalis 10C1 refined at 2.16 A resolution. , 1991, Journal of molecular biology.

[4]  J. Coggins,et al.  Evidence for an ancestral core structure in nucleotide-binding proteins with the type A motif. , 1991, Journal of molecular biology.

[5]  S. Lindquist,et al.  Hspl04 is a highly conserved protein with two essential nucleotide-binding sites , 1991, Nature.

[6]  K. Ogawa Four ATP-binding sites in the midregion of the β heavy chain of dynein , 1991, Nature.

[7]  David J. Asai,et al.  Multiple nucleotide-binding sites in the sequence of dynein β heavy chain , 1991, Nature.

[8]  W. Hol,et al.  Refined crystal structure of lipoamide dehydrogenase from Azotobacter vinelandii at 2.2 A resolution. A comparison with the structure of glutathione reductase. , 1991, Journal of molecular biology.

[9]  J. Zheng,et al.  Crystal structure of the catalytic subunit of cyclic adenosine monophosphate-dependent protein kinase. , 1991, Science.

[10]  T. Steitz,et al.  Structural basis of anticodon loop recognition by glutaminyl-tRNA synthetase , 1991, Nature.

[11]  W. Kabsch,et al.  Structure of the detoxification catalyst mercuric ion reductase from Bacillus sp. strain RC607 , 1991, Nature.

[12]  J. Kuriyan,et al.  Convergent evolution of similar function in two structurally divergent enzymes , 1991, Nature.

[13]  C. Sander,et al.  GTPase domains of ras p21 oncogene protein and elongation factor Tu: analysis of three-dimensional structures, sequence families, and functional sites. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[14]  D. Blow,et al.  Crystal structure of cholesterol oxidase from Brevibacterium sterolicum refined at 1.8 A resolution. , 1991, Journal of molecular biology.

[15]  W. Kabsch,et al.  Similarity of the three-dimensional structures of actin and the ATPase fragment of a 70-kDa heat shock cognate protein. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[16]  C. Kundrot,et al.  Influence of a mutation in the putative nucleotide binding site of the nitrogen regulatory protein NTRC on its positive control function. , 1991, Nucleic acids research.

[17]  W. Lipscomb,et al.  Conformational transition of fructose-1,6-bisphosphatase: structure comparison between the AMP complex (T form) and the fructose 6-phosphate complex (R form). , 1991, Biochemistry.

[18]  F. Cordes,et al.  Evidence for a substrate-binding subsite in ribonuclease T1. Crystal structure of the complex with two guanosines, and model building of the complex with the substrate guanylyl-3',5'-guanosine. , 1991, The Journal of biological chemistry.

[19]  R. L. Cross,et al.  Adenine nucleotide-binding sites on mitochondrial F1-ATPase. Evidence for an adenylate kinase-like orientation of catalytic and noncatalytic sites. , 1991, The Journal of biological chemistry.

[20]  F. S. Mathews,et al.  Spinach glycolate oxidase and yeast flavocytochrome b2 are structurally homologous and evolutionarily related enzymes with distinctly different function and flavin mononucleotide binding. , 1991, Journal of Biological Chemistry.

[21]  K. Douglas,et al.  Evidence for gene duplication forming similar binding folds for NAD(P)H and FAD in pyridine nucleotide‐dependent flavoenzymes , 1991, FEBS letters.

[22]  S H Kim,et al.  Crystal structures at 2.2 A resolution of the catalytic domains of normal ras protein and an oncogenic mutant complexed with GDP. , 1991, Journal of molecular biology.

[23]  K. Diederichs,et al.  The refined structure of the complex between adenylate kinase from beef heart mitochondrial matrix and its substrate AMP at 1.85 A resolution. , 1991, Journal of molecular biology.

[24]  Frank McCormick,et al.  The GTPase superfamily: conserved structure and molecular mechanism , 1991, Nature.

[25]  S. Holbrook,et al.  Structural model of the nucleotide-binding conserved component of periplasmic permeases. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[26]  S H Kim,et al.  Molecular switch for signal transduction: structural differences between active and inactive forms of protooncogenic ras proteins. , 1992, Science.

[27]  T. Steitz,et al.  The crystal structure of the catalytic domain of the site-specific recombination enzyme γδ resolvase at 2.7 Å resolution , 1990, Cell.

[28]  P. R. Sibbald,et al.  The P-loop--a common motif in ATP- and GTP-binding proteins. , 1990, Trends in biochemical sciences.

[29]  Eleanor M. Mitchell,et al.  Structural resemblance between the families of bacterial signal-transduction proteins and of G proteins revealed by graph theoretical techniques. , 1990, Protein engineering.

[30]  W. Kabsch,et al.  Atomic structure of the actin: DNase I complex , 1990, Nature.

[31]  B. Clark,et al.  Structural determination of the functional sites of E. coli elongation factor Tu. , 1990, Biochimica et biophysica acta.

[32]  K. Flaherty,et al.  Three-dimensional structure of the ATPase fragment of a 70K heat-shock cognate protein , 1990, Nature.

[33]  W. Kabsch,et al.  Refined crystal structure of the triphosphate conformation of H‐ras p21 at 1.35 A resolution: implications for the mechanism of GTP hydrolysis. , 1990, The EMBO journal.

[34]  Michael J. Hartshorn,et al.  Structural model of ATP-binding proteing associated with cystic fibrosis, multidrug resistance and bacterial transport , 1990, Nature.

[35]  P Bork,et al.  Recognition of different nucleotide-binding sites in primary structures using a property-pattern approach. , 1990, European journal of biochemistry.

[36]  G. Storz,et al.  Alkyl hydroperoxide reductase from Salmonella typhimurium. Sequence and homology to thioredoxin reductase and other flavoprotein disulfide oxidoreductases. , 1990, The Journal of biological chemistry.

[37]  E. Koonin,et al.  Superfamily of UvrA-related NTP-binding proteins. Implications for rational classification of recombination/repair systems. , 1990, Journal of molecular biology.

[38]  Steven C. Almo,et al.  Time-resolved X-ray crystallographic study of the conformational change in Ha-Ras p21 protein on GTP hydrolysis , 1990, Nature.

[39]  J. Mattick,et al.  Conservation of the regulatory subunit for the Clp ATP-dependent protease in prokaryotes and eukaryotes. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[40]  K. Polyakov,et al.  Comparison of active sites of some microbial ribonucleases: structural basis for guanylic specificity. , 1990, Trends in biochemical sciences.

[41]  J. Stock,et al.  Signal transduction in bacteria , 1990, Nature.

[42]  G. Vriend,et al.  Rubredoxin reductase of Pseudomonas oleovorans. Structural relationship to other flavoprotein oxidoreductases based on one NAD and two FAD fingerprints. , 1990, Journal of molecular biology.

[43]  Philip R. Evans,et al.  Structural basis of the allosteric behaviour of phosphofructokinase , 1990, Nature.

[44]  G. Schulz,et al.  Three-dimensional structure of the complex of guanylate kinase from yeast with its substrate GMP. , 1990, Journal of molecular biology.

[45]  Nigel S. Scrutton,et al.  Redesign of the coenzyme specificity of a dehydrogenase by protein engineering , 1990, Nature.

[46]  P. Karplus,et al.  Substrate binding and catalysis by glutathione reductase as derived from refined enzyme: substrate crystal structures at 2 A resolution. , 1994, Journal of molecular biology.

[47]  G. Schulz,et al.  The switch between two conformations of adenylate kinase. , 1988, Journal of molecular biology.

[48]  A. Goldberg,et al.  Sequence of the lon gene in Escherichia coli. A heat-shock gene which encodes the ATP-dependent protease La. , 1988, The Journal of biological chemistry.

[49]  T. Hunter,et al.  The protein kinase family: conserved features and deduced phylogeny of the catalytic domains. , 1988, Science.

[50]  P. Karplus,et al.  Refined structure of porcine cytosolic adenylate kinase at 2.1 A resolution. , 1988, Journal of molecular biology.

[51]  T. Steitz,et al.  Structure of a complex of catabolite gene activator protein and cyclic AMP refined at 2.5 A resolution. , 1987, Journal of molecular biology.

[52]  P. Karplus,et al.  Refined structure of glutathione reductase at 1.54 A resolution. , 1987, Journal of molecular biology.

[53]  W. Merrick,et al.  GTP-binding domain: three consensus sequence elements with distinct spacing. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[54]  G. Schulz,et al.  The glycine‐rich loop of adenylate kinase forms a giant anion hole , 1986, FEBS letters.

[55]  F. Jurnak Structure of the GDP domain of EF-Tu and location of the amino acids homologous to ras oncogene proteins. , 1985, Science.

[56]  B. Clark,et al.  Structural details of the binding of guanosine diphosphate to elongation factor Tu from E. coli as studied by X‐ray crystallography. , 1985, The EMBO journal.

[57]  R. Wierenga,et al.  INTERACTION OF PYROPHOSPHATE MOIETIES WITH ALPHA-HELIXES IN DINUCLEOTIDE BINDING-PROTEINS , 1985 .

[58]  Wim G. J. Hol,et al.  Predicted nucleotide-binding properties of p21 protein and its cancer-associated variant , 1983, Nature.

[59]  J. Walker,et al.  Distantly related sequences in the alpha‐ and beta‐subunits of ATP synthase, myosin, kinases and other ATP‐requiring enzymes and a common nucleotide binding fold. , 1982, The EMBO journal.

[60]  T. Steitz,et al.  Structure of a complex between yeast hexokinase A and glucose. I. Structure determination and refinement at 3.5 A resolution. , 1980, Journal of molecular biology.

[61]  T. Steitz,et al.  Structure of a complex between yeast hexokinase A and glucose. II. Detailed comparisons of conformation and active site configuration with the native hexokinase B monomer and dimer. , 1980, Journal of molecular biology.

[62]  G. Schulz,et al.  Gene duplication in glutathione reductase. , 1980, Journal of molecular biology.

[63]  Anders Liljas,et al.  2 Evolutionary and Structural Relationships among Dehydrogenases , 1975 .

[64]  G. Schulz,et al.  Topological comparison of adenyl kinase with other proteins , 1974, Nature.

[65]  G. Schulz,et al.  Three-dimensional structure of adenyl kinase , 1974, Nature.