Unnatural Nucleosides with Unusual Base Pairing Properties
暂无分享,去创建一个
[1] V. Davisson,et al. Conformations of nucleoside analogue 1-(2'-deoxy-beta-D-ribofuranosyl)-1,2,4-triazole-3-carboxamide in different DNA sequence contexts. , 2001, Biochemistry.
[2] Shinsuke Sando,et al. Scanning of guanine–guanine mismatches in DNA by synthetic ligands using surface plasmon resonance , 2001, Nature Biotechnology.
[3] Peter G. Schultz,et al. A Novel Copper-Mediated DNA Base Pair , 2000 .
[4] K. Pongracz,et al. A Remarkable Stabilization of Complexes Formed by 2,6-Diaminopurine Oligonucleotide N3′→P5′ Phosphoramidates , 2000, Nucleosides, nucleotides & nucleic acids.
[5] F. Seela,et al. The N(8)-(2'-deoxyribofuranoside) of 8-aza-7-deazaadenine: a universal nucleoside forming specific hydrogen bonds with the four canonical DNA constituents. , 2000, Nucleic acids research.
[6] P. Schultz,et al. Stable and Selective Hybridization of Oligonucleotides with Unnatural Hydrophobic Bases , 2000 .
[7] P. Schultz,et al. Universal bases for hybridization, replication and chain termination. , 2000, Nucleic acids research.
[8] Markus Berger,et al. Efforts toward Expansion of the Genetic Alphabet: Optimization of Interbase Hydrophobic Interactions , 2000 .
[9] Floyd E. Romesberg,et al. Efforts toward the Expansion of the Genetic Alphabet: Information Storage and Replication with Unnatural Hydrophobic Base Pairs , 2000 .
[10] P. Dervan,et al. Chemical approaches to control gene expression. , 2000, Gene expression.
[11] R. Bürli,et al. Sequence-specific DNA recognition by polyamides. , 1999, Current opinion in chemical biology.
[12] Floyd E. Romesberg,et al. Efforts toward Expansion of the Genetic Alphabet: DNA Polymerase Recognition of a Highly Stable, Self-Pairing Hydrophobic Base , 1999 .
[13] C. Leumann,et al. Selective recognition of a C-G base-pair in the parallel DNA triple-helical binding motif. , 1999, Bioorganic & medicinal chemistry letters.
[14] Kentaro Tanaka,et al. Synthesis of a Novel Nucleoside for Alternative DNA Base Pairing through Metal Complexation. , 1999, The Journal of organic chemistry.
[15] Eric T. Kool,et al. A specific partner for abasic damage in DNA , 1999, Nature.
[16] T. Brown,et al. 5-(1-propargylamino)-2'-deoxyuridine (UP): a novel thymidine analogue for generating DNA triplexes with increased stability. , 1999, Nucleic acids research.
[17] J. Day,et al. Nucleotide analogs and new buffers improve a generalized method to enrich for low abundance mutations. , 1999, Nucleic acids research.
[18] D. Gowers,et al. Towards mixed sequence recognition by triple helix formation. , 1999, Nucleic acids research.
[19] J. Day,et al. Nucleotide analogs facilitate base conversion with 3' mismatch primers. , 1999, Nucleic acids research.
[20] E. Kool,et al. Minor Groove Interactions between Polymerase and DNA: More Essential to Replication than Watson-Crick Hydrogen Bonds? , 1999, Journal of the American Chemical Society.
[21] M. Durand,et al. The stability of duplexes involving AT and/or G4EtC base pairs is not dependent on their AT/G4EtC ratio content. Implication for DNA sequencing by hybridization. , 1998, Nucleic acids research.
[22] P. Herdewijn,et al. Hybridization properties of base-modified oligonucleotides within the double and triple helix motif , 1998 .
[23] V. Davisson,et al. Exploratory studies on azole carboxamides as nucleobase analogs: thermal denaturation studies on oligodeoxyribonucleotide duplexes containing pyrrole-3-carboxamide. , 1998, Nucleic acids research.
[24] D. M. Brown,et al. Polymerase recognition of synthetic oligodeoxyribonucleotides incorporating degenerate pyrimidine and purine bases. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[25] K. Guckian,et al. Structure and Base Pairing Properties of a Replicable Nonpolar Isostere for Deoxyadenosine. , 1998, The Journal of organic chemistry.
[26] A. Matsuda,et al. Nucleosides and nucleotides. 170. Synthesis and properties of oligodeoxynucleotides containing 5-[N-[2-[N,N-bis(2-aminoethyl)- amino]ethyl]carbamoyl]-2'-deoxyuridine and 5-[N-[3-[N,N-bis(3-aminopropyl) amino]propyl]carbamoyl]-2'-deoxyuridine. , 1998, Bioconjugate chemistry.
[27] E. Kool. Replication of non‐hydrogen bonded bases by DNA polymerases: A mechanism for steric matching , 1998, Biopolymers.
[28] S. Neidle,et al. Recognition of GC base pairs by triplex forming oligonucleotides containing nucleosides derived from 2-aminopyridine. , 1997, Nucleic acids research.
[29] V. Davisson,et al. Template directed incorporation of nucleotide mixtures using azole-nucleobase analogs. , 1997, Nucleic Acids Research.
[30] E. Kool,et al. A thymidine triphosphate shape analog lacking Watson-Crick pairing ability is replicated with high sequence selectivity. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[31] D. Bergstrom,et al. Comparison of the base pairing properties of a series of nitroazole nucleobase analogs in the oligodeoxyribonucleotide sequence 5'-d(CGCXAATTYGCG)-3'. , 1997, Nucleic acids research.
[32] Lloyd M. Smith,et al. Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridization , 1997, Nature Biotechnology.
[33] D. M. Brown,et al. The mechanism of mutation induction by a hydrogen bond ambivalent, bicyclic N4-oxy-2'-deoxycytidine in Escherichia coli. , 1997, Nucleic acids research.
[34] E. Kool,et al. Difluorotoluene, a Nonpolar Isostere for Thymine, Codes Specifically and Efficiently for Adenine in DNA Replication. , 1997, Journal of the American Chemical Society.
[35] D. Bergstrom,et al. The synthesis and stability of oligodeoxyribonucleotides containing the deoxyadenosine mimic 1-(2'-deoxy-beta-D-ribofuranosyl)imidazole-4-carboxamide. , 1997, Nucleic acids research.
[36] K. Guckian,et al. Highly Precise Shape Mimicry by a Difluorotoluene Deoxynucleoside, a Replication-Competent Substitute for Thymidine. , 1997, Angewandte Chemie.
[37] J. Behr,et al. Towards a general triple helix mediated DNA recognition scheme , 1997 .
[38] W. Richards,et al. Novel Hoogsteen-like bases for configurational recognition of the T-A base pair by DNA triplex formation. , 1998, Biopolymers.
[39] E. Lukhtanov,et al. Oligonucleotides containing 2-aminoadenine and 2-thiothymine act as selectively binding complementary agents. , 1996, Biochemistry.
[40] Chin-Yi Huang,et al. Triplex formation by oligonucleotides containing novel deoxycytidine derivatives [published erratum appears in Nucleic Acids Res 1997 Sep 15;25(18): following 3750] , 1996, Nucleic Acids Res..
[41] D. Bergstrom,et al. DESIGN AND SYNTHESIS OF HETEROCYCLIC CARBOXAMIDES AS NATURAL NUCLEIC ACID BASE MIMICS , 1996 .
[42] P. Marlière,et al. Construction of a self-complementary nucleoside from deoxyguanosine. , 1996, Comptes rendus de l'Academie des sciences. Serie III, Sciences de la vie.
[43] F. Barany,et al. Improving the fidelity of Thermus thermophilus DNA ligase. , 1996, Nucleic acids research.
[44] David Loakes,et al. 3-Nitropyrrole and 5-nitroindole as universal bases in primers for DNA sequencing and PCR , 1995, Nucleic Acids Res..
[45] S. Benner,et al. Recognition by viral and cellular DNA polymerases of nucleosides bearing bases with nonstandard hydrogen bonding patterns. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[46] E. Kool,et al. Hydrophobic, Non-Hydrogen-Bonding Bases and Base Pairs in DNA. , 1995, Journal of the American Chemical Society.
[47] P. Andrews,et al. SYNTHESIS, STRUCTURE, AND DEOXYRIBONUCLEIC ACID SEQUENCING WITH A UNIVERSAL NUCLEOSIDE : 1-(2'-DEOXY-BETA -D-RIBOFURANOSYL)-3-NITROPYRROLE , 1995 .
[48] D. M. Brown,et al. 5-Nitroindole as an universal base analogue. , 1994, Nucleic acids research.
[49] S. Benner,et al. Nonstandard Hydrogen Bonding in Duplex Oligonucleotides. The Base Pair between an Acceptor-Donor-Donor Pyrimidine Analog and a Donor-Acceptor-Acceptor Purine Analog , 1994 .
[50] S A Benner,et al. Enzymatic recognition of the base pair between isocytidine and isoguanosine. , 1993, Biochemistry.
[51] R. Eritja,et al. Ionization of bromouracil and fluorouracil stimulates base mispairing frequencies with guanine. , 1993, The Journal of biological chemistry.
[52] B. Froehler,et al. Antisense gene inhibition by oligonucleotides containing C-5 propyne pyrimidines. , 1993, Science.
[53] B. Froehler,et al. Oligonucleotide-mediated triple helix formation using an N3-protonated deoxycytidine analog exhibiting pH-independent binding within the physiological range. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[54] P. Dervan,et al. Design of a nonnatural deoxyribonucleoside for recognition of GC base pairs by oligonucleotide-directed triple helix formation , 1992 .
[55] D. M. Brown,et al. Synthesis and duplex stability of oligonucleotides containing adenine-guanine analogues. , 1992, Carbohydrate research.
[56] E. Ohtsuka,et al. NMR studies for identification of dI:dG mismatch base-pairing structure in DNA. , 1991, Nucleic acids research.
[57] D. M. Brown,et al. The structure and application of oligodeoxyribonucleotides containing modified, degenerate bases. , 1991, Nucleic Acids Symposium Series.
[58] G. Fazakerley,et al. An NMR structural study of deaminated base pairs in DNA. , 1990, Nucleic acids research.
[59] Steven A. Benner,et al. Enzymatic incorporation of a new base pair into DNA and RNA extends the genetic alphabet , 1990, Nature.
[60] G. Leonard,et al. Refined crystal structure of an octanucleotide duplex with I.T. mismatched base pairs. , 1993, Nucleic acids research.
[61] D. M. Brown,et al. Synthesis and duplex stability of oligonucleotides containing cytosine-thymine analogues. , 1989, Nucleic acids research.
[62] E. Ohtsuka,et al. Synthesis and Thermal Stability of Dodecadeoxyribonucleotides Containing Deoxyinosine Pairing with Four Major Bases , 1989 .
[63] A. Wang,et al. 5-Fluorodeoxyuridine as an alternative to the synthesis of mixed hybridization probes for the detection of specific gene sequences. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[64] W. Hunter,et al. Inosine.adenine base pairs in a B-DNA duplex. , 1987, Nucleic acids research.
[65] E. Ohtsuka,et al. Identification of I:A mismatch base-pairing structure in DNA. , 1987, The Journal of biological chemistry.
[66] R. Eritja,et al. Synthesis and properties of oligonucleotides containing 2'-deoxynebularine and 2'-deoxyxanthosine. , 1986, Nucleic acids research.
[67] K. Kaiser,et al. Phosphoramidites of base-modified 2'-deoxyinosine isosteres and solid-phase synthesis of d(GCI*CGC) oligomers containing an ambiguous base. , 1986, Nucleic acids research.
[68] I. Tinoco,et al. Base pairing involving deoxyinosine: implications for probe design. , 1985, Nucleic acids research.
[69] E. Ohtsuka,et al. Synthesis and hybridization of dodecadeoxyribonucleotides containing a fluorescent pyridopyrimidine deoxynucleoside. , 1985, Nucleic acids research.
[70] E. Ohtsuka,et al. An alternative approach to deoxyoligonucleotides as hybridization probes by insertion of deoxyinosine at ambiguous codon positions. , 1985, The Journal of biological chemistry.
[71] S. Neidle,et al. Synthesis and biophysical studies of short oligodeoxynucleotides with novel modifications: a possible approach to the problem of mixed base oligodeoxynucleotide synthesis. , 1984, Nucleic acids research.