Piecewise linear fitting in dynamic micro-CT

Abstract Piecewise linear fitting, the technique proposed in this paper, performs data reduction on a large dynamic CT dataset and it already takes a step in the direction of the data analysis and characterization that needs to be performed afterwards. In addition, it drastically improves the signal-to-noise ratio. This is demonstrated on two complementary samples: a Bentheimer sandstone and a pharmaceutical tablet. This technique is developed for dynamic high-resolution CT scanning or 4D-μCT, a tool to study dynamic processes in situ on the micro-scale. We propose to start from the low quality reconstruction and perform a piecewise linear fit in the time direction for each voxel. This effectively uses the nearby temporal information, regardless of the nature of the dynamic process, without introducing spatial correlation.

[1]  D. Harwood-Nash,et al.  Computed tomography of ancient Egyptian mummies. , 1979, Journal of computer assisted tomography.

[2]  G. Gullberg,et al.  4D maximum a posteriori reconstruction in dynamic SPECT using a compartmental model-based prior. , 2001, Physics in medicine and biology.

[3]  Benoit Recur,et al.  Bayesian approach to time-resolved tomography. , 2015, Optics express.

[4]  Keshu Wan,et al.  In situ compressive damage of cement paste characterized by lab source X-ray computer tomography , 2013 .

[5]  A. Savitzky,et al.  Smoothing and Differentiation of Data by Simplified Least Squares Procedures. , 1964 .

[6]  Thomas De Schryver Fast imaging in non-standard X-ray computed tomography geometries , 2017 .

[7]  A. Kak,et al.  Simultaneous Algebraic Reconstruction Technique (SART): A Superior Implementation of the Art Algorithm , 1984, Ultrasonic imaging.

[8]  Veerle Cnudde,et al.  Real‐time visualization of Haines jumps in sandstone with laboratory‐based microcomputed tomography , 2015 .

[9]  C. Celorio,et al.  Characterization by computed X-ray tomography of the evolution of the pore structure of a dolomite rock during freeze-thaw cyclic tests , 1999 .

[10]  Veerle Cnudde,et al.  The microstructure of capsule containing self-healing materials: A micro-computed tomography study , 2016 .

[11]  Andrew Kingston,et al.  DYNAMIC X-RAY MICRO-TOMOGRAPHY FOR REAL TIME IMAGING OF DRAINAGE AND IMBIBITION PROCESSES AT THE PORE SCALE , 2011 .

[12]  Veerle Cnudde,et al.  Recent progress in X-ray CT as a geosciences tool , 2006 .

[13]  I. Buvat,et al.  Iterative Kinetic Parameter Estimation within Fully 4D PET Image Reconstruction , 2006, 2006 IEEE Nuclear Science Symposium Conference Record.

[14]  T. De Beer,et al.  Hydrophilic thermoplastic polyurethanes for the manufacturing of highly dosed oral sustained release matrices via hot melt extrusion and injection molding. , 2016, International journal of pharmaceutics.

[15]  Eric Todd Quinto,et al.  Characterization and reduction of artifacts in limited angle tomography , 2013 .

[16]  Manuel Dierick,et al.  A novel beam hardening correction method requiring no prior knowledge, incorporated in an iterative reconstruction algorithm , 2012 .

[17]  L. Feldkamp,et al.  Practical cone-beam algorithm , 1984 .

[18]  W. Cleveland,et al.  Locally Weighted Regression: An Approach to Regression Analysis by Local Fitting , 1988 .

[19]  Eyad Masad,et al.  CHARACTERIZATION OF AIR VOID DISTRIBUTION IN ASPHALT MIXES USING X-RAY COMPUTED TOMOGRAPHY , 2002 .

[20]  L. Wong,et al.  Cracking Processes in Rock-Like Material Containing a Single Flaw Under Uniaxial Compression: A Numerical Study Based on Parallel Bonded-Particle Model Approach , 2011, Rock Mechanics and Rock Engineering.

[21]  Kees Joost Batenburg,et al.  Region based 4D tomographic image reconstruction: Application to cardiac x-ray CT , 2015, 2015 IEEE International Conference on Image Processing (ICIP).

[22]  Kees Joost Batenburg,et al.  An Iterative CT Reconstruction Algorithm for Fast Fluid Flow Imaging , 2015, IEEE Transactions on Image Processing.

[23]  H. Yamada,et al.  Computed tomography for measuring annual rings of a live tree , 1983, Proceedings of the IEEE.

[24]  Jan Sijbers,et al.  Local attenuation curve optimization framework for high quality perfusion maps in low-dose cerebral perfusion CT. , 2016, Medical physics.

[25]  S. A. McDonald,et al.  Employing temporal self-similarity across the entire time domain in computed tomography reconstruction , 2015, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences.

[27]  G. Wahba Smoothing noisy data with spline functions , 1975 .

[28]  Veerle Cnudde,et al.  Neutron radiography and X-ray computed tomography for quantifying weathering and water uptake processes inside porous limestone used as building material , 2014 .

[29]  T Varslot,et al.  High-resolution helical cone-beam micro-CT with theoretically-exact reconstruction from experimental data. , 2011, Medical physics.

[30]  Philip J. Withers,et al.  4-D imaging of sub-second dynamics in pore-scale processes using real-time synchrotron X-ray tomography , 2016 .

[31]  Veerle Cnudde,et al.  Fast laboratory-based micro-computed tomography for pore-scale research: Illustrative experiments and perspectives on the future , 2016 .

[32]  L Axel,et al.  Dynamic computed tomography of the brain: techniques, data analysis, and applications. , 1981, AJR. American journal of roentgenology.

[33]  S. Elkoun,et al.  Individual pore and interconnection size analysis of macroporous ceramic scaffolds using high-resolution X-ray tomography , 2016 .

[34]  Avinash C. Kak,et al.  Principles of computerized tomographic imaging , 2001, Classics in applied mathematics.

[35]  Benoit Recur,et al.  Improving dynamic tomography, through Maximum a posteriori estimation , 2014, Optics & Photonics - Optical Engineering + Applications.

[36]  Kees Joost Batenburg,et al.  DART: A Practical Reconstruction Algorithm for Discrete Tomography , 2011, IEEE Transactions on Image Processing.

[37]  Veerle Cnudde,et al.  Recent Micro-CT Scanner Developments at UGCT , 2014 .

[38]  E. Landis,et al.  X-ray microtomography , 2010 .

[39]  Habib Zaidi,et al.  Four-dimensional (4D) image reconstruction strategies in dynamic PET: beyond conventional independent frame reconstruction. , 2009, Medical physics.

[40]  George Zentai X-ray imaging for homeland security , 2010 .

[41]  Veerle Cnudde,et al.  X-ray micro-CT used for the localization of water repellents and consolidants inside natural building stones , 2004 .

[42]  Max A. Viergever,et al.  Noise Reduction in Computed Tomography Scans Using 3-D Anisotropic Hybrid Diffusion With Continuous Switch , 2009, IEEE Transactions on Medical Imaging.

[43]  A. Sheppard,et al.  Local diffusion coefficient measurements in shale using dynamic micro-computed tomography , 2017 .

[44]  William R B Lionheart,et al.  4D-CT reconstruction with unified spatial-temporal patch-based regularization , 2015 .