Metabolic disassembler for understanding and predicting the biosynthetic units of natural products
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Kenichi Tanaka | Kimito Funatsu | Masaaki Kotera | Kohei Amano | Tsubasa Matsumoto | Masaaki Kotera | K. Funatsu | Kenichi Tanaka | Kohei Amano | Tsubasa Matsumoto
[1] Yasuo Tabei,et al. Metabolome-scale de novo pathway reconstruction using regioisomer-sensitive graph alignments , 2015, Bioinform..
[2] M. Wink. Medicinal Natural Products. A Biosynthetic Approach , 2002 .
[3] David Rogers,et al. Extended-Connectivity Fingerprints , 2010, J. Chem. Inf. Model..
[4] Akhil Kumar,et al. Pathway design using de novo steps through uncharted biochemical spaces , 2018, Nature Communications.
[5] Stephen R. Heller,et al. InChI - the worldwide chemical structure identifier standard , 2013, Journal of Cheminformatics.
[6] Hiroyuki Ogata,et al. KEGG: Kyoto Encyclopedia of Genes and Genomes , 1999, Nucleic Acids Res..
[7] Aric Hagberg,et al. Exploring Network Structure, Dynamics, and Function using NetworkX , 2008, Proceedings of the Python in Science Conference.
[8] Susumu Goto,et al. PathPred: an enzyme-catalyzed metabolic pathway prediction server , 2010, Nucleic Acids Res..
[9] David Weininger,et al. SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules , 1988, J. Chem. Inf. Comput. Sci..
[10] S. Ōmura,et al. Avermectins, New Family of Potent Anthelmintic Agents: Producing Organism and Fermentation , 1979, Antimicrobial Agents and Chemotherapy.
[11] A. Fleming,et al. Classics in infectious diseases: on the antibacterial action of cultures of a penicillium, with special reference to their use in the isolation of B. influenzae by Alexander Fleming, Reprinted from the British Journal of Experimental Pathology 10:226-236, 1929. , 1980, Reviews of infectious diseases.
[12] Marc Parizeau,et al. DEAP: evolutionary algorithms made easy , 2012, J. Mach. Learn. Res..
[13] A. Fleming,et al. On the antibacterial action of cultures of a penicillium, with special reference to their use in the isolation of B. influenzæ , 1929 .
[14] Pablo Carbonell,et al. Molecular structures enumeration and virtual screening in the chemical space with RetroPath2.0 , 2017, bioRxiv.
[15] Suxia Han,et al. fied, along with their associated protein‐protein interaction networks and Kyoto Encyclopedia of Genes and Genomes , 2019 .
[16] Yu Tian,et al. PrecursorFinder: a customized biosynthetic precursor explorer , 2019, Bioinform..
[17] 市瀬 浩志. Medicinal Natural Products A Biosynthetic Approach (3rd Edition), Paul M.Dewick著, John Wiley&Sons, B5変型, 550頁, $170.00 , 2009 .
[18] Pablo Carbonell,et al. XTMS: pathway design in an eXTended metabolic space , 2014, Nucleic Acids Res..
[19] Christoph Steinbeck,et al. Rhea—a manually curated resource of biochemical reactions , 2011, Nucleic Acids Res..
[20] Tae Yong Kim,et al. ReactPRED: a tool to predict and analyze biochemical reactions , 2016, Bioinform..
[21] Soha Hassoun,et al. Probabilistic pathway construction. , 2011, Metabolic engineering.
[22] Pablo Carbonell,et al. RetroPath2.0: A retrosynthesis workflow for metabolic engineers. , 2018, Metabolic engineering.