An Efficient Level Set Speed Function Based on Temperature Changes for Brain Tumor Segmentation

In clinical routine, accurate segmentation of brain tumors from Magnetic Resonance Images (MRI) plays an important role in diagnostic; it is a challenging and difficult task as brain tumors have various appearance properties. In this study, a modified level set speed function for accurate brain tumor segmentation applied on thermal images to reinforce brain tumors segmentation using MRI is presented. Tumor cells have high temperature compared to healthy cells, due to the high metabolic activity of abnormal cells. To calculate the thermal image we have used Pennes BioHeat Transfer Equation (PBHTE) resolved using Finite Difference Method (FDM). By analyzing the tumor thermal profile, the temperature is higher in the tumor center and is reduced as we move to the tumor borders; we have used this physical phenomenon in level set function for tumor segmentation. The proposed approach is tested in synthetic MRI images containing tumors with different volumes and locations. The obtained results showed that \( 10.29\,\% \) of brain tumor segmented correctly by level set method in the thermal image as a tumor part, contrarily in T1 which is segmented as healthy tissue, the same for T1c and Flair with \( 4.32\,\% \) and \( 22.58\,\% \) respectively. Therefore, the temperature can play an important role to improve the accuracy of brain tumor segmentation in MRI.

[1]  A. Raihani,et al.  3D brain tumor localization and parameter estimation using thermographic approach on GPU. , 2018, Journal of thermal biology.

[2]  A. Raihani,et al.  Thermal effect analysis of brain tumor on simulated T1-weighted MRI images , 2018, 2018 International Conference on Intelligent Systems and Computer Vision (ISCV).

[3]  Peter Dechent,et al.  Contrast‐driven approach to intracranial segmentation using a combination of T2‐ and T1‐weighted 3D MRI data sets , 2006, Journal of magnetic resonance imaging : JMRI.

[4]  Liu Jin,et al.  A survey of MRI-based brain tumor segmentation methods , 2014 .

[5]  Christopher Joseph Pal,et al.  A Convolutional Neural Network Approach to Brain Tumor Segmentation , 2015, Brainles@MICCAI.

[6]  Guido Gerig,et al.  Simulation of brain tumors in MR images for evaluation of segmentation efficacy , 2009, Medical Image Anal..

[7]  Nooshin Nabizadeh,et al.  Histogram-based gravitational optimization algorithm on single MR modality for automatic brain lesion detection and segmentation , 2014, Expert Syst. Appl..

[8]  Ross T. Whitaker,et al.  GIST: an interactive, GPU-based level set segmentation tool for 3D medical images , 2004, Medical Image Anal..

[9]  Bostjan Likar,et al.  Robust Estimation of Unbalanced Mixture Models on Samples with Outliers , 2015, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[10]  James A. Sethian,et al.  Level Set Methods and Fast Marching Methods , 1999 .

[11]  Afsaneh Mojra,et al.  Finite element modeling of haptic thermography: A novel approach for brain tumor detection during minimally invasive neurosurgery. , 2015, Journal of thermal biology.

[12]  Ross T. Whitaker,et al.  A Streaming Narrow-Band Algorithm: Interactive Computation and Visualization of Level Sets , 2004, IEEE Trans. Vis. Comput. Graph..

[13]  S. Bauer,et al.  A survey of MRI-based medical image analysis for brain tumor studies , 2013, Physics in medicine and biology.

[14]  J. Sethian,et al.  Fronts propagating with curvature-dependent speed: algorithms based on Hamilton-Jacobi formulations , 1988 .

[15]  Afsaneh Mojra,et al.  Intraoperative thermal imaging of brain tumors using a haptic-thermal robot with application in minimally invasive neurosurgery , 2015 .

[16]  Nelly Gordillo,et al.  State of the art survey on MRI brain tumor segmentation. , 2013, Magnetic resonance imaging.

[17]  Demetri Terzopoulos,et al.  Snakes: Active contour models , 2004, International Journal of Computer Vision.

[18]  D. Louis Collins,et al.  Twenty New Digital Brain Phantoms for Creation of Validation Image Data Bases , 2006, IEEE Transactions on Medical Imaging.

[19]  E. Wissler,et al.  Pennes' 1948 paper revisited. , 1998, Journal of applied physiology.

[20]  Linda Knutsson,et al.  Automatic brain segmentation using fractional signal modeling of a multiple flip angle, spoiled gradient-recalled echo acquisition , 2014, Magnetic Resonance Materials in Physics, Biology and Medicine.

[21]  H. H. Pennes Analysis of tissue and arterial blood temperatures in the resting human forearm. 1948. , 1948, Journal of applied physiology.