Monitoring utilizations of amino acids and vitamins in culture media and Chinese hamster ovary cells by liquid chromatography tandem mass spectrometry.

Monitoring amino acids and vitamins is important for understanding human health, food nutrition and the culture of mammalian cells used to produce therapeutic proteins in biotechnology. A method including ion pairing reversed-phase liquid chromatography with tandem mass spectrometry was developed and optimized to quantify 21 amino acids and 9 water-soluble vitamins in Chinese hamster ovary (CHO) cells and culture media. By optimizing the chromatographic separation, scan time, monitoring time window, and sample preparation procedure, and using isotopically labeled (13)C, (15)N and (2)H internal standards, low limits of quantitation (≤0.054 mg/L), good precision (<10%) and good accuracy (100±10%) were achieved for nearly all the 30 compounds. Applying this method to CHO cell extracts, statistically significant differences in the metabolite levels were measured between two cell lines originated from the same host, indicating differences in genetic makeup or metabolic activities and nutrient supply levels in the culture media. In a fed-batch process of manufacturing scale bioreactors, two distinguished trends for changes in amino acid concentrations were identified in response to feeding. Ten essential amino acids showed a zigzag pattern with maxima at the feeding days, and 9 non-essential amino acids displayed a smoothly changing profile as they were mainly products of cellular metabolism. Five of 9 vitamins accumulated continuously during the culture period, suggesting that they were fed in access. The method serves as an effective tool for the development and optimization of mammalian cell cultures.

[1]  Royston Goodacre,et al.  Evaluation of extraction processes for intracellular metabolite profiling of mammalian cells: matching extraction approaches to cell type and metabolite targets , 2010, Metabolomics.

[2]  Ji Hong Determination of amino acids by precolumn derivatization with 6-aminoquinolyl-N-hydroxysuccinimidyl carbamate and high performance liquid chromatography with ultraviolet detection , 1994 .

[3]  R. Radi,et al.  Pathways of peroxynitrite oxidation of thiol groups. , 1997, The Biochemical journal.

[4]  W. Weinmann,et al.  Ion suppression effects in liquid chromatography-electrospray-ionisation transport-region collision induced dissociation mass spectrometry with different serum extraction methods for systematic toxicological analysis with mass spectra libraries. , 2002, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

[5]  Wenyun Lu,et al.  Separation and quantitation of water soluble cellular metabolites by hydrophilic interaction chromatography-tandem mass spectrometry. , 2006, Journal of chromatography. A.

[6]  Gyun Min Lee,et al.  CHO cells in biotechnology for production of recombinant proteins: current state and further potential , 2012, Applied Microbiology and Biotechnology.

[7]  John C Lindon,et al.  Use of relaxation-edited one-dimensional and two dimensional nuclear magnetic resonance spectroscopy to improve detection of small metabolites in blood plasma. , 2004, Analytical biochemistry.

[8]  A. Seymour,et al.  High-throughput and multiplexed LC/MS/MRM method for targeted metabolomics. , 2010, Analytical chemistry.

[9]  Yiping Ren,et al.  Simultaneous determination of four water-soluble vitamins in fortified infant foods by ultra-performance liquid chromatography coupled with triple quadrupole mass spectrometry. , 2008, Journal of chromatographic science.

[10]  Oliver Fiehn,et al.  Extending the breadth of metabolite profiling by gas chromatography coupled to mass spectrometry. , 2008, Trends in analytical chemistry : TRAC.

[11]  M. Suman,et al.  Application of a liquid chromatography tandem mass spectrometry method to the analysis of water-soluble vitamins in Italian pasta , 2005 .

[12]  J. Heijnen,et al.  Quantitative analysis of the microbial metabolome by isotope dilution mass spectrometry using uniformly 13C-labeled cell extracts as internal standards. , 2005, Analytical biochemistry.

[13]  T. Ferenci,et al.  Effect of Slow Growth on Metabolism of Escherichia coli, as Revealed by Global Metabolite Pool (“Metabolome”) Analysis , 1998, Journal of bacteriology.

[14]  W. Horwitz,et al.  A Heuristic Derivation of the Horwitz Curve , 1997 .

[15]  Jamey D. Young,et al.  Peak antibody production is associated with increased oxidative metabolism in an industrially relevant fed‐batch CHO cell culture , 2013, Biotechnology and bioengineering.

[16]  K. Yamamoto,et al.  Amino acid and vitamin requirements in mammalian cultured cells , 1993, Amino Acids.

[17]  C. Horváth,et al.  Kinetic study on cis-trans proline isomerization by high-performance liquid chromatography , 1984 .

[18]  D. Robinson,et al.  Development of Animal-free, Protein-Free and Chemically-Defined Media for NS0 Cell Culture , 2005, Cytotechnology.

[19]  K. Polizzi,et al.  Comparative analysis of amino acid metabolism and transport in CHO variants with different levels of productivity. , 2013, Journal of biotechnology.

[20]  C. Wittmann,et al.  Impact of the cold shock phenomenon on quantification of intracellular metabolites in bacteria. , 2004, Analytical biochemistry.

[21]  J. Donoso,et al.  DFT studies on Schiff base formation of vitamin B6 analogues. Reaction between a pyridoxamine-analogue and carbonyl compounds. , 2010, The journal of physical chemistry. A.

[22]  S. Sabbah,et al.  Study of the cis-trans isomerization of enalapril by reversed-phase liquid chromatography. , 2000, Journal of chromatography. A.

[23]  Zhongqi Zhang,et al.  Metabolomics analysis of soy hydrolysates for the identification of productivity markers of mammalian cells for manufacturing therapeutic proteins , 2015, Biotechnology progress.

[24]  Leonard A. Smith,et al.  Developement of serum-free media in CHO-DG44 cells using a central composite statistical design , 2007, Cytotechnology.

[25]  Christophe Junot,et al.  Liquid chromatography-mass spectrometry and 15N metabolic labeling for quantitative metabolic profiling. , 2005, Analytical chemistry.

[26]  E Vuori,et al.  Simultaneous screening for 238 drugs in blood by liquid chromatography-ion spray tandem mass spectrometry with multiple-reaction monitoring. , 2003, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

[27]  R. Obeid,et al.  Vitamins in the prevention of human diseases , 2010 .

[28]  L. Leuthold,et al.  Triple quadrupole linear ion trap mass spectrometer for the analysis of small molecules and macromolecules. , 2004, Journal of mass spectrometry : JMS.

[29]  F. Wurm Production of recombinant protein therapeutics in cultivated mammalian cells , 2004, Nature Biotechnology.