Vibrational Circular Dichroism Detects Symmetry Breaking due to Conformational Mobility in C2-Symmetry Chiral Molecules and Provides Further Insight into Inter-Chromophoric Interactions

Bicyclo[3.3.1]nonane-2,6-dione (1) and bicyclo[3.3.1]nona-3,7-diene-2,6-dione (2) have been examined by vibrational circular dichroism (VCD), which, as for most C2-symmetric systems, exhibits strong VCD signals. In the case of 2, VCD signals are stronger and sharper with several bisignate doublets; for 1, signals are less intense and broader. The VCD and IR spectra are excellently predicted by DFT calculations: only one conformer is present for 2, while for 1, three main conformers, related through concerted skeleton torsional motions are present (two of them being interchanged by C2-rotation). The VCD spectrum shows specific features for the different conformers, such that correct population factors are crucial for reproducing experimental data. Also, the TD-DFT prediction of ECD (electronic circular dichroism) spectra is good. By comparing the spectroscopic signature of the two molecules (both VCD and ECD) and by careful analysis of the theoretical results, the role of the C=C double bond in compound (2) is evidenced. The double bond contributes toward enhancing the CD response both electronically and vibrationally.

[1]  G. Longhi,et al.  Harmonic and anharmonic features of IR and NIR absorption and VCD spectra of chiral 4-X-[2.2]paracyclophanes. , 2007, The journal of physical chemistry. A.

[2]  G. Mazzeo,et al.  Bicamphor: a prototypic molecular system to investigate vibrational excitons. , 2015, The journal of physical chemistry. A.

[3]  M. Tommasini,et al.  The connection between robustness angles and dissymmetry factors in vibrational circular dichroism spectra , 2015 .

[4]  S. Lepri,et al.  Importance of C*-H based modes and large amplitude motion effects in vibrational circular dichroism spectra: the case of the chiral adduct of dimethyl fumarate and anthracene. , 2014, The journal of physical chemistry. A.

[5]  P. Polavarapu,et al.  Enhancement of the chiroptical response of α-amino acids via N-substitution for molecular structure determination using vibrational circular dichroism. , 2020, Chirality.

[6]  M. Paddon-Row On the origin of transannular interactions in diketones and methylene-ketones, as detected by 13C N.M.R. spectroscopy: An ab initio MO study , 1994 .

[7]  C. Rosini,et al.  A vibrational circular dichroism approach to the determination of the absolute configuration of flexible and transparent molecules: fluorenone ketals of 1,n-diols. , 2010, Physical chemistry chemical physics : PCCP.

[8]  V. Barone,et al.  Interplay of Stereoelectronic and Vibrational Modulation Effects in Tuning the UPS Spectra of Unsaturated Hydrocarbon Cage Compounds , 2020, Journal of chemical theory and computation.

[9]  V. P. Nicu Revisiting an old concept: the coupled oscillator model for VCD. Part 2: implications of the generalised coupled oscillator mechanism for the VCD robustness concept. , 2016, Physical chemistry chemical physics : PCCP.

[10]  V. Barone,et al.  Toward Fully Unsupervised Anharmonic Computations Complementing Experiment for Robust and Reliable Assignment and Interpretation of IR and VCD Spectra from Mid-IR to NIR: The Case of 2,3-Butanediol and trans-1,2-Cyclohexanediol , 2020, The journal of physical chemistry. A.

[11]  H. Gerlach Racematspaltung und Bestimmung der absoluten Konfiguration von 2, 6-disubstituierten Bicyclo [3.3.1]nonanen , 1978 .

[12]  R. Hoffmann,et al.  Benzynes, dehydroconjugated molecules, and the interaction of orbitals separated by a number of intervening sigma bonds , 1968 .

[13]  G. Mazzeo,et al.  Testing the vibrational exciton and the local mode models on the instructive cases of dicarvone, dipinocarvone, and dimenthol vibrational circular dichroism spectra. , 2020, Chirality.

[14]  G. Mazzeo,et al.  pH Dependent Chiroptical Properties of (1R,2R)- and (1S,2S)-trans-Cyclohexane Diesters and Diamides from VCD, ECD, and CPL Spectroscopy. , 2016, The journal of physical chemistry. B.

[15]  A. Žilinskas,et al.  Determination of the absolute configuration of bicyclo[3.3.1]nonane-2,7-dione by circular dichroism spectroscopy and chemical correlation. , 2001, Chirality.

[16]  G. Zerbi,et al.  Conformational dependence of Fermi resonances in n-alkanes. Raman spectrum of 1,1,1,4,4,4-hexadeuteriobutane , 1984 .

[17]  G. Longhi,et al.  Vibrational Optical Activity of BODIPY Dimers: The Role of Magnetic-Electric Coupling in Vibrational Excitons. , 2017, The journal of physical chemistry. A.

[18]  G. Longhi,et al.  Vibrational and electronic circular dichroism of dimethyl mesobilirubins-XIIIα. , 2012, The journal of physical chemistry. B.

[19]  K. Monde,et al.  Exciton chirality method in vibrational circular dichroism. , 2012, Journal of the American Chemical Society.

[20]  T. Crawford,et al.  Insights on the origin of the unusually large specific rotation of (1S,4S)-norbornenone. , 2014, The journal of physical chemistry. A.

[21]  G. Longhi,et al.  Experimental and calculated CPL spectra and related spectroscopic data of camphor and other simple chiral bicyclic ketones. , 2013, Chirality.

[22]  M. Frisch,et al.  Determination of absolute configuration using concerted ab Initio DFT calculations of electronic circular dichroism and optical rotation: bicyclo[3.3.1]nonane diones. , 2004, The Journal of organic chemistry.

[23]  J. Autschbach,et al.  Analysis of Optical Activity in Terms of Bonds and Lone-Pairs: The Exceptionally Large Optical Rotation of Norbornenone. , 2012, Journal of chemical theory and computation.

[24]  P. Polavarapu,et al.  Determination of the Absolute Configurations Using Exciton Chirality Method for Vibrational Circular Dichroism: Right Answers for the Wrong Reasons? , 2015, The journal of physical chemistry. A.