Effect of Data Normalization on the Creation of Neuro-Probabilistic Atlases

In the past 15 years, rapid improvements in imaging technology and methodology have had a tremendous impact on how we study the human brain. During deep brain stimulation surgeries, detailed anatomical images can be combined with physiological data obtained by microelectrode recordings and microstimulations to address questions relating to the location of specific motor or sensorial functions. The main advantage of techniques such as microelectrode recordings and microstimulations over brain imaging is their ability to localize patient physiological activity with a high degree of spatial resolution. Aggregating data acquired from large populations permits to build what are commonly referred to as statistical atlases. Data points from statistical atlases can be combined to produce probabilistic maps. A crucial step in this process is the intersubject spatial normalization that is required to relate a position in one subject's brain to a position in another subject's brain. In this paper, we study the impact of spatial normalization techniques on building statistical atlases. We find that the Talairach or anterior-posterior commissure coordinate system commonly used in the medical literature produces atlases that are more dispersed than those obtained with normalization methods that rely on nonlinear volumetric image registration. We also find that the maps produced using nonlinear techniques correlate with their expected anatomic positions.

[1]  Mingqiang Yang,et al.  Medical Image Registration Using Thin-Plate Spline for Automatically Detecting and Matching of Point Sets , 2011, 2011 5th International Conference on Bioinformatics and Biomedical Engineering.

[2]  G. Schaltenbrand,et al.  Atlas for Stereotaxy of the Human Brain , 1977 .

[3]  Sébastien Ourselin,et al.  A three-dimensional, histological and deformable atlas of the human basal ganglia. I. Atlas construction based on immunohistochemical and MRI data , 2007, NeuroImage.

[4]  Benoit M. Dawant,et al.  A New Method for Creating Electrophysiological Maps for DBS Surgery and Their Application to Surgical Guidance , 2008, MICCAI.

[5]  Benoit M. Dawant,et al.  Effect of brain shift on the creation of functional atlases for deep brain stimulation surgery , 2010, International Journal of Computer Assisted Radiology and Surgery.

[6]  Benoit M. Dawant,et al.  Accuracy Evaluation of microTargeting Platforms for Deep-Brain Stimulation Using Virtual Targets , 2009, IEEE Transactions on Biomedical Engineering.

[7]  Terry M. Peters,et al.  Automatic Target and Trajectory Identification for Deep Brain Stimulation (DBS) Procedures , 2007, MICCAI.

[8]  Benoit M. Dawant,et al.  Clinical Accuracy of a Customized Stereotactic Platform for Deep Brain Stimulation after Accounting for Brain Shift , 2010, Stereotactic and Functional Neurosurgery.

[9]  Benoit M. Dawant,et al.  Intersurgeon Variability in the Selection of Anterior and Posterior Commissures and Its Potential Effects on Target Localization , 2008, Stereotactic and Functional Neurosurgery.

[10]  Benoit M. Dawant,et al.  Deformable Physiological Atlas-Based Programming of Deep Brain Stimulators: A Feasibility Study , 2006, WBIR.

[11]  Benoit M. Dawant,et al.  Validation of a Fully Automatic Method for the Routine Selection of the Anterior and Posterior Commissures in Magnetic Resonance Images , 2009, Stereotactic and Functional Neurosurgery.

[12]  Guy Marchal,et al.  Multimodality image registration by maximization of mutual information , 1997, IEEE Transactions on Medical Imaging.

[13]  Guy Marchal,et al.  Multi-modality image registration by maximization of mutual information , 1996, Proceedings of the Workshop on Mathematical Methods in Biomedical Image Analysis.

[14]  Colin Studholme,et al.  An overlap invariant entropy measure of 3D medical image alignment , 1999, Pattern Recognit..

[16]  Zhiyu Qiu,et al.  Non-rigid Medical Image Registration Based on the Thin-Plate Spline Algorithm , 2009, 2009 WRI World Congress on Computer Science and Information Engineering.

[17]  Robert E. Gross,et al.  Assessment of Brain Shift Related to Deep Brain Stimulation Surgery , 2007, Stereotactic and Functional Neurosurgery.

[18]  M. Mallar Chakravarty,et al.  Towards a Multi-modal Atlas for Neurosurgical Planning , 2006, MICCAI.

[19]  Shabbar F. Danish,et al.  Brain Shift during Deep Brain Stimulation Surgery for Parkinson’s Disease , 2007, Stereotactic and Functional Neurosurgery.

[20]  Max A. Viergever,et al.  Mutual-information-based registration of medical images: a survey , 2003, IEEE Transactions on Medical Imaging.

[21]  Benoit M. Dawant,et al.  A Method to Correct for Brain Shift When Building Electrophysiological Atlases for Deep Brain Stimulation (DBS) Surgery , 2009, MICCAI.

[22]  Wieslaw L. Nowinski,et al.  A Probabilistic Functional Atlas of the VIM Nucleus Constructed from Pre-, Intra- and Postoperative Electrophysiological and Neuroimaging Data Acquired during the Surgical Treatment of Parkinson’s Disease Patients , 2006, Stereotactic and Functional Neurosurgery.

[23]  Jürgen Weese,et al.  Landmark-based elastic registration using approximating thin-plate splines , 2001, IEEE Transactions on Medical Imaging.

[24]  Fred L. Bookstein,et al.  Principal Warps: Thin-Plate Splines and the Decomposition of Deformations , 1989, IEEE Trans. Pattern Anal. Mach. Intell..

[25]  G. Marchal,et al.  Multi-modal volume registration by maximization of mutual information , 1997 .

[26]  A. Lozano,et al.  Vim thalamic stimulation for tremor. , 2000, Archives of medical research.

[27]  Benoit M. Dawant,et al.  The adaptive bases algorithm for intensity-based nonrigid image registration , 2003, IEEE Transactions on Medical Imaging.

[28]  Wieslaw L. Nowinski,et al.  An Algorithm for Rapid Calculation of a Probabilistic Functional Atlas of Subcortical Structures from Electrophysiological Data Collected during Functional Neurosurgery Procedures , 2003, NeuroImage.