Patterns of Insertion and Deletion in Mammalian Genomes
暂无分享,去创建一个
Shiheng Tao | S. Tao | Yanhui Fan | Wenjuan Wang | Guoji Ma | Lijing Liang | Qi Shi | Yanhui Fan | Qi Shi | Wenjuan Wang | Lijing Liang | Guoji Ma
[1] M T Clegg,et al. Evolution of a noncoding region of the chloroplast genome. , 1993, Molecular phylogenetics and evolution.
[2] H. Maki,et al. Mutational specificity of the dnaE173 mutator associated with a defect in the catalytic subunit of DNA polymerase III of Escherichia coli. , 1991, Journal of molecular biology.
[3] Anna Wetterbom,et al. Comparative Genomic Analysis of Human and Chimpanzee Indicates a Key Role for Indels in Primate Evolution , 2006, Journal of Molecular Evolution.
[4] Reed A. Cartwright,et al. Logarithmic gap costs decrease alignment accuracy , 2006, BMC Bioinformatics.
[5] Mouse Genome Sequencing Consortium. Initial sequencing and comparative analysis of the mouse genome , 2002, Nature.
[6] Xun Gu,et al. The size distribution of insertions and deletions in human and rodent pseudogenes suggests the logarithmic gap penalty for sequence alignment , 1995, Journal of Molecular Evolution.
[7] W. Murphy,et al. Resolution of the Early Placental Mammal Radiation Using Bayesian Phylogenetics , 2001, Science.
[8] Mark Gerstein,et al. Patterns of nucleotide substitution, insertion and deletion in the human genome inferred from pseudogenes. , 2003, Nucleic acids research.
[9] C Sander,et al. Mapping the Protein Universe , 1996, Science.
[10] D. Haussler,et al. Human-mouse alignments with BLASTZ. , 2003, Genome research.
[11] Wilfried W. de Jong,et al. Causes of more frequent deletions than insertions in mutations and protein evolution , 1981, Nature.
[12] D. Haussler,et al. Evolution's cauldron: Duplication, deletion, and rearrangement in the mouse and human genomes , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[13] Martin S. Taylor,et al. Occurrence and consequences of coding sequence insertions and deletions in Mammalian genomes. , 2004, Genome research.
[14] G. Gonnet,et al. Empirical and structural models for insertions and deletions in the divergent evolution of proteins. , 1993, Journal of molecular biology.
[15] Terrence S. Furey,et al. The UCSC Genome Browser Database , 2003, Nucleic Acids Res..
[16] D. Haussler,et al. Aligning multiple genomic sequences with the threaded blockset aligner. , 2004, Genome research.
[17] Tadashi Imanishi,et al. Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[18] N. Saitou,et al. Evolutionary rates of insertion and deletion in noncoding nucleotide sequences of primates. , 1994, Molecular biology and evolution.
[19] B Qian,et al. Distribution of indel lengths , 2001, Proteins.
[20] Lisa M. D'Souza,et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution , 2004, Nature.
[21] R. Britten,et al. Majority of divergence between closely related DNA samples is due to indels , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[22] D Graur,et al. Patterns and rates of indel evolution in processed pseudogenes from humans and murids. , 1997, Gene.
[23] R. Britten,et al. Divergence between samples of chimpanzee and human DNA sequences is 5%, counting indels , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[24] Byungkook Lee,et al. Frequency of gaps observed in a structurally aligned protein pair database suggests a simple gap penalty function. , 2004, Nucleic acids research.
[25] Tim J. P. Hubbard,et al. SCOP: a Structural Classification of Proteins database , 1999, Nucleic Acids Res..
[26] Dan Graur,et al. Deletions in processed pseudogenes accumulate faster in rodents than in humans , 1989, Journal of Molecular Evolution.